RNA–Protein interactions for RNA: ENST00000480067.1

CLDN11-205, Transcript of claudin 11, humanhuman

TSL 1 (best)

Gene CLDN11, Length 1,589 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-205ENST00000480067 TBC1D12O60347 775 aa13.31□□□□□ -0.28
CLDN11-205ENST00000480067 HAND2P61296 217 aa13.31□□□□□ -0.28
CLDN11-205ENST00000480067 STK11IPQ8N1F8 1099 aa13.31□□□□□ -0.28
CLDN11-205ENST00000480067 EHD4Q9H223 541 aa13.31□□□□□ -0.28
CLDN11-205ENST00000480067 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.31□□□□□ -0.28
CLDN11-205ENST00000480067 ZNF287Q9HBT7 754 aa13.31□□□□□ -0.28
CLDN11-205ENST00000480067 ECM29Q5VYK3 1845 aa13.3□□□□□ -0.28
CLDN11-205ENST00000480067 EPB41L2O43491 1005 aaKnown RBP13.3□□□□□ -0.28
CLDN11-205ENST00000480067 SEC24BO95487 1268 aa13.3□□□□□ -0.28
CLDN11-205ENST00000480067 FMR1Q06787 632 aaKnown RBP eCLIP13.3□□□□□ -0.28
CLDN11-205ENST00000480067 PRKG1Q13976 671 aa13.3□□□□□ -0.28
CLDN11-205ENST00000480067 TTLL12Q14166 644 aaPredicted RBP13.3□□□□□ -0.28
CLDN11-205ENST00000480067 RNF20Q5VTR2 975 aa13.3□□□□□ -0.28
CLDN11-205ENST00000480067 DYNLL2Q96FJ2 89 aa13.3□□□□□ -0.28
CLDN11-205ENST00000480067 USP26Q9BXU7 913 aa13.3□□□□□ -0.28
CLDN11-205ENST00000480067 MKNK2Q9HBH9 465 aa13.3□□□□□ -0.28
CLDN11-205ENST00000480067 ANAPC4Q9UJX5 808 aa13.3□□□□□ -0.28
CLDN11-205ENST00000480067 TAOK2Q9UL54 1235 aa13.3□□□□□ -0.28
CLDN11-205ENST00000480067 CELF2O95319 508 aaKnown RBP13.29□□□□□ -0.28
CLDN11-205ENST00000480067 MAP3K10Q02779 954 aa13.29□□□□□ -0.28
CLDN11-205ENST00000480067 EVX2Q03828 476 aa13.29□□□□□ -0.28
CLDN11-205ENST00000480067 CTDSPL2Q05D32 466 aa13.29□□□□□ -0.28
CLDN11-205ENST00000480067 PDE4BQ07343 736 aa13.29□□□□□ -0.28
CLDN11-205ENST00000480067 NECTIN1Q15223 517 aa13.29□□□□□ -0.28
CLDN11-205ENST00000480067 METTL16Q86W50 562 aaKnown RBP13.29□□□□□ -0.28
CLDN11-205ENST00000480067 ZNF341Q9BYN7 854 aa13.29□□□□□ -0.28
CLDN11-205ENST00000480067 SWAP70Q9UH65 585 aa13.29□□□□□ -0.28
CLDN11-205ENST00000480067 POLR2AP24928 1970 aaKnown RBP13.29□□□□□ -0.28
CLDN11-205ENST00000480067 FAM196BA6NMK8 535 aa13.28□□□□□ -0.28
CLDN11-205ENST00000480067 SMIM22K7EJ46 135 aa13.28□□□□□ -0.28
CLDN11-205ENST00000480067 CYP21A2P08686 494 aa13.28□□□□□ -0.28
CLDN11-205ENST00000480067 SLURP2P0DP57 97 aa13.28□□□□□ -0.28
CLDN11-205ENST00000480067 ZKSCAN1P17029 563 aaPredicted RBP13.28□□□□□ -0.28
CLDN11-205ENST00000480067 MCCP23508 829 aa13.28□□□□□ -0.28
CLDN11-205ENST00000480067 CDK8P49336 464 aa13.28□□□□□ -0.28
CLDN11-205ENST00000480067 GABPAQ06546 454 aa13.28□□□□□ -0.28
CLDN11-205ENST00000480067 MFSD6Q6ZSS7 791 aa13.28□□□□□ -0.28
CLDN11-205ENST00000480067 C16orf86Q6ZW13 317 aa13.28□□□□□ -0.28
CLDN11-205ENST00000480067 ARMC9Q7Z3E5 817 aa13.28□□□□□ -0.28
CLDN11-205ENST00000480067 C2orf69Q8N8R5 385 aa13.28□□□□□ -0.28
CLDN11-205ENST00000480067 RNF41Q9H4P4 317 aaPredicted RBP13.28□□□□□ -0.28
CLDN11-205ENST00000480067 UPF2Q9HAU5 1272 aaKnown RBP13.28□□□□□ -0.28
CLDN11-205ENST00000480067 SLC27A2O14975 620 aa13.28□□□□□ -0.28
CLDN11-205ENST00000480067 USP2O75604 605 aaPredicted RBP13.28□□□□□ -0.28
CLDN11-205ENST00000480067 IREB2P48200 963 aaKnown RBP13.28□□□□□ -0.28
CLDN11-205ENST00000480067 AKNAD1Q5T1N1 836 aa13.28□□□□□ -0.28
CLDN11-205ENST00000480067 CREB3L3Q68CJ9 461 aa13.28□□□□□ -0.28
CLDN11-205ENST00000480067 SLC44A5Q8NCS7 719 aa13.28□□□□□ -0.28
CLDN11-205ENST00000480067 CNKSR2Q8WXI2 1034 aa13.28□□□□□ -0.28
CLDN11-205ENST00000480067 BACH2Q9BYV9 841 aa13.28□□□□□ -0.28
CLDN11-205ENST00000480067 TOMM22Q9NS69 142 aa13.28□□□□□ -0.28
CLDN11-205ENST00000480067 ANGEL1Q9UNK9 670 aaKnown RBP13.28□□□□□ -0.28
CLDN11-205ENST00000480067 FZD1Q9UP38 647 aa13.28□□□□□ -0.28
CLDN11-205ENST00000480067 PASKQ96RG2 1323 aa13.27□□□□□ -0.28
CLDN11-205ENST00000480067 PCP11498 1178 aaKnown RBP13.27□□□□□ -0.29
CLDN11-205ENST00000480067 HSPA4P34932 840 aa13.27□□□□□ -0.29
CLDN11-205ENST00000480067 FKBP1BP68106 108 aa13.27□□□□□ -0.29
CLDN11-205ENST00000480067 TRDNQ13061 729 aa13.27□□□□□ -0.29
CLDN11-205ENST00000480067 CERKLQ49MI3 558 aaPredicted RBP13.27□□□□□ -0.29
CLDN11-205ENST00000480067 CST9Q5W186 159 aa13.27□□□□□ -0.29
CLDN11-205ENST00000480067 ZNF444Q8N0Y2 327 aaPredicted RBP13.27□□□□□ -0.29
CLDN11-205ENST00000480067 KLRG1Q96E93 195 aa13.27□□□□□ -0.29
CLDN11-205ENST00000480067 WRNIP1Q96S55 665 aa13.27□□□□□ -0.29
CLDN11-205ENST00000480067 DNAJC18Q9H819 358 aa13.27□□□□□ -0.29
CLDN11-205ENST00000480067 GBA2Q9HCG7 927 aaPredicted RBP13.27□□□□□ -0.29
CLDN11-205ENST00000480067 INCENPQ9NQS7 918 aa13.27□□□□□ -0.29
CLDN11-205ENST00000480067 PHF20L1A8MW92 1017 aa13.26□□□□□ -0.29
CLDN11-205ENST00000480067 PRDM1O75626 825 aa13.26□□□□□ -0.29
CLDN11-205ENST00000480067 SHMT1P34896 483 aa13.26□□□□□ -0.29
CLDN11-205ENST00000480067 RRP12Q5JTH9 1297 aaKnown RBP13.26□□□□□ -0.29
CLDN11-205ENST00000480067 TATDN1Q6P1N9 297 aa13.26□□□□□ -0.29
CLDN11-205ENST00000480067 TBC1D10CQ8IV04 446 aa13.26□□□□□ -0.29
CLDN11-205ENST00000480067 STAG1Q8WVM7 1258 aa13.26□□□□□ -0.29
CLDN11-205ENST00000480067 NBPF3Q9H094 633 aa13.26□□□□□ -0.29
CLDN11-205ENST00000480067 FOCADQ5VW36 1801 aa13.26□□□□□ -0.29
CLDN11-205ENST00000480067 ROBO3Q96MS0 1386 aa13.26□□□□□ -0.29
CLDN11-205ENST00000480067 CDK5RAP2Q96SN8 1893 aa13.26□□□□□ -0.29
CLDN11-205ENST00000480067 BAZ2AQ9UIF9 1905 aaKnown RBP13.25□□□□□ -0.29
CLDN11-205ENST00000480067 UBE2Q2LH0YL09 131 aa13.25□□□□□ -0.29
CLDN11-205ENST00000480067 RANBP6O60518 1105 aaKnown RBP13.25□□□□□ -0.29
CLDN11-205ENST00000480067 CTNND1O60716 968 aaKnown RBP13.25□□□□□ -0.29
CLDN11-205ENST00000480067 MAP3K9P80192 1104 aa13.25□□□□□ -0.29
CLDN11-205ENST00000480067 MOB2Q70IA6 237 aa13.25□□□□□ -0.29
CLDN11-205ENST00000480067 CCDC17Q96LX7 622 aa13.25□□□□□ -0.29
CLDN11-205ENST00000480067 KRT23Q9C075 422 aa13.25□□□□□ -0.29
CLDN11-205ENST00000480067 CNNM2Q9H8M5 875 aa13.25□□□□□ -0.29
CLDN11-205ENST00000480067 ZNF112Q9UJU3 913 aa13.25□□□□□ -0.29
CLDN11-205ENST00000480067 SSC5DA1L4H1 1573 aa13.25□□□□□ -0.29
CLDN11-205ENST00000480067 NAV1Q8NEY1 1877 aa13.25□□□□□ -0.29
CLDN11-205ENST00000480067 MYH1P12882 1939 aa13.25□□□□□ -0.29
CLDN11-205ENST00000480067 E7EWF7 191 aa13.24□□□□□ -0.29
CLDN11-205ENST00000480067 MPHOSPH10O00566 681 aaKnown RBP13.24□□□□□ -0.29
CLDN11-205ENST00000480067 ORC4O43929 436 aa13.24□□□□□ -0.29
CLDN11-205ENST00000480067 FGRP09769 529 aa13.24□□□□□ -0.29
CLDN11-205ENST00000480067 INPP5BP32019 993 aa13.24□□□□□ -0.29
CLDN11-205ENST00000480067 CAP2P40123 477 aa13.24□□□□□ -0.29
CLDN11-205ENST00000480067 KRT32Q14532 448 aa13.24□□□□□ -0.29
CLDN11-205ENST00000480067 MAP3K11Q16584 847 aa13.24□□□□□ -0.29
CLDN11-205ENST00000480067 ABCB5Q2M3G0 1257 aa13.24□□□□□ -0.29
CLDN11-205ENST00000480067 ANKRD13AQ8IZ07 590 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms