RNA–Protein interactions for RNA: ENST00000483617.5

PTPN18-212, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 3

Gene PTPN18, Length 595 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-212ENST00000483617 SPDYE5A6NIY4 337 aa13.58□□□□□ -0.24
PTPN18-212ENST00000483617 RBM25P49756 843 aaKnown RBP13.58□□□□□ -0.24
PTPN18-212ENST00000483617 RGS19P49795 217 aa13.58□□□□□ -0.24
PTPN18-212ENST00000483617 TCP10Q12799 353 aa13.58□□□□□ -0.24
PTPN18-212ENST00000483617 UBE3CQ15386 1083 aa13.58□□□□□ -0.24
PTPN18-212ENST00000483617 ZMYM1Q5SVZ6 1142 aa13.58□□□□□ -0.24
PTPN18-212ENST00000483617 OTUD5Q96G74 571 aa13.58□□□□□ -0.24
PTPN18-212ENST00000483617 MS4A4AQ96JQ5 239 aa13.58□□□□□ -0.24
PTPN18-212ENST00000483617 FAM227BQ96M60 508 aa13.58□□□□□ -0.24
PTPN18-212ENST00000483617 PTPN18Q99952 460 aa13.58□□□□□ -0.24
PTPN18-212ENST00000483617 ZNF341Q9BYN7 854 aa13.58□□□□□ -0.24
PTPN18-212ENST00000483617 PIH1D3Q9NQM4 214 aaKnown RBP13.58□□□□□ -0.24
PTPN18-212ENST00000483617 USP40Q9NVE5 1235 aa13.58□□□□□ -0.24
PTPN18-212ENST00000483617 MYH2Q9UKX2 1941 aa13.58□□□□□ -0.24
PTPN18-212ENST00000483617 CCDC171Q6TFL3 1326 aa13.58□□□□□ -0.24
PTPN18-212ENST00000483617 PDE6AP16499 860 aa13.57□□□□□ -0.24
PTPN18-212ENST00000483617 ZKSCAN1P17029 563 aaPredicted RBP13.57□□□□□ -0.24
PTPN18-212ENST00000483617 ADD2P35612 726 aa13.57□□□□□ -0.24
PTPN18-212ENST00000483617 GTF2A2P52657 109 aa13.57□□□□□ -0.24
PTPN18-212ENST00000483617 GSTO1P78417 241 aa13.57□□□□□ -0.24
PTPN18-212ENST00000483617 CRHR2Q13324 411 aa13.57□□□□□ -0.24
PTPN18-212ENST00000483617 BECN1Q14457 450 aa13.57□□□□□ -0.24
PTPN18-212ENST00000483617 MIGA2Q7L4E1 593 aa13.57□□□□□ -0.24
PTPN18-212ENST00000483617 SLF2Q8IX21 1173 aa13.57□□□□□ -0.24
PTPN18-212ENST00000483617 IL27Q8NEV9 243 aa13.57□□□□□ -0.24
PTPN18-212ENST00000483617 FAM198AQ9UFP1 575 aa13.57□□□□□ -0.24
PTPN18-212ENST00000483617 HPS5Q9UPZ3 1129 aa13.57□□□□□ -0.24
PTPN18-212ENST00000483617 DOCK2Q92608 1830 aa13.56□□□□□ -0.24
PTPN18-212ENST00000483617 CCL15-CCL14A0A0B4J2E2 113 aa13.56□□□□□ -0.24
PTPN18-212ENST00000483617 ANAPC15P60006 121 aa13.56□□□□□ -0.24
PTPN18-212ENST00000483617 MLLT1Q03111 559 aaPredicted RBP13.56□□□□□ -0.24
PTPN18-212ENST00000483617 CCL15Q16663 113 aa13.56□□□□□ -0.24
PTPN18-212ENST00000483617 FBXO46Q6PJ61 603 aaPredicted RBP13.56□□□□□ -0.24
PTPN18-212ENST00000483617 ERO1BQ86YB8 467 aa13.56□□□□□ -0.24
PTPN18-212ENST00000483617 MAGEB6Q8N7X4 407 aa13.56□□□□□ -0.24
PTPN18-212ENST00000483617 BRI3BPQ8WY22 251 aa13.56□□□□□ -0.24
PTPN18-212ENST00000483617 ZKSCAN4Q969J2 545 aaPredicted RBP13.56□□□□□ -0.24
PTPN18-212ENST00000483617 NOL10Q9BSC4 688 aaKnown RBP13.56□□□□□ -0.24
PTPN18-212ENST00000483617 CTNNA3Q9UI47 895 aa13.56□□□□□ -0.24
PTPN18-212ENST00000483617 U3KPZ7 1027 aaPredicted RBP13.56□□□□□ -0.24
PTPN18-212ENST00000483617 MROH7-TTC4A0A0A0MT08 1334 aa13.56□□□□□ -0.24
PTPN18-212ENST00000483617 LDHCP07864 332 aa13.55□□□□□ -0.24
PTPN18-212ENST00000483617 CYP7A1P22680 504 aa13.55□□□□□ -0.24
PTPN18-212ENST00000483617 BTDP43251 543 aa13.55□□□□□ -0.24
PTPN18-212ENST00000483617 MECOMQ03112 1051 aa13.55□□□□□ -0.24
PTPN18-212ENST00000483617 PPIL2Q13356 520 aa13.55□□□□□ -0.24
PTPN18-212ENST00000483617 NAA16Q6N069 864 aaPredicted RBP13.55□□□□□ -0.24
PTPN18-212ENST00000483617 FAM163AQ96GL9 167 aaPredicted RBP13.55□□□□□ -0.24
PTPN18-212ENST00000483617 IDI2Q9BXS1 227 aa13.55□□□□□ -0.24
PTPN18-212ENST00000483617 LSG1Q9H089 658 aaKnown RBP13.55□□□□□ -0.24
PTPN18-212ENST00000483617 ZNF532Q9HCE3 1301 aa13.55□□□□□ -0.24
PTPN18-212ENST00000483617 ATRNL1Q5VV63 1379 aa13.55□□□□□ -0.24
PTPN18-212ENST00000483617 IRF6O14896 467 aa13.54□□□□□ -0.24
PTPN18-212ENST00000483617 ENTPD3O75355 529 aa13.54□□□□□ -0.24
PTPN18-212ENST00000483617 GNAT2P19087 354 aa13.54□□□□□ -0.24
PTPN18-212ENST00000483617 INPP5BP32019 993 aa13.54□□□□□ -0.24
PTPN18-212ENST00000483617 SOX10P56693 466 aa13.54□□□□□ -0.24
PTPN18-212ENST00000483617 SNAPC2Q13487 334 aa13.54□□□□□ -0.24
PTPN18-212ENST00000483617 RABEP1Q15276 862 aa13.54□□□□□ -0.24
PTPN18-212ENST00000483617 CERS3Q8IU89 383 aa13.54□□□□□ -0.24
PTPN18-212ENST00000483617 ZFPM1Q8IX07 1006 aa13.54□□□□□ -0.24
PTPN18-212ENST00000483617 FAM43AQ8N2R8 423 aa13.54□□□□□ -0.24
PTPN18-212ENST00000483617 ERO1AQ96HE7 468 aa13.54□□□□□ -0.24
PTPN18-212ENST00000483617 DSCC1Q9BVC3 393 aa13.54□□□□□ -0.24
PTPN18-212ENST00000483617 ZNF112Q9UJU3 913 aa13.54□□□□□ -0.24
PTPN18-212ENST00000483617 TRIM17Q9Y577 477 aa13.54□□□□□ -0.24
PTPN18-212ENST00000483617 MAST2Q6P0Q8 1798 aa13.53□□□□□ -0.24
PTPN18-212ENST00000483617 MYO5AQ9Y4I1 1855 aaKnown RBP13.53□□□□□ -0.24
PTPN18-212ENST00000483617 GPR75-ASB3A0A0A6YYF3 556 aa13.53□□□□□ -0.24
PTPN18-212ENST00000483617 GPAA1O43292 621 aa13.53□□□□□ -0.24
PTPN18-212ENST00000483617 WDHD1O75717 1129 aaPredicted RBP13.53□□□□□ -0.24
PTPN18-212ENST00000483617 CETPP11597 493 aa13.53□□□□□ -0.24
PTPN18-212ENST00000483617 PPATQ06203 517 aa13.53□□□□□ -0.24
PTPN18-212ENST00000483617 TAF1CQ15572 869 aaPredicted RBP13.53□□□□□ -0.24
PTPN18-212ENST00000483617 NOL9Q5SY16 702 aaKnown RBP13.53□□□□□ -0.24
PTPN18-212ENST00000483617 OTOP1Q7RTM1 612 aa13.53□□□□□ -0.24
PTPN18-212ENST00000483617 ZNF384Q8TF68 577 aa13.53□□□□□ -0.24
PTPN18-212ENST00000483617 MAP4K1Q92918 833 aa13.53□□□□□ -0.24
PTPN18-212ENST00000483617 OSBP2Q969R2 916 aa13.53□□□□□ -0.24
PTPN18-212ENST00000483617 NSUN4Q96CB9 384 aaKnown RBP13.53□□□□□ -0.24
PTPN18-212ENST00000483617 NACAP1Q9BZK3 213 aa13.53□□□□□ -0.24
PTPN18-212ENST00000483617 ZFYVE28Q9HCC9 887 aa13.53□□□□□ -0.24
PTPN18-212ENST00000483617 ZCCHC17Q9NP64 241 aaKnown RBP13.53□□□□□ -0.24
PTPN18-212ENST00000483617 MAGEB6P1A0A0J9YX57 407 aa13.52□□□□□ -0.25
PTPN18-212ENST00000483617 APPP05067 770 aa13.52□□□□□ -0.25
PTPN18-212ENST00000483617 HSPA4P34932 840 aa13.52□□□□□ -0.25
PTPN18-212ENST00000483617 SP3Q02447 781 aa13.52□□□□□ -0.25
PTPN18-212ENST00000483617 PICALMQ13492 652 aa13.52□□□□□ -0.25
PTPN18-212ENST00000483617 KRT32Q14532 448 aa13.52□□□□□ -0.25
PTPN18-212ENST00000483617 CCDC129Q6ZRS4 1044 aa13.52□□□□□ -0.25
PTPN18-212ENST00000483617 SH3BP5LQ7L8J4 393 aa13.52□□□□□ -0.25
PTPN18-212ENST00000483617 ZNF589Q86UQ0 364 aaPredicted RBP13.52□□□□□ -0.25
PTPN18-212ENST00000483617 ZSCAN29Q8IWY8 852 aaPredicted RBP13.52□□□□□ -0.25
PTPN18-212ENST00000483617 CD99L2Q8TCZ2 262 aa13.52□□□□□ -0.25
PTPN18-212ENST00000483617 SEC62Q99442 399 aaKnown RBP13.52□□□□□ -0.25
PTPN18-212ENST00000483617 DDX4Q9NQI0 724 aaKnown RBP13.52□□□□□ -0.25
PTPN18-212ENST00000483617 RBM8AQ9Y5S9 174 aaKnown RBP13.52□□□□□ -0.25
PTPN18-212ENST00000483617 HTTP42858 3142 aa13.52□□□□□ -0.25
PTPN18-212ENST00000483617 TCRBV5S4A2TA0A5A2 114 aa13.51□□□□□ -0.25
PTPN18-212ENST00000483617 BTBD19C9JJ37 291 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms