RNA–Protein interactions for RNA: ENST00000482013.1

GGPS1-205, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 4

Gene GGPS1, Length 470 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-205ENST00000482013 TGFBRAP1Q8WUH2 860 aa13.67□□□□□ -0.22
GGPS1-205ENST00000482013 DDX11Q96FC9 970 aa13.67□□□□□ -0.22
GGPS1-205ENST00000482013 ZSCAN10Q96SZ4 725 aaPredicted RBP13.67□□□□□ -0.22
GGPS1-205ENST00000482013 ORC3Q9UBD5 711 aaPredicted RBP13.67□□□□□ -0.22
GGPS1-205ENST00000482013 TAOK2Q9UL54 1235 aa13.67□□□□□ -0.22
GGPS1-205ENST00000482013 DDX60LQ5H9U9 1706 aaKnown RBP13.67□□□□□ -0.22
GGPS1-205ENST00000482013 PSME4Q14997 1843 aa13.67□□□□□ -0.22
GGPS1-205ENST00000482013 STK36Q9NRP7 1315 aa13.66□□□□□ -0.22
GGPS1-205ENST00000482013 MYH15Q9Y2K3 1946 aa13.66□□□□□ -0.22
GGPS1-205ENST00000482013 RANBP6O60518 1105 aaKnown RBP13.66□□□□□ -0.22
GGPS1-205ENST00000482013 FDPSP14324 419 aaKnown RBP13.66□□□□□ -0.22
GGPS1-205ENST00000482013 KRT85P78386 507 aa13.66□□□□□ -0.22
GGPS1-205ENST00000482013 DOK7Q18PE1 504 aa13.66□□□□□ -0.22
GGPS1-205ENST00000482013 CCDC93Q567U6 631 aa13.66□□□□□ -0.22
GGPS1-205ENST00000482013 TEX11Q8IYF3 940 aa13.66□□□□□ -0.22
GGPS1-205ENST00000482013 WASF1Q92558 559 aa13.66□□□□□ -0.22
GGPS1-205ENST00000482013 PSMD1Q99460 953 aa13.66□□□□□ -0.22
GGPS1-205ENST00000482013 SCAND2PQ9GZW5 306 aaPredicted RBP13.66□□□□□ -0.22
GGPS1-205ENST00000482013 TCP11L1Q9NUJ3 509 aa13.66□□□□□ -0.22
GGPS1-205ENST00000482013 DAGLAQ9Y4D2 1042 aa13.66□□□□□ -0.22
GGPS1-205ENST00000482013 ZNF646O15015 1829 aaPredicted RBP13.66□□□□□ -0.22
GGPS1-205ENST00000482013 TNKSO95271 1327 aa13.65□□□□□ -0.22
GGPS1-205ENST00000482013 CYP2D7A0A087X1C5 515 aa13.65□□□□□ -0.22
GGPS1-205ENST00000482013 USP17L3A6NCW0 530 aa13.65□□□□□ -0.22
GGPS1-205ENST00000482013 USP17L4A6NCW7 530 aa13.65□□□□□ -0.22
GGPS1-205ENST00000482013 ECE2O60344 883 aa13.65□□□□□ -0.22
GGPS1-205ENST00000482013 POLR3DP05423 398 aaPredicted RBP13.65□□□□□ -0.22
GGPS1-205ENST00000482013 USP17L8P0C7I0 530 aa13.65□□□□□ -0.22
GGPS1-205ENST00000482013 IFNAR1P17181 557 aa13.65□□□□□ -0.22
GGPS1-205ENST00000482013 POLD1P28340 1107 aa13.65□□□□□ -0.22
GGPS1-205ENST00000482013 RESTQ13127 1097 aa13.65□□□□□ -0.22
GGPS1-205ENST00000482013 NTRK3Q16288 839 aa13.65□□□□□ -0.22
GGPS1-205ENST00000482013 USP17L1Q7RTZ2 530 aa13.65□□□□□ -0.22
GGPS1-205ENST00000482013 USP48Q86UV5 1035 aa13.65□□□□□ -0.22
GGPS1-205ENST00000482013 ZNF654Q8IZM8 581 aa13.65□□□□□ -0.22
GGPS1-205ENST00000482013 CERS5Q8N5B7 392 aa13.65□□□□□ -0.22
GGPS1-205ENST00000482013 ANKS1AQ92625 1134 aa13.65□□□□□ -0.22
GGPS1-205ENST00000482013 TEKT1Q969V4 418 aa13.65□□□□□ -0.22
GGPS1-205ENST00000482013 TTF2Q9UNY4 1162 aaKnown RBP13.65□□□□□ -0.22
GGPS1-205ENST00000482013 ELP1O95163 1332 aa13.64□□□□□ -0.23
GGPS1-205ENST00000482013 ECM29Q5VYK3 1845 aa13.64□□□□□ -0.23
GGPS1-205ENST00000482013 DDAH1O94760 285 aa13.64□□□□□ -0.23
GGPS1-205ENST00000482013 KCNA3P22001 575 aa13.64□□□□□ -0.23
GGPS1-205ENST00000482013 CDC27P30260 824 aa13.64□□□□□ -0.23
GGPS1-205ENST00000482013 IARSP41252 1262 aaKnown RBP13.64□□□□□ -0.23
GGPS1-205ENST00000482013 SSRP1Q08945 709 aaKnown RBP13.64□□□□□ -0.23
GGPS1-205ENST00000482013 RTN1Q16799 776 aa13.64□□□□□ -0.23
GGPS1-205ENST00000482013 IFIT1BQ5T764 474 aaKnown RBP13.64□□□□□ -0.23
GGPS1-205ENST00000482013 ILDR2Q71H61 639 aa13.64□□□□□ -0.23
GGPS1-205ENST00000482013 CATIPQ7Z7H3 387 aa13.64□□□□□ -0.23
GGPS1-205ENST00000482013 DGKHQ86XP1 1220 aa13.64□□□□□ -0.23
GGPS1-205ENST00000482013 FANCBQ8NB91 859 aa13.64□□□□□ -0.23
GGPS1-205ENST00000482013 MAP3K14Q99558 947 aa13.64□□□□□ -0.23
GGPS1-205ENST00000482013 PDGFDQ9GZP0 370 aaPredicted RBP13.64□□□□□ -0.23
GGPS1-205ENST00000482013 MTFR1LQ9H019 292 aa13.64□□□□□ -0.23
GGPS1-205ENST00000482013 SENP2Q9HC62 589 aa13.64□□□□□ -0.23
GGPS1-205ENST00000482013 FAM217BQ9NTX9 383 aaPredicted RBP13.64□□□□□ -0.23
GGPS1-205ENST00000482013 RBM28Q9NW13 759 aaKnown RBP13.64□□□□□ -0.23
GGPS1-205ENST00000482013 TSPY2A6NKD2 308 aa13.63□□□□□ -0.23
GGPS1-205ENST00000482013 NPM3O75607 178 aaKnown RBP13.63□□□□□ -0.23
GGPS1-205ENST00000482013 FMNL1O95466 1100 aaPredicted RBP13.63□□□□□ -0.23
GGPS1-205ENST00000482013 DPEP1P16444 411 aa13.63□□□□□ -0.23
GGPS1-205ENST00000482013 ADD1P35611 737 aaKnown RBP13.63□□□□□ -0.23
GGPS1-205ENST00000482013 DEKP35659 375 aaKnown RBP13.63□□□□□ -0.23
GGPS1-205ENST00000482013 UBE2HP62256 183 aa13.63□□□□□ -0.23
GGPS1-205ENST00000482013 DNM1Q05193 864 aaKnown RBP13.63□□□□□ -0.23
GGPS1-205ENST00000482013 DACT2Q5SW24 774 aa13.63□□□□□ -0.23
GGPS1-205ENST00000482013 C16orf86Q6ZW13 317 aa13.63□□□□□ -0.23
GGPS1-205ENST00000482013 TTC6Q86TZ1 520 aa13.63□□□□□ -0.23
GGPS1-205ENST00000482013 MICU3Q86XE3 530 aa13.63□□□□□ -0.23
GGPS1-205ENST00000482013 ZNF444Q8N0Y2 327 aaPredicted RBP13.63□□□□□ -0.23
GGPS1-205ENST00000482013 ENAHQ8N8S7 591 aaPredicted RBP13.63□□□□□ -0.23
GGPS1-205ENST00000482013 FBXO18Q8NFZ0 1043 aa13.63□□□□□ -0.23
GGPS1-205ENST00000482013 FBXW7Q969H0 707 aa13.63□□□□□ -0.23
GGPS1-205ENST00000482013 C8orf76Q96K31 380 aa13.63□□□□□ -0.23
GGPS1-205ENST00000482013 ZDHHC15Q96MV8 337 aa13.63□□□□□ -0.23
GGPS1-205ENST00000482013 ZKSCAN3Q9BRR0 538 aa13.63□□□□□ -0.23
GGPS1-205ENST00000482013 DBNDD1Q9H9R9 158 aa13.63□□□□□ -0.23
GGPS1-205ENST00000482013 CFAP45Q9UL16 551 aa13.63□□□□□ -0.23
GGPS1-205ENST00000482013 CNPY2Q9Y2B0 182 aa13.63□□□□□ -0.23
GGPS1-205ENST00000482013 FLT1P17948 1338 aa13.63□□□□□ -0.23
GGPS1-205ENST00000482013 MYO3BQ8WXR4 1341 aa13.63□□□□□ -0.23
GGPS1-205ENST00000482013 SCN9AQ15858 1988 aa13.62□□□□□ -0.23
GGPS1-205ENST00000482013 C21orf2O43822 256 aa13.62□□□□□ -0.23
GGPS1-205ENST00000482013 CYP2D6P10635 497 aa13.62□□□□□ -0.23
GGPS1-205ENST00000482013 BRAPQ7Z569 592 aa13.62□□□□□ -0.23
GGPS1-205ENST00000482013 MAPKAPK5Q8IW41 473 aa13.62□□□□□ -0.23
GGPS1-205ENST00000482013 TRIM22Q8IYM9 498 aa13.62□□□□□ -0.23
GGPS1-205ENST00000482013 SYAP1Q96A49 352 aaPredicted RBP13.62□□□□□ -0.23
GGPS1-205ENST00000482013 ZNF396Q96N95 335 aaPredicted RBP13.62□□□□□ -0.23
GGPS1-205ENST00000482013 MKNK2Q9HBH9 465 aa13.62□□□□□ -0.23
GGPS1-205ENST00000482013 PIM2Q9P1W9 311 aa13.62□□□□□ -0.23
GGPS1-205ENST00000482013 MYH6P13533 1939 aa13.61□□□□□ -0.23
GGPS1-205ENST00000482013 SMIM22K7EJ46 135 aa13.61□□□□□ -0.23
GGPS1-205ENST00000482013 PPIP5K2O43314 1243 aa13.61□□□□□ -0.23
GGPS1-205ENST00000482013 PRDM1O75626 825 aa13.61□□□□□ -0.23
GGPS1-205ENST00000482013 CRKP46108 304 aa13.61□□□□□ -0.23
GGPS1-205ENST00000482013 AOC3Q16853 763 aa13.61□□□□□ -0.23
GGPS1-205ENST00000482013 FERMT3Q86UX7 667 aa13.61□□□□□ -0.23
GGPS1-205ENST00000482013 STK11IPQ8N1F8 1099 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms