RNA–Protein interactions for RNA: ENST00000480563.1

TTC28-206, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 3

Gene TTC28, Length 407 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-206ENST00000480563 OGDHLQ9ULD0 1010 aa14.05□□□□□ -0.16
TTC28-206ENST00000480563 HMGCS2P54868 508 aa14.04□□□□□ -0.16
TTC28-206ENST00000480563 RASGRF1Q13972 1273 aa14.04□□□□□ -0.16
TTC28-206ENST00000480563 UBE2OQ9C0C9 1292 aaKnown RBP14.04□□□□□ -0.16
TTC28-206ENST00000480563 OSBPL5Q9H0X9 879 aaPredicted RBP14.04□□□□□ -0.16
TTC28-206ENST00000480563 ASCC2Q9H1I8 757 aaPredicted RBP14.04□□□□□ -0.16
TTC28-206ENST00000480563 GPR75-ASB3A0A0A6YYF3 556 aa14.03□□□□□ -0.16
TTC28-206ENST00000480563 NPM3O75607 178 aaKnown RBP14.03□□□□□ -0.16
TTC28-206ENST00000480563 UBTFL1P0CB47 393 aaPredicted RBP14.03□□□□□ -0.16
TTC28-206ENST00000480563 RHBDL3P58872 404 aa14.03□□□□□ -0.16
TTC28-206ENST00000480563 TIMM10P62072 90 aa14.03□□□□□ -0.16
TTC28-206ENST00000480563 MECOMQ03112 1051 aa14.03□□□□□ -0.16
TTC28-206ENST00000480563 FAM9BQ8IZU0 186 aa14.03□□□□□ -0.16
TTC28-206ENST00000480563 TRIB2Q92519 343 aa14.03□□□□□ -0.16
TTC28-206ENST00000480563 TBC1D2Q9BYX2 928 aa14.03□□□□□ -0.16
TTC28-206ENST00000480563 MROH7-TTC4A0A0A0MT08 1334 aa14.03□□□□□ -0.16
TTC28-206ENST00000480563 DOCK2Q92608 1830 aa14.03□□□□□ -0.16
TTC28-206ENST00000480563 MYH13Q9UKX3 1938 aa14.03□□□□□ -0.16
TTC28-206ENST00000480563 DOCK3Q8IZD9 2030 aa14.03□□□□□ -0.16
TTC28-206ENST00000480563 ALPK3Q96L96 1907 aa14.02□□□□□ -0.16
TTC28-206ENST00000480563 USP17L5A8MUK1 530 aa14.02□□□□□ -0.17
TTC28-206ENST00000480563 CYP2B6P20813 491 aa14.02□□□□□ -0.17
TTC28-206ENST00000480563 CAP2P40123 477 aa14.02□□□□□ -0.17
TTC28-206ENST00000480563 SH3D19Q5HYK7 790 aa14.02□□□□□ -0.17
TTC28-206ENST00000480563 ERICH6Q7L0X2 663 aa14.02□□□□□ -0.17
TTC28-206ENST00000480563 MORF4L1Q9UBU8 362 aa14.02□□□□□ -0.17
TTC28-206ENST00000480563 PA2G4Q9UQ80 394 aaKnown RBP14.02□□□□□ -0.17
TTC28-206ENST00000480563 PDS5AQ29RF7 1337 aaKnown RBP14.01□□□□□ -0.17
TTC28-206ENST00000480563 ZNF521Q96K83 1311 aa14.01□□□□□ -0.17
TTC28-206ENST00000480563 ANP32CO43423 234 aa14.01□□□□□ -0.17
TTC28-206ENST00000480563 PRKAR2AP13861 404 aaKnown RBP14.01□□□□□ -0.17
TTC28-206ENST00000480563 RRP1BQ14684 758 aaKnown RBP14.01□□□□□ -0.17
TTC28-206ENST00000480563 MAP3K21Q5TCX8 1036 aa14.01□□□□□ -0.17
TTC28-206ENST00000480563 ZNF384Q8TF68 577 aa14.01□□□□□ -0.17
TTC28-206ENST00000480563 PTPRFP10586 1907 aa14.01□□□□□ -0.17
TTC28-206ENST00000480563 DOCK1Q14185 1865 aa14.01□□□□□ -0.17
TTC28-206ENST00000480563 PHIPQ8WWQ0 1821 aa14.01□□□□□ -0.17
TTC28-206ENST00000480563 MYH2Q9UKX2 1941 aa14□□□□□ -0.17
TTC28-206ENST00000480563 PFASO15067 1338 aa14□□□□□ -0.17
TTC28-206ENST00000480563 MAP4K4O95819 1239 aaPredicted RBP14□□□□□ -0.17
TTC28-206ENST00000480563 LDHCP07864 332 aa14□□□□□ -0.17
TTC28-206ENST00000480563 XRCC5P13010 732 aaKnown RBP14□□□□□ -0.17
TTC28-206ENST00000480563 IRX3P78415 501 aaPredicted RBP14□□□□□ -0.17
TTC28-206ENST00000480563 XAGE2Q96GT9 111 aa14□□□□□ -0.17
TTC28-206ENST00000480563 P2RX7Q99572 595 aaKnown RBP14□□□□□ -0.17
TTC28-206ENST00000480563 NUDT12Q9BQG2 462 aa14□□□□□ -0.17
TTC28-206ENST00000480563 AS3MTQ9HBK9 375 aa14□□□□□ -0.17
TTC28-206ENST00000480563 COPRSQ9NQ92 184 aa14□□□□□ -0.17
TTC28-206ENST00000480563 A0A1B0GUL7 405 aa13.99□□□□□ -0.17
TTC28-206ENST00000480563 PEX10O60683 326 aa13.99□□□□□ -0.17
TTC28-206ENST00000480563 COL6A1P12109 1028 aa13.99□□□□□ -0.17
TTC28-206ENST00000480563 GSTO1P78417 241 aa13.99□□□□□ -0.17
TTC28-206ENST00000480563 GPRC5AQ8NFJ5 357 aa13.99□□□□□ -0.17
TTC28-206ENST00000480563 SOCS4Q8WXH5 440 aa13.99□□□□□ -0.17
TTC28-206ENST00000480563 WDR18Q9BV38 432 aa13.99□□□□□ -0.17
TTC28-206ENST00000480563 COL25A1Q9BXS0 654 aaPredicted RBP13.99□□□□□ -0.17
TTC28-206ENST00000480563 TMOD4Q9NZQ9 345 aa13.99□□□□□ -0.17
TTC28-206ENST00000480563 HDAC5Q9UQL6 1122 aa13.99□□□□□ -0.17
TTC28-206ENST00000480563 HOXA7P31268 230 aaPredicted RBP13.98□□□□□ -0.17
TTC28-206ENST00000480563 BACE1P56817 501 aa13.98□□□□□ -0.17
TTC28-206ENST00000480563 MDM2Q00987 491 aaPredicted RBP13.98□□□□□ -0.17
TTC28-206ENST00000480563 CACNB2Q08289 660 aaPredicted RBP13.98□□□□□ -0.17
TTC28-206ENST00000480563 TFCP2Q12800 502 aa13.98□□□□□ -0.17
TTC28-206ENST00000480563 MTMR2Q13614 643 aa13.98□□□□□ -0.17
TTC28-206ENST00000480563 MVPQ14764 893 aaKnown RBP13.98□□□□□ -0.17
TTC28-206ENST00000480563 LRRC26Q2I0M4 334 aa13.98□□□□□ -0.17
TTC28-206ENST00000480563 ALDH1L2Q3SY69 923 aa13.98□□□□□ -0.17
TTC28-206ENST00000480563 TBC1D9Q6ZT07 1266 aa13.98□□□□□ -0.17
TTC28-206ENST00000480563 TRMT44Q8IYL2 757 aaKnown RBP13.98□□□□□ -0.17
TTC28-206ENST00000480563 NSUN4Q96CB9 384 aaKnown RBP13.98□□□□□ -0.17
TTC28-206ENST00000480563 TXNRD2Q9NNW7 524 aa13.98□□□□□ -0.17
TTC28-206ENST00000480563 HMG20BQ9P0W2 317 aa13.98□□□□□ -0.17
TTC28-206ENST00000480563 HERC5Q9UII4 1024 aaKnown RBP13.98□□□□□ -0.17
TTC28-206ENST00000480563 AKAP2Q9Y2D5 859 aa13.98□□□□□ -0.17
TTC28-206ENST00000480563 E9PSI1 815 aa13.97□□□□□ -0.17
TTC28-206ENST00000480563 ZKSCAN1P17029 563 aaPredicted RBP13.97□□□□□ -0.17
TTC28-206ENST00000480563 CCND3P30281 292 aaPredicted RBP13.97□□□□□ -0.17
TTC28-206ENST00000480563 MAPK4P31152 587 aa13.97□□□□□ -0.17
TTC28-206ENST00000480563 HERVK_113P62684 666 aa13.97□□□□□ -0.17
TTC28-206ENST00000480563 PDE3AQ14432 1141 aa13.97□□□□□ -0.17
TTC28-206ENST00000480563 LHX8Q68G74 356 aa13.97□□□□□ -0.17
TTC28-206ENST00000480563 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.97□□□□□ -0.17
TTC28-206ENST00000480563 CCAR1Q8IX12 1150 aaKnown RBP13.97□□□□□ -0.17
TTC28-206ENST00000480563 TEX11Q8IYF3 940 aa13.97□□□□□ -0.17
TTC28-206ENST00000480563 NEUROD6Q96NK8 337 aa13.97□□□□□ -0.17
TTC28-206ENST00000480563 SMC4Q9NTJ3 1288 aa13.97□□□□□ -0.17
TTC28-206ENST00000480563 RAI14Q9P0K7 980 aa13.97□□□□□ -0.17
TTC28-206ENST00000480563 PI4KBQ9UBF8 816 aa13.97□□□□□ -0.17
TTC28-206ENST00000480563 RBPJLQ9UBG7 517 aa13.97□□□□□ -0.17
TTC28-206ENST00000480563 DDX60LQ5H9U9 1706 aaKnown RBP13.97□□□□□ -0.17
TTC28-206ENST00000480563 COL2A1P02458 1487 aaPredicted RBP13.96□□□□□ -0.17
TTC28-206ENST00000480563 POTEB2H3BUK9 544 aa13.96□□□□□ -0.17
TTC28-206ENST00000480563 ASNSP08243 561 aa13.96□□□□□ -0.17
TTC28-206ENST00000480563 CCL14Q16627 93 aa13.96□□□□□ -0.17
TTC28-206ENST00000480563 Q3C1V9 767 aa13.96□□□□□ -0.17
TTC28-206ENST00000480563 SPATA5Q8NB90 893 aa13.96□□□□□ -0.17
TTC28-206ENST00000480563 USP6NLQ92738 828 aa13.96□□□□□ -0.17
TTC28-206ENST00000480563 LOC285556D6RIA3 1793 aa13.96□□□□□ -0.18
TTC28-206ENST00000480563 C19orf81C9J6K1 198 aa13.95□□□□□ -0.18
TTC28-206ENST00000480563 RGS2P41220 211 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms