RNA–Protein interactions for RNA: ENST00000481131.5

UPF3A-207, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3A, Length 678 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-207ENST00000481131 NTF4P34130 210 aa7.96□□□□□ -1.14
UPF3A-207ENST00000481131 ID3Q02535 119 aa7.96□□□□□ -1.14
UPF3A-207ENST00000481131 TRIM28Q13263 835 aaKnown RBP7.96□□□□□ -1.14
UPF3A-207ENST00000481131 SERINC3Q13530 473 aa7.96□□□□□ -1.14
UPF3A-207ENST00000481131 AKAP4Q5JQC9 854 aa7.96□□□□□ -1.14
UPF3A-207ENST00000481131 IGF2-ASQ6U949 168 aa7.96□□□□□ -1.14
UPF3A-207ENST00000481131 CKAP2LQ8IYA6 745 aa7.96□□□□□ -1.14
UPF3A-207ENST00000481131 PIF1Q9H611 641 aa7.96□□□□□ -1.14
UPF3A-207ENST00000481131 CRIM1Q9NZV1 1036 aa7.96□□□□□ -1.14
UPF3A-207ENST00000481131 REV1Q9UBZ9 1251 aa7.96□□□□□ -1.14
UPF3A-207ENST00000481131 TACC3Q9Y6A5 838 aa7.96□□□□□ -1.14
UPF3A-207ENST00000481131 SHROOM4Q9ULL8 1493 aa7.95□□□□□ -1.14
UPF3A-207ENST00000481131 PRAMEF27A3QJZ7 478 aa7.95□□□□□ -1.14
UPF3A-207ENST00000481131 IMPDH2P12268 514 aa7.95□□□□□ -1.14
UPF3A-207ENST00000481131 GRK4P32298 578 aa7.95□□□□□ -1.14
UPF3A-207ENST00000481131 ERVK-24P63145 666 aa7.95□□□□□ -1.14
UPF3A-207ENST00000481131 PPM1JQ5JR12 505 aa7.95□□□□□ -1.14
UPF3A-207ENST00000481131 RUFY4Q6ZNE9 571 aa7.95□□□□□ -1.14
UPF3A-207ENST00000481131 SMG8Q8ND04 991 aaKnown RBP7.95□□□□□ -1.14
UPF3A-207ENST00000481131 MRPL18Q9H0U6 180 aaKnown RBP7.95□□□□□ -1.14
UPF3A-207ENST00000481131 OSBPL2Q9H1P3 480 aa7.95□□□□□ -1.14
UPF3A-207ENST00000481131 SUGCTQ9HAC7 445 aa7.95□□□□□ -1.14
UPF3A-207ENST00000481131 DISC1Q9NRI5 854 aa7.95□□□□□ -1.14
UPF3A-207ENST00000481131 RAD18Q9NS91 495 aa7.95□□□□□ -1.14
UPF3A-207ENST00000481131 SPDYE3A6NKU9 549 aa7.94□□□□□ -1.14
UPF3A-207ENST00000481131 MEIS3P2A8K0S8 358 aa7.94□□□□□ -1.14
UPF3A-207ENST00000481131 TIAF1O95411 115 aa7.94□□□□□ -1.14
UPF3A-207ENST00000481131 ADH5P11766 374 aa7.94□□□□□ -1.14
UPF3A-207ENST00000481131 DRD2P14416 443 aa7.94□□□□□ -1.14
UPF3A-207ENST00000481131 ITGB7P26010 798 aa7.94□□□□□ -1.14
UPF3A-207ENST00000481131 DOC2BQ14184 412 aa7.94□□□□□ -1.14
UPF3A-207ENST00000481131 ZBTB37Q5TC79 503 aa7.94□□□□□ -1.14
UPF3A-207ENST00000481131 SOGA3Q5TF21 947 aa7.94□□□□□ -1.14
UPF3A-207ENST00000481131 NBPF6Q5VWK0 638 aa7.94□□□□□ -1.14
UPF3A-207ENST00000481131 NUTM2GQ5VZR2 741 aa7.94□□□□□ -1.14
UPF3A-207ENST00000481131 AGGF1Q8N302 714 aaeCLIP7.94□□□□□ -1.14
UPF3A-207ENST00000481131 OR6P1Q8NGX9 317 aa7.94□□□□□ -1.14
UPF3A-207ENST00000481131 NBPF4Q96M43 638 aa7.94□□□□□ -1.14
UPF3A-207ENST00000481131 FANCD2OSQ96PS1 177 aa7.94□□□□□ -1.14
UPF3A-207ENST00000481131 CRBNQ96SW2 442 aa7.94□□□□□ -1.14
UPF3A-207ENST00000481131 RNF208Q9H0X6 261 aa7.94□□□□□ -1.14
UPF3A-207ENST00000481131 TNKS2Q9H2K2 1166 aa7.94□□□□□ -1.14
UPF3A-207ENST00000481131 F8W735 103 aaPredicted RBP7.93□□□□□ -1.14
UPF3A-207ENST00000481131 NEFMP07197 916 aa7.93□□□□□ -1.14
UPF3A-207ENST00000481131 PLCG1P19174 1290 aa7.93□□□□□ -1.14
UPF3A-207ENST00000481131 HNRNPUQ00839 825 aaKnown RBP eCLIP7.93□□□□□ -1.14
UPF3A-207ENST00000481131 RAB33AQ14088 237 aa7.93□□□□□ -1.14
UPF3A-207ENST00000481131 TMEM201Q5SNT2 666 aa7.93□□□□□ -1.14
UPF3A-207ENST00000481131 OVOS1Q6IE37 1185 aa7.93□□□□□ -1.14
UPF3A-207ENST00000481131 GIMAP6Q6P9H5 292 aa7.93□□□□□ -1.14
UPF3A-207ENST00000481131 WNT10AQ9GZT5 417 aa7.93□□□□□ -1.14
UPF3A-207ENST00000481131 SLC22A31A6NKX4 558 aa7.92□□□□□ -1.14
UPF3A-207ENST00000481131 ALX3O95076 343 aa7.92□□□□□ -1.14
UPF3A-207ENST00000481131 SOX4Q06945 474 aaPredicted RBP7.92□□□□□ -1.14
UPF3A-207ENST00000481131 TNNI3KQ59H18 835 aa7.92□□□□□ -1.14
UPF3A-207ENST00000481131 PRRT3Q5FWE3 981 aa7.92□□□□□ -1.14
UPF3A-207ENST00000481131 UBE3DQ7Z6J8 389 aa7.92□□□□□ -1.14
UPF3A-207ENST00000481131 TMEM130Q8N3G9 435 aa7.92□□□□□ -1.14
UPF3A-207ENST00000481131 CELF2-AS1Q8N7Q2 184 aa7.92□□□□□ -1.14
UPF3A-207ENST00000481131 TMEM40Q8WWA1 233 aa7.92□□□□□ -1.14
UPF3A-207ENST00000481131 ACSF2Q96CM8 615 aaPredicted RBP7.92□□□□□ -1.14
UPF3A-207ENST00000481131 GSX1Q9H4S2 264 aaPredicted RBP7.92□□□□□ -1.14
UPF3A-207ENST00000481131 ZSWIM4Q9H7M6 989 aa7.92□□□□□ -1.14
UPF3A-207ENST00000481131 FBRSQ9HAH7 460 aa7.92□□□□□ -1.14
UPF3A-207ENST00000481131 GMIPQ9P107 970 aa7.92□□□□□ -1.14
UPF3A-207ENST00000481131 ADAM30Q9UKF2 790 aa7.92□□□□□ -1.14
UPF3A-207ENST00000481131 AP4E1Q9UPM8 1137 aa7.92□□□□□ -1.14
UPF3A-207ENST00000481131 PGRP06401 933 aa7.91□□□□□ -1.14
UPF3A-207ENST00000481131 ETF1P62495 437 aaKnown RBP7.91□□□□□ -1.14
UPF3A-207ENST00000481131 PDE4BQ07343 736 aa7.91□□□□□ -1.14
UPF3A-207ENST00000481131 BMS1Q14692 1282 aaKnown RBP7.91□□□□□ -1.14
UPF3A-207ENST00000481131 C2CD4AQ8NCU7 369 aaPredicted RBP7.91□□□□□ -1.14
UPF3A-207ENST00000481131 RNF214Q8ND24 703 aa7.91□□□□□ -1.14
UPF3A-207ENST00000481131 ATG4CQ96DT6 458 aa7.91□□□□□ -1.14
UPF3A-207ENST00000481131 CYP4F12Q9HCS2 524 aa7.91□□□□□ -1.14
UPF3A-207ENST00000481131 TJP2Q9UDY2 1190 aa7.91□□□□□ -1.14
UPF3A-207ENST00000481131 CHURC1-FNTBB4DL54 471 aa7.9□□□□□ -1.14
UPF3A-207ENST00000481131 FANCGO15287 622 aa7.9□□□□□ -1.14
UPF3A-207ENST00000481131 ACRP10323 421 aa7.9□□□□□ -1.14
UPF3A-207ENST00000481131 CASP7P55210 303 aa7.9□□□□□ -1.14
UPF3A-207ENST00000481131 TTLL4Q14679 1199 aa7.9□□□□□ -1.14
UPF3A-207ENST00000481131 ATXN3LQ9H3M9 355 aa7.9□□□□□ -1.14
UPF3A-207ENST00000481131 FAM105AQ9NUU6 356 aa7.9□□□□□ -1.14
UPF3A-207ENST00000481131 ACTR10Q9NZ32 417 aa7.9□□□□□ -1.14
UPF3A-207ENST00000481131 ACTL7BQ9Y614 415 aa7.9□□□□□ -1.14
UPF3A-207ENST00000481131 A0A1W2PQH9 124 aa7.89□□□□□ -1.15
UPF3A-207ENST00000481131 UPK3BL1B0FP48 263 aa7.89□□□□□ -1.15
UPF3A-207ENST00000481131 UPK3BL2E5RIL1 263 aa7.89□□□□□ -1.15
UPF3A-207ENST00000481131 HCLS1P14317 486 aaPredicted RBP7.89□□□□□ -1.15
UPF3A-207ENST00000481131 GATA4P43694 442 aa7.89□□□□□ -1.15
UPF3A-207ENST00000481131 ZYXQ15942 572 aaKnown RBP7.89□□□□□ -1.15
UPF3A-207ENST00000481131 NKG7Q16617 165 aa7.89□□□□□ -1.15
UPF3A-207ENST00000481131 LRRFIP1Q32MZ4 808 aaKnown RBP7.89□□□□□ -1.15
UPF3A-207ENST00000481131 Q6ZS46 218 aa7.89□□□□□ -1.15
UPF3A-207ENST00000481131 DYMQ7RTS9 669 aa7.89□□□□□ -1.15
UPF3A-207ENST00000481131 TTC6Q86TZ1 520 aa7.89□□□□□ -1.15
UPF3A-207ENST00000481131 TAB3Q8N5C8 712 aaPredicted RBP7.89□□□□□ -1.15
UPF3A-207ENST00000481131 C19orf47Q8N9M1 422 aaKnown RBP7.89□□□□□ -1.15
UPF3A-207ENST00000481131 C12orf50Q8NA57 414 aaPredicted RBP7.89□□□□□ -1.15
UPF3A-207ENST00000481131 MICAL1Q8TDZ2 1067 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms