RNA–Protein interactions for RNA: ENST00000482645.1

TRAPPC12-220, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 1,538 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-220ENST00000482645 FGAP02671 866 aa23.74■■□□□ 1.39
TRAPPC12-220ENST00000482645 PTH1RQ03431 593 aa23.74■■□□□ 1.39
TRAPPC12-220ENST00000482645 DCAF15Q66K64 600 aa23.74■■□□□ 1.39
TRAPPC12-220ENST00000482645 DSCC1Q9BVC3 393 aa23.74■■□□□ 1.39
TRAPPC12-220ENST00000482645 GBA2Q9HCG7 927 aaPredicted RBP23.74■■□□□ 1.39
TRAPPC12-220ENST00000482645 ANGEL1Q9UNK9 670 aaKnown RBP23.74■■□□□ 1.39
TRAPPC12-220ENST00000482645 SIPA1L1O43166 1804 aa23.74■■□□□ 1.39
TRAPPC12-220ENST00000482645 C12orf60Q5U649 245 aa23.74■■□□□ 1.39
TRAPPC12-220ENST00000482645 LAMB1P07942 1786 aa23.73■■□□□ 1.39
TRAPPC12-220ENST00000482645 C2orf69Q8N8R5 385 aa23.73■■□□□ 1.39
TRAPPC12-220ENST00000482645 DYNLL2Q96FJ2 89 aa23.73■■□□□ 1.39
TRAPPC12-220ENST00000482645 SERPINB13Q9UIV8 391 aa23.73■■□□□ 1.39
TRAPPC12-220ENST00000482645 REC8O95072 547 aa23.72■■□□□ 1.39
TRAPPC12-220ENST00000482645 HAND2P61296 217 aa23.72■■□□□ 1.39
TRAPPC12-220ENST00000482645 SBK1Q52WX2 424 aa23.72■■□□□ 1.39
TRAPPC12-220ENST00000482645 ARMC9Q7Z3E5 817 aa23.72■■□□□ 1.39
TRAPPC12-220ENST00000482645 ZNF341Q9BYN7 854 aa23.72■■□□□ 1.39
TRAPPC12-220ENST00000482645 PPARAQ07869 468 aa23.71■■□□□ 1.39
TRAPPC12-220ENST00000482645 ALX1Q15699 326 aa23.71■■□□□ 1.39
TRAPPC12-220ENST00000482645 FOXP4Q8IVH2 680 aaPredicted RBP23.71■■□□□ 1.39
TRAPPC12-220ENST00000482645 WRNIP1Q96S55 665 aa23.71■■□□□ 1.39
TRAPPC12-220ENST00000482645 HERC5Q9UII4 1024 aaKnown RBP23.71■■□□□ 1.39
TRAPPC12-220ENST00000482645 PAPPA2Q9BXP8 1791 aa23.7■■□□□ 1.39
TRAPPC12-220ENST00000482645 TMEM88BA6NKF7 163 aa23.7■■□□□ 1.38
TRAPPC12-220ENST00000482645 UBE2Q2LH0YL09 131 aa23.7■■□□□ 1.38
TRAPPC12-220ENST00000482645 USP2O75604 605 aaPredicted RBP23.7■■□□□ 1.38
TRAPPC12-220ENST00000482645 SLC44A5Q8NCS7 719 aa23.7■■□□□ 1.38
TRAPPC12-220ENST00000482645 LSG1Q9H089 658 aaKnown RBP23.7■■□□□ 1.38
TRAPPC12-220ENST00000482645 EHD4Q9H223 541 aa23.7■■□□□ 1.38
TRAPPC12-220ENST00000482645 DNAJC18Q9H819 358 aa23.7■■□□□ 1.38
TRAPPC12-220ENST00000482645 ABT1Q9ULW3 272 aaKnown RBP23.7■■□□□ 1.38
TRAPPC12-220ENST00000482645 EIF5BO60841 1220 aaKnown RBP23.69■■□□□ 1.38
TRAPPC12-220ENST00000482645 IREB2P48200 963 aaKnown RBP23.69■■□□□ 1.38
TRAPPC12-220ENST00000482645 APLP1P51693 650 aa23.69■■□□□ 1.38
TRAPPC12-220ENST00000482645 C1QTNF8P60827 252 aa23.69■■□□□ 1.38
TRAPPC12-220ENST00000482645 CTDSPL2Q05D32 466 aa23.69■■□□□ 1.38
TRAPPC12-220ENST00000482645 ZMYM6O95789 1325 aa23.69■■□□□ 1.38
TRAPPC12-220ENST00000482645 TBC1D12O60347 775 aa23.69■■□□□ 1.38
TRAPPC12-220ENST00000482645 UPF2Q9HAU5 1272 aaKnown RBP23.69■■□□□ 1.38
TRAPPC12-220ENST00000482645 CTNNA3Q9UI47 895 aa23.69■■□□□ 1.38
TRAPPC12-220ENST00000482645 ZNF213O14771 459 aa23.68■■□□□ 1.38
TRAPPC12-220ENST00000482645 FKBP1BP68106 108 aa23.68■■□□□ 1.38
TRAPPC12-220ENST00000482645 MAP4K1Q92918 833 aa23.68■■□□□ 1.38
TRAPPC12-220ENST00000482645 KLRG1Q96E93 195 aa23.68■■□□□ 1.38
TRAPPC12-220ENST00000482645 RBM8AQ9Y5S9 174 aaKnown RBP23.68■■□□□ 1.38
TRAPPC12-220ENST00000482645 U3KPZ7 1027 aaPredicted RBP23.68■■□□□ 1.38
TRAPPC12-220ENST00000482645 SLC3A2P08195 630 aaKnown RBP23.67■■□□□ 1.38
TRAPPC12-220ENST00000482645 INPP5BP32019 993 aa23.67■■□□□ 1.38
TRAPPC12-220ENST00000482645 HUNKP57058 714 aa23.67■■□□□ 1.38
TRAPPC12-220ENST00000482645 GABPAQ06546 454 aa23.67■■□□□ 1.38
TRAPPC12-220ENST00000482645 IMMTQ16891 758 aaKnown RBP23.67■■□□□ 1.38
TRAPPC12-220ENST00000482645 ZKSCAN4Q969J2 545 aaPredicted RBP23.67■■□□□ 1.38
TRAPPC12-220ENST00000482645 LAMA4Q16363 1823 aa23.67■■□□□ 1.38
TRAPPC12-220ENST00000482645 PRDM1O75626 825 aa23.66■■□□□ 1.38
TRAPPC12-220ENST00000482645 MAP3K10Q02779 954 aa23.66■■□□□ 1.38
TRAPPC12-220ENST00000482645 C16orf86Q6ZW13 317 aa23.66■■□□□ 1.38
TRAPPC12-220ENST00000482645 METTL16Q86W50 562 aaKnown RBP23.66■■□□□ 1.38
TRAPPC12-220ENST00000482645 MKNK2Q9HBH9 465 aa23.66■■□□□ 1.38
TRAPPC12-220ENST00000482645 SWAP70Q9UH65 585 aa23.66■■□□□ 1.38
TRAPPC12-220ENST00000482645 OTOFQ9HC10 1997 aa23.66■■□□□ 1.38
TRAPPC12-220ENST00000482645 MYH8P13535 1937 aa23.66■■□□□ 1.38
TRAPPC12-220ENST00000482645 ROBO3Q96MS0 1386 aa23.65■■□□□ 1.38
TRAPPC12-220ENST00000482645 PHF20L1A8MW92 1017 aa23.65■■□□□ 1.38
TRAPPC12-220ENST00000482645 GDF11O95390 407 aa23.65■■□□□ 1.38
TRAPPC12-220ENST00000482645 SHMT1P34896 483 aa23.65■■□□□ 1.38
TRAPPC12-220ENST00000482645 CDK8P49336 464 aa23.65■■□□□ 1.38
TRAPPC12-220ENST00000482645 SAPCD2Q86UD0 394 aa23.65■■□□□ 1.38
TRAPPC12-220ENST00000482645 DDX55Q8NHQ9 600 aaKnown RBP eCLIP23.65■■□□□ 1.38
TRAPPC12-220ENST00000482645 CSADQ9Y600 493 aa23.65■■□□□ 1.38
TRAPPC12-220ENST00000482645 MAP3K9P80192 1104 aa23.64■■□□□ 1.38
TRAPPC12-220ENST00000482645 MAP3K11Q16584 847 aa23.64■■□□□ 1.38
TRAPPC12-220ENST00000482645 ANKRD13AQ8IZ07 590 aa23.64■■□□□ 1.38
TRAPPC12-220ENST00000482645 CLMNQ96JQ2 1002 aa23.64■■□□□ 1.38
TRAPPC12-220ENST00000482645 INCENPQ9NQS7 918 aa23.64■■□□□ 1.38
TRAPPC12-220ENST00000482645 TOMM22Q9NS69 142 aa23.64■■□□□ 1.38
TRAPPC12-220ENST00000482645 HTRA3P83110 453 aa23.64■■□□□ 1.37
TRAPPC12-220ENST00000482645 PDE4BQ07343 736 aa23.64■■□□□ 1.37
TRAPPC12-220ENST00000482645 VGLL4Q14135 290 aa23.64■■□□□ 1.37
TRAPPC12-220ENST00000482645 RRP1BQ14684 758 aaKnown RBP23.64■■□□□ 1.37
TRAPPC12-220ENST00000482645 CERKLQ49MI3 558 aaPredicted RBP23.64■■□□□ 1.37
TRAPPC12-220ENST00000482645 PAXIP1Q6ZW49 1069 aaPredicted RBP23.64■■□□□ 1.37
TRAPPC12-220ENST00000482645 CREBZFQ9NS37 354 aa23.64■■□□□ 1.37
TRAPPC12-220ENST00000482645 ANAPC4Q9UJX5 808 aa23.64■■□□□ 1.37
TRAPPC12-220ENST00000482645 TLL2Q9Y6L7 1015 aa23.64■■□□□ 1.37
TRAPPC12-220ENST00000482645 MPHOSPH10O00566 681 aaKnown RBP23.63■■□□□ 1.37
TRAPPC12-220ENST00000482645 SHROOM1Q2M3G4 852 aaPredicted RBP23.63■■□□□ 1.37
TRAPPC12-220ENST00000482645 TATDN1Q6P1N9 297 aa23.63■■□□□ 1.37
TRAPPC12-220ENST00000482645 PPP1R3FQ6ZSY5 799 aaPredicted RBP23.63■■□□□ 1.37
TRAPPC12-220ENST00000482645 TBC1D10CQ8IV04 446 aa23.63■■□□□ 1.37
TRAPPC12-220ENST00000482645 NBPF3Q9H094 633 aa23.63■■□□□ 1.37
TRAPPC12-220ENST00000482645 ELP3Q9H9T3 547 aa23.63■■□□□ 1.37
TRAPPC12-220ENST00000482645 ZNF112Q9UJU3 913 aa23.63■■□□□ 1.37
TRAPPC12-220ENST00000482645 CYP21A2P08686 494 aa23.62■■□□□ 1.37
TRAPPC12-220ENST00000482645 RRP12Q5JTH9 1297 aaKnown RBP23.62■■□□□ 1.37
TRAPPC12-220ENST00000482645 LDLRAD1Q5T700 205 aa23.62■■□□□ 1.37
TRAPPC12-220ENST00000482645 USP26Q9BXU7 913 aa23.62■■□□□ 1.37
TRAPPC12-220ENST00000482645 ZNF287Q9HBT7 754 aa23.62■■□□□ 1.37
TRAPPC12-220ENST00000482645 FRMD4AQ9P2Q2 1039 aaPredicted RBP23.62■■□□□ 1.37
TRAPPC12-220ENST00000482645 CTNND1O60716 968 aaKnown RBP23.61■■□□□ 1.37
TRAPPC12-220ENST00000482645 CAP2P40123 477 aa23.61■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 132.9 ms