RNA–Protein interactions for RNA: ENST00000482647.5

SEC13-217, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-217ENST00000482647 DDRGK1Q96HY6 314 aa25.14■■□□□ 1.62
SEC13-217ENST00000482647 STRBPQ96SI9 672 aaKnown RBP25.14■■□□□ 1.62
SEC13-217ENST00000482647 DCP1AQ9NPI6 582 aaPredicted RBP25.14■■□□□ 1.62
SEC13-217ENST00000482647 MCM9Q9NXL9 1143 aa25.14■■□□□ 1.62
SEC13-217ENST00000482647 AK9Q5TCS8 1911 aa25.14■■□□□ 1.61
SEC13-217ENST00000482647 CTNND1O60716 968 aaKnown RBP25.13■■□□□ 1.61
SEC13-217ENST00000482647 POLR3DP05423 398 aaPredicted RBP25.13■■□□□ 1.61
SEC13-217ENST00000482647 SLURP2P0DP57 97 aa25.13■■□□□ 1.61
SEC13-217ENST00000482647 NOL9Q5SY16 702 aaKnown RBP25.13■■□□□ 1.61
SEC13-217ENST00000482647 METTL16Q86W50 562 aaKnown RBP25.13■■□□□ 1.61
SEC13-217ENST00000482647 ERO1BQ86YB8 467 aa25.13■■□□□ 1.61
SEC13-217ENST00000482647 SPDYE5A6NIY4 337 aa25.12■■□□□ 1.61
SEC13-217ENST00000482647 FAM196BA6NMK8 535 aa25.12■■□□□ 1.61
SEC13-217ENST00000482647 HSPA1AP0DMV8 641 aaKnown RBP25.12■■□□□ 1.61
SEC13-217ENST00000482647 HSPA1BP0DMV9 641 aaKnown RBP25.12■■□□□ 1.61
SEC13-217ENST00000482647 SLC4A8Q2Y0W8 1093 aa25.12■■□□□ 1.61
SEC13-217ENST00000482647 ZMYM1Q5SVZ6 1142 aa25.12■■□□□ 1.61
SEC13-217ENST00000482647 SCYL3Q8IZE3 742 aa25.12■■□□□ 1.61
SEC13-217ENST00000482647 PICK1Q9NRD5 415 aa25.12■■□□□ 1.61
SEC13-217ENST00000482647 MANSC4A6NHS7 340 aaPredicted RBP25.11■■□□□ 1.61
SEC13-217ENST00000482647 M0R2C6 588 aa25.11■■□□□ 1.61
SEC13-217ENST00000482647 GPAA1O43292 621 aa25.11■■□□□ 1.61
SEC13-217ENST00000482647 GNAT2P19087 354 aa25.11■■□□□ 1.61
SEC13-217ENST00000482647 INHBEP58166 350 aa25.11■■□□□ 1.61
SEC13-217ENST00000482647 SREBF2Q12772 1141 aa25.11■■□□□ 1.61
SEC13-217ENST00000482647 OTUD5Q96G74 571 aa25.11■■□□□ 1.61
SEC13-217ENST00000482647 EHD4Q9H223 541 aa25.11■■□□□ 1.61
SEC13-217ENST00000482647 SERPINB13Q9UIV8 391 aa25.11■■□□□ 1.61
SEC13-217ENST00000482647 GJA5P36382 358 aa25.1■■□□□ 1.61
SEC13-217ENST00000482647 TM4SF4P48230 202 aa25.1■■□□□ 1.61
SEC13-217ENST00000482647 PPATQ06203 517 aa25.1■■□□□ 1.61
SEC13-217ENST00000482647 ERICH6BQ5W0A0 696 aa25.1■■□□□ 1.61
SEC13-217ENST00000482647 AMOTL1Q8IY63 956 aa25.1■■□□□ 1.61
SEC13-217ENST00000482647 CNKSR2Q8WXI2 1034 aa25.1■■□□□ 1.61
SEC13-217ENST00000482647 PLCD1P51178 756 aa25.09■■□□□ 1.61
SEC13-217ENST00000482647 SEC62Q99442 399 aaKnown RBP25.09■■□□□ 1.61
SEC13-217ENST00000482647 THSD7BQ9C0I4 1608 aa25.08■■□□□ 1.61
SEC13-217ENST00000482647 CA12O43570 354 aa25.08■■□□□ 1.61
SEC13-217ENST00000482647 PPIL2Q13356 520 aa25.08■■□□□ 1.61
SEC13-217ENST00000482647 TTC22Q5TAA0 569 aa25.08■■□□□ 1.61
SEC13-217ENST00000482647 GIMAP6Q6P9H5 292 aa25.08■■□□□ 1.61
SEC13-217ENST00000482647 HELLSQ9NRZ9 838 aa25.08■■□□□ 1.61
SEC13-217ENST00000482647 PATL2C9JE40 543 aaKnown RBP25.07■■□□□ 1.6
SEC13-217ENST00000482647 CAP2P40123 477 aa25.07■■□□□ 1.6
SEC13-217ENST00000482647 GTF2A2P52657 109 aa25.07■■□□□ 1.6
SEC13-217ENST00000482647 DNAJC18Q9H819 358 aa25.07■■□□□ 1.6
SEC13-217ENST00000482647 TAOK2Q9UL54 1235 aa25.07■■□□□ 1.6
SEC13-217ENST00000482647 GSG1L2A8MUP6 293 aa25.06■■□□□ 1.6
SEC13-217ENST00000482647 USP17L12C9JPN9 530 aa25.06■■□□□ 1.6
SEC13-217ENST00000482647 USP17L21D6R901 530 aa25.06■■□□□ 1.6
SEC13-217ENST00000482647 IRF6O14896 467 aa25.06■■□□□ 1.6
SEC13-217ENST00000482647 APPP05067 770 aa25.06■■□□□ 1.6
SEC13-217ENST00000482647 PTPRAP18433 802 aa25.06■■□□□ 1.6
SEC13-217ENST00000482647 SDSP20132 328 aa25.06■■□□□ 1.6
SEC13-217ENST00000482647 MYH7P12883 1935 aa25.06■■□□□ 1.6
SEC13-217ENST00000482647 FOCADQ5VW36 1801 aa25.05■■□□□ 1.6
SEC13-217ENST00000482647 HIP1O00291 1037 aa25.05■■□□□ 1.6
SEC13-217ENST00000482647 SNAPC2Q13487 334 aa25.05■■□□□ 1.6
SEC13-217ENST00000482647 MCMDC2Q4G0Z9 681 aa25.05■■□□□ 1.6
SEC13-217ENST00000482647 C12orf60Q5U649 245 aa25.05■■□□□ 1.6
SEC13-217ENST00000482647 TATDN1Q6P1N9 297 aa25.05■■□□□ 1.6
SEC13-217ENST00000482647 MS4A4AQ96JQ5 239 aa25.05■■□□□ 1.6
SEC13-217ENST00000482647 NACAP1Q9BZK3 213 aa25.05■■□□□ 1.6
SEC13-217ENST00000482647 ZHX2Q9Y6X8 837 aa25.05■■□□□ 1.6
SEC13-217ENST00000482647 TESPA1A2RU30 521 aaPredicted RBP25.04■■□□□ 1.6
SEC13-217ENST00000482647 FOXN1O15353 648 aa25.04■■□□□ 1.6
SEC13-217ENST00000482647 CYP2D6P10635 497 aa25.04■■□□□ 1.6
SEC13-217ENST00000482647 RRP1BQ14684 758 aaKnown RBP25.04■■□□□ 1.6
SEC13-217ENST00000482647 CTR9Q6PD62 1173 aa25.04■■□□□ 1.6
SEC13-217ENST00000482647 FAM227BQ96M60 508 aa25.04■■□□□ 1.6
SEC13-217ENST00000482647 GINM1Q9NU53 330 aa25.04■■□□□ 1.6
SEC13-217ENST00000482647 RNF186Q9NXI6 227 aa25.04■■□□□ 1.6
SEC13-217ENST00000482647 SAGE1Q9NXZ1 904 aa25.04■■□□□ 1.6
SEC13-217ENST00000482647 ARPP21Q9UBL0 812 aaPredicted RBP25.04■■□□□ 1.6
SEC13-217ENST00000482647 CDK5RAP2Q96SN8 1893 aa25.04■■□□□ 1.6
SEC13-217ENST00000482647 OTOFQ9HC10 1997 aa25.04■■□□□ 1.6
SEC13-217ENST00000482647 CETPP11597 493 aa25.03■■□□□ 1.6
SEC13-217ENST00000482647 GSPT1P15170 499 aaKnown RBP25.03■■□□□ 1.6
SEC13-217ENST00000482647 CTCFP49711 727 aaPredicted RBP25.03■■□□□ 1.6
SEC13-217ENST00000482647 GABPAQ06546 454 aa25.03■■□□□ 1.6
SEC13-217ENST00000482647 NMIQ13287 307 aaPredicted RBP25.03■■□□□ 1.6
SEC13-217ENST00000482647 OTUD7BQ6GQQ9 843 aa25.03■■□□□ 1.6
SEC13-217ENST00000482647 DIAPH3Q9NSV4 1193 aa25.03■■□□□ 1.6
SEC13-217ENST00000482647 CCL15-CCL14A0A0B4J2E2 113 aa25.02■■□□□ 1.6
SEC13-217ENST00000482647 CXCL11O14625 94 aa25.02■■□□□ 1.6
SEC13-217ENST00000482647 TRPA1O75762 1119 aa25.02■■□□□ 1.6
SEC13-217ENST00000482647 ALDH1A1P00352 501 aa25.02■■□□□ 1.6
SEC13-217ENST00000482647 ASNSP08243 561 aa25.02■■□□□ 1.6
SEC13-217ENST00000482647 TDO2P48775 406 aa25.02■■□□□ 1.6
SEC13-217ENST00000482647 CCL15Q16663 113 aa25.02■■□□□ 1.6
SEC13-217ENST00000482647 SBK1Q52WX2 424 aa25.02■■□□□ 1.6
SEC13-217ENST00000482647 CCDC129Q6ZRS4 1044 aa25.02■■□□□ 1.6
SEC13-217ENST00000482647 IFNL1Q8IU54 200 aa25.02■■□□□ 1.6
SEC13-217ENST00000482647 PPP4R2Q9NY27 417 aa25.02■■□□□ 1.6
SEC13-217ENST00000482647 SWAP70Q9UH65 585 aa25.02■■□□□ 1.6
SEC13-217ENST00000482647 KCNH4Q9UQ05 1017 aa25.02■■□□□ 1.6
SEC13-217ENST00000482647 CYP2D7A0A087X1C5 515 aa25.01■■□□□ 1.59
SEC13-217ENST00000482647 A0A0D9SFI3 127 aa25.01■■□□□ 1.59
SEC13-217ENST00000482647 CERKLQ49MI3 558 aaPredicted RBP25.01■■□□□ 1.59
SEC13-217ENST00000482647 IFNL3Q8IZI9 196 aa25.01■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms