RNA–Protein interactions for RNA: ENST00000482162.1

TMEM39A-207, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 554 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-207ENST00000482162 CERS3Q8IU89 383 aa11.88□□□□□ -0.51
TMEM39A-207ENST00000482162 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.88□□□□□ -0.51
TMEM39A-207ENST00000482162 KIF1BPQ96EK5 621 aa11.88□□□□□ -0.51
TMEM39A-207ENST00000482162 TBC1D2Q9BYX2 928 aa11.88□□□□□ -0.51
TMEM39A-207ENST00000482162 CHMP4BQ9H444 224 aaKnown RBP11.88□□□□□ -0.51
TMEM39A-207ENST00000482162 ANTXR1Q9H6X2 564 aa11.88□□□□□ -0.51
TMEM39A-207ENST00000482162 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.88□□□□□ -0.51
TMEM39A-207ENST00000482162 AATFQ9NY61 560 aaKnown RBP eCLIP11.88□□□□□ -0.51
TMEM39A-207ENST00000482162 FAM196BA6NMK8 535 aa11.87□□□□□ -0.51
TMEM39A-207ENST00000482162 HMMRO75330 724 aa11.87□□□□□ -0.51
TMEM39A-207ENST00000482162 CYP7A1P22680 504 aa11.87□□□□□ -0.51
TMEM39A-207ENST00000482162 PRMT2P55345 433 aa11.87□□□□□ -0.51
TMEM39A-207ENST00000482162 SH3D19Q5HYK7 790 aa11.87□□□□□ -0.51
TMEM39A-207ENST00000482162 TGFBRAP1Q8WUH2 860 aa11.87□□□□□ -0.51
TMEM39A-207ENST00000482162 ZNF333Q96JL9 665 aa11.87□□□□□ -0.51
TMEM39A-207ENST00000482162 WDR18Q9BV38 432 aa11.87□□□□□ -0.51
TMEM39A-207ENST00000482162 ARHGAP39Q9C0H5 1083 aa11.87□□□□□ -0.51
TMEM39A-207ENST00000482162 DNAJC18Q9H819 358 aa11.87□□□□□ -0.51
TMEM39A-207ENST00000482162 CPA4Q9UI42 421 aa11.87□□□□□ -0.51
TMEM39A-207ENST00000482162 PHIPQ8WWQ0 1821 aa11.87□□□□□ -0.51
TMEM39A-207ENST00000482162 FLT1P17948 1338 aa11.86□□□□□ -0.51
TMEM39A-207ENST00000482162 POTEFA5A3E0 1075 aa11.86□□□□□ -0.51
TMEM39A-207ENST00000482162 CYP2C8P10632 490 aa11.86□□□□□ -0.51
TMEM39A-207ENST00000482162 JAG1P78504 1218 aa11.86□□□□□ -0.51
TMEM39A-207ENST00000482162 C20orf194Q5TEA3 1177 aa11.86□□□□□ -0.51
TMEM39A-207ENST00000482162 CLASRPQ8N2M8 674 aaKnown RBP11.86□□□□□ -0.51
TMEM39A-207ENST00000482162 ZNF280CQ8ND82 737 aa11.86□□□□□ -0.51
TMEM39A-207ENST00000482162 TRIM47Q96LD4 638 aa11.86□□□□□ -0.51
TMEM39A-207ENST00000482162 PARK7Q99497 189 aaKnown RBP11.86□□□□□ -0.51
TMEM39A-207ENST00000482162 NOL10Q9BSC4 688 aaKnown RBP11.86□□□□□ -0.51
TMEM39A-207ENST00000482162 IL1RAPL2Q9NP60 686 aa11.86□□□□□ -0.51
TMEM39A-207ENST00000482162 GINM1Q9NU53 330 aa11.86□□□□□ -0.51
TMEM39A-207ENST00000482162 PTCH2Q9Y6C5 1203 aa11.86□□□□□ -0.51
TMEM39A-207ENST00000482162 MYO5AQ9Y4I1 1855 aaKnown RBP11.86□□□□□ -0.51
TMEM39A-207ENST00000482162 IDH1O75874 414 aaKnown RBP11.85□□□□□ -0.51
TMEM39A-207ENST00000482162 PSMC4P43686 418 aa11.85□□□□□ -0.51
TMEM39A-207ENST00000482162 DYNLL1P63167 89 aaKnown RBP11.85□□□□□ -0.51
TMEM39A-207ENST00000482162 MAP3K12Q12852 859 aa11.85□□□□□ -0.51
TMEM39A-207ENST00000482162 SPP2Q13103 211 aa11.85□□□□□ -0.51
TMEM39A-207ENST00000482162 KIF22Q14807 665 aa11.85□□□□□ -0.51
TMEM39A-207ENST00000482162 CCDC84Q86UT8 332 aaPredicted RBP11.85□□□□□ -0.51
TMEM39A-207ENST00000482162 MAPKAPK5Q8IW41 473 aa11.85□□□□□ -0.51
TMEM39A-207ENST00000482162 MAGEB6Q8N7X4 407 aa11.85□□□□□ -0.51
TMEM39A-207ENST00000482162 PROCA1Q8NCQ7 364 aaPredicted RBP11.85□□□□□ -0.51
TMEM39A-207ENST00000482162 RIOK1Q9BRS2 568 aaKnown RBP11.85□□□□□ -0.51
TMEM39A-207ENST00000482162 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.85□□□□□ -0.51
TMEM39A-207ENST00000482162 SRRDQ9UH36 339 aa11.85□□□□□ -0.51
TMEM39A-207ENST00000482162 PALD1Q9ULE6 856 aa11.85□□□□□ -0.51
TMEM39A-207ENST00000482162 AGTPBP1Q9UPW5 1226 aa11.85□□□□□ -0.51
TMEM39A-207ENST00000482162 NDUFB9Q9Y6M9 179 aa11.85□□□□□ -0.51
TMEM39A-207ENST00000482162 PTPRFP10586 1907 aa11.85□□□□□ -0.51
TMEM39A-207ENST00000482162 DOCK1Q14185 1865 aa11.85□□□□□ -0.51
TMEM39A-207ENST00000482162 MAST2Q6P0Q8 1798 aa11.84□□□□□ -0.51
TMEM39A-207ENST00000482162 SIPA1L1O43166 1804 aa11.84□□□□□ -0.51
TMEM39A-207ENST00000482162 TCRBV5S4A2TA0A5A2 114 aa11.84□□□□□ -0.51
TMEM39A-207ENST00000482162 TRIM75PA6NK02 468 aa11.84□□□□□ -0.51
TMEM39A-207ENST00000482162 USP17L5A8MUK1 530 aa11.84□□□□□ -0.51
TMEM39A-207ENST00000482162 ASNSP08243 561 aa11.84□□□□□ -0.51
TMEM39A-207ENST00000482162 ATP5JP18859 108 aa11.84□□□□□ -0.51
TMEM39A-207ENST00000482162 TTF1Q15361 905 aaPredicted RBP11.84□□□□□ -0.51
TMEM39A-207ENST00000482162 TATDN1Q6P1N9 297 aa11.84□□□□□ -0.51
TMEM39A-207ENST00000482162 EHD4Q9H223 541 aa11.84□□□□□ -0.51
TMEM39A-207ENST00000482162 OSBPP22059 807 aa11.83□□□□□ -0.52
TMEM39A-207ENST00000482162 HOXD10P28358 340 aa11.83□□□□□ -0.52
TMEM39A-207ENST00000482162 TREML2Q5T2D2 321 aa11.83□□□□□ -0.52
TMEM39A-207ENST00000482162 PPP4R3CPQ6ZMV5 832 aa11.83□□□□□ -0.52
TMEM39A-207ENST00000482162 NBPF11Q86T75 865 aa11.83□□□□□ -0.52
TMEM39A-207ENST00000482162 FOCADQ5VW36 1801 aa11.83□□□□□ -0.52
TMEM39A-207ENST00000482162 CDK5RAP2Q96SN8 1893 aa11.83□□□□□ -0.52
TMEM39A-207ENST00000482162 C19orf81C9J6K1 198 aa11.82□□□□□ -0.52
TMEM39A-207ENST00000482162 IFIT2P09913 472 aaKnown RBP11.82□□□□□ -0.52
TMEM39A-207ENST00000482162 PDE6AP16499 860 aa11.82□□□□□ -0.52
TMEM39A-207ENST00000482162 HOXA7P31268 230 aaPredicted RBP11.82□□□□□ -0.52
TMEM39A-207ENST00000482162 BACE1P56817 501 aa11.82□□□□□ -0.52
TMEM39A-207ENST00000482162 SLC9C1Q4G0N8 1177 aa11.82□□□□□ -0.52
TMEM39A-207ENST00000482162 SLC9C2Q5TAH2 1124 aa11.82□□□□□ -0.52
TMEM39A-207ENST00000482162 GADL1Q6ZQY3 521 aa11.82□□□□□ -0.52
TMEM39A-207ENST00000482162 MIGA1Q8NAN2 632 aa11.82□□□□□ -0.52
TMEM39A-207ENST00000482162 HAUS7Q99871 368 aa11.82□□□□□ -0.52
TMEM39A-207ENST00000482162 RBBP6Q7Z6E9 1792 aaKnown RBP11.82□□□□□ -0.52
TMEM39A-207ENST00000482162 ZSWIM8A7E2V4 1837 aa11.81□□□□□ -0.52
TMEM39A-207ENST00000482162 EN2P19622 333 aaPredicted RBP11.81□□□□□ -0.52
TMEM39A-207ENST00000482162 GCLCP48506 637 aaPredicted RBP11.81□□□□□ -0.52
TMEM39A-207ENST00000482162 FCGRTP55899 365 aa11.81□□□□□ -0.52
TMEM39A-207ENST00000482162 GABPAQ06546 454 aa11.81□□□□□ -0.52
TMEM39A-207ENST00000482162 IRF5Q13568 498 aa11.81□□□□□ -0.52
TMEM39A-207ENST00000482162 SHROOM1Q2M3G4 852 aaPredicted RBP11.81□□□□□ -0.52
TMEM39A-207ENST00000482162 DCTPP1Q9H773 170 aa11.81□□□□□ -0.52
TMEM39A-207ENST00000482162 AS3MTQ9HBK9 375 aa11.81□□□□□ -0.52
TMEM39A-207ENST00000482162 SAP30BPQ9UHR5 308 aaKnown RBP11.81□□□□□ -0.52
TMEM39A-207ENST00000482162 TAOK2Q9UL54 1235 aa11.81□□□□□ -0.52
TMEM39A-207ENST00000482162 ZBTB21Q9ULJ3 1066 aa11.81□□□□□ -0.52
TMEM39A-207ENST00000482162 GOLIM4O00461 696 aa11.8□□□□□ -0.52
TMEM39A-207ENST00000482162 FMNL1O95466 1100 aaPredicted RBP11.8□□□□□ -0.52
TMEM39A-207ENST00000482162 HLA-DOAP06340 250 aa11.8□□□□□ -0.52
TMEM39A-207ENST00000482162 ADD2P35612 726 aa11.8□□□□□ -0.52
TMEM39A-207ENST00000482162 PLCD1P51178 756 aa11.8□□□□□ -0.52
TMEM39A-207ENST00000482162 HMGCS2P54868 508 aa11.8□□□□□ -0.52
TMEM39A-207ENST00000482162 FAM110CQ1W6H9 321 aa11.8□□□□□ -0.52
TMEM39A-207ENST00000482162 PRPF38BQ5VTL8 546 aaKnown RBP11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms