RNA–Protein interactions for RNA: ENST00000479958.6

COMMD3-212, Transcript of COMM domain containing 3, humanhuman

TSL 2

Gene COMMD3, Length 1,443 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-212ENST00000479958 PRAMEF27A3QJZ7 478 aa9.13□□□□□ -0.95
COMMD3-212ENST00000479958 PTPN11Q06124 597 aaPredicted RBP9.13□□□□□ -0.95
COMMD3-212ENST00000479958 CYFIP1Q7L576 1253 aa9.13□□□□□ -0.95
COMMD3-212ENST00000479958 STK11IPQ8N1F8 1099 aa9.13□□□□□ -0.95
COMMD3-212ENST00000479958 TOP6BLQ8N6T0 577 aa9.13□□□□□ -0.95
COMMD3-212ENST00000479958 PLPPR2Q96GM1 343 aa9.13□□□□□ -0.95
COMMD3-212ENST00000479958 CRELD1Q96HD1 420 aa9.13□□□□□ -0.95
COMMD3-212ENST00000479958 MKNK2Q9HBH9 465 aa9.13□□□□□ -0.95
COMMD3-212ENST00000479958 PRDM10Q9NQV6 1147 aa9.13□□□□□ -0.95
COMMD3-212ENST00000479958 GTF2IRD1Q9UHL9 959 aa9.13□□□□□ -0.95
COMMD3-212ENST00000479958 OAS3Q9Y6K5 1087 aaKnown RBP9.13□□□□□ -0.95
COMMD3-212ENST00000479958 ADAMTS4O75173 837 aa9.12□□□□□ -0.95
COMMD3-212ENST00000479958 ETF1P62495 437 aaKnown RBP9.12□□□□□ -0.95
COMMD3-212ENST00000479958 TP53INP2Q8IXH6 220 aa9.12□□□□□ -0.95
COMMD3-212ENST00000479958 NETO1Q8TDF5 533 aa9.12□□□□□ -0.95
COMMD3-212ENST00000479958 MISP3Q96FF7 219 aa9.12□□□□□ -0.95
COMMD3-212ENST00000479958 BCL2L13Q9BXK5 485 aa9.12□□□□□ -0.95
COMMD3-212ENST00000479958 WNT10AQ9GZT5 417 aa9.12□□□□□ -0.95
COMMD3-212ENST00000479958 PCDHB5Q9Y5E4 795 aa9.12□□□□□ -0.95
COMMD3-212ENST00000479958 LEFTY1O75610 366 aa9.11□□□□□ -0.95
COMMD3-212ENST00000479958 TSNAXIP1Q2TAA8 658 aa9.11□□□□□ -0.95
COMMD3-212ENST00000479958 WIPI1Q5MNZ9 446 aaPredicted RBP9.11□□□□□ -0.95
COMMD3-212ENST00000479958 RELL1Q8IUW5 271 aa9.11□□□□□ -0.95
COMMD3-212ENST00000479958 GAL3ST3Q96A11 431 aa9.11□□□□□ -0.95
COMMD3-212ENST00000479958 SLC5A6Q9Y289 635 aa9.11□□□□□ -0.95
COMMD3-212ENST00000479958 TACC3Q9Y6A5 838 aa9.11□□□□□ -0.95
COMMD3-212ENST00000479958 LRIG2O94898 1065 aa9.1□□□□□ -0.95
COMMD3-212ENST00000479958 CTSHP09668 335 aa9.1□□□□□ -0.95
COMMD3-212ENST00000479958 NTF4P34130 210 aa9.1□□□□□ -0.95
COMMD3-212ENST00000479958 TMCO4Q5TGY1 634 aa9.1□□□□□ -0.95
COMMD3-212ENST00000479958 HOMEZQ8IX15 550 aa9.1□□□□□ -0.95
COMMD3-212ENST00000479958 AGBL5Q8NDL9 886 aa9.1□□□□□ -0.95
COMMD3-212ENST00000479958 FLCNQ8NFG4 579 aa9.1□□□□□ -0.95
COMMD3-212ENST00000479958 TAGLNQ01995 201 aaKnown RBP9.09□□□□□ -0.95
COMMD3-212ENST00000479958 PWP1Q13610 501 aa9.09□□□□□ -0.95
COMMD3-212ENST00000479958 SEPT6Q14141 434 aa9.09□□□□□ -0.95
COMMD3-212ENST00000479958 HID1Q8IV36 788 aa9.09□□□□□ -0.95
COMMD3-212ENST00000479958 FOXQ1Q9C009 403 aa9.09□□□□□ -0.95
COMMD3-212ENST00000479958 TFE3P19532 575 aaPredicted RBP9.08□□□□□ -0.96
COMMD3-212ENST00000479958 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.08□□□□□ -0.96
COMMD3-212ENST00000479958 CCDC84Q86UT8 332 aaPredicted RBP9.08□□□□□ -0.96
COMMD3-212ENST00000479958 FAM181AQ8N9Y4 354 aa9.08□□□□□ -0.96
COMMD3-212ENST00000479958 MFSD2AQ8NA29 543 aa9.08□□□□□ -0.96
COMMD3-212ENST00000479958 JARID2Q92833 1246 aaPredicted RBP9.08□□□□□ -0.96
COMMD3-212ENST00000479958 TMEM265A0A087WTH1 108 aa9.07□□□□□ -0.96
COMMD3-212ENST00000479958 IGF2BP3O00425 579 aaKnown RBP eCLIP9.07□□□□□ -0.96
COMMD3-212ENST00000479958 PDE4BQ07343 736 aa9.07□□□□□ -0.96
COMMD3-212ENST00000479958 IFI16Q16666 785 aaKnown RBP9.07□□□□□ -0.96
COMMD3-212ENST00000479958 ARMCX6Q7L4S7 300 aa9.07□□□□□ -0.96
COMMD3-212ENST00000479958 VAV3Q9UKW4 847 aa9.07□□□□□ -0.96
COMMD3-212ENST00000479958 COL17A1Q9UMD9 1497 aaPredicted RBP9.07□□□□□ -0.96
COMMD3-212ENST00000479958 GFRA2O00451 464 aa9.06□□□□□ -0.96
COMMD3-212ENST00000479958 CAP2P40123 477 aa9.06□□□□□ -0.96
COMMD3-212ENST00000479958 RPL6Q02878 288 aaKnown RBP9.06□□□□□ -0.96
COMMD3-212ENST00000479958 PLD6Q8N2A8 252 aaKnown RBP9.06□□□□□ -0.96
COMMD3-212ENST00000479958 BCL7CQ8WUZ0 217 aaPredicted RBP9.06□□□□□ -0.96
COMMD3-212ENST00000479958 RSRP1Q9BUV0 290 aa9.06□□□□□ -0.96
COMMD3-212ENST00000479958 TLR6Q9Y2C9 796 aa9.06□□□□□ -0.96
COMMD3-212ENST00000479958 MYO15BQ96JP2 1530 aa9.06□□□□□ -0.96
COMMD3-212ENST00000479958 GNAT3A8MTJ3 354 aa9.05□□□□□ -0.96
COMMD3-212ENST00000479958 BPNT1O95861 308 aa9.05□□□□□ -0.96
COMMD3-212ENST00000479958 GRK4P32298 578 aa9.05□□□□□ -0.96
COMMD3-212ENST00000479958 OXCT1P55809 520 aa9.05□□□□□ -0.96
COMMD3-212ENST00000479958 PRKCQQ04759 706 aa9.05□□□□□ -0.96
COMMD3-212ENST00000479958 MCTP1Q6DN14 999 aa9.05□□□□□ -0.96
COMMD3-212ENST00000479958 UBE3DQ7Z6J8 389 aa9.05□□□□□ -0.96
COMMD3-212ENST00000479958 PHC3Q8NDX5 983 aa9.05□□□□□ -0.96
COMMD3-212ENST00000479958 GIPC2Q8TF65 315 aa9.05□□□□□ -0.96
COMMD3-212ENST00000479958 SNX11Q9Y5W9 270 aa9.05□□□□□ -0.96
COMMD3-212ENST00000479958 CEACAM5P06731 702 aa9.05□□□□□ -0.96
COMMD3-212ENST00000479958 GBP2P32456 591 aaPredicted RBP9.05□□□□□ -0.96
COMMD3-212ENST00000479958 CDK8P49336 464 aa9.05□□□□□ -0.96
COMMD3-212ENST00000479958 LMNB2Q03252 620 aa9.05□□□□□ -0.96
COMMD3-212ENST00000479958 HEXIM2Q96MH2 286 aaKnown RBP9.05□□□□□ -0.96
COMMD3-212ENST00000479958 KRTAP9-2Q9BYQ4 174 aa9.05□□□□□ -0.96
COMMD3-212ENST00000479958 PRDM5Q9NQX1 630 aaPredicted RBP9.05□□□□□ -0.96
COMMD3-212ENST00000479958 NACADO15069 1562 aa9.04□□□□□ -0.96
COMMD3-212ENST00000479958 PGRP06401 933 aa9.04□□□□□ -0.96
COMMD3-212ENST00000479958 CAMK2GQ13555 558 aaPredicted RBP9.04□□□□□ -0.96
COMMD3-212ENST00000479958 SLBPQ14493 270 aaKnown RBP eCLIP9.04□□□□□ -0.96
COMMD3-212ENST00000479958 ZNF746Q6NUN9 644 aaPredicted RBP9.04□□□□□ -0.96
COMMD3-212ENST00000479958 FAM214BQ7L5A3 538 aa9.04□□□□□ -0.96
COMMD3-212ENST00000479958 ABI1Q8IZP0 508 aa9.04□□□□□ -0.96
COMMD3-212ENST00000479958 HRASLS5Q96KN8 279 aa9.04□□□□□ -0.96
COMMD3-212ENST00000479958 TMEM74Q96NL1 305 aa9.04□□□□□ -0.96
COMMD3-212ENST00000479958 FBRSQ9HAH7 460 aa9.04□□□□□ -0.96
COMMD3-212ENST00000479958 PAK6Q9NQU5 681 aaPredicted RBP9.04□□□□□ -0.96
COMMD3-212ENST00000479958 TPX2Q9ULW0 747 aaKnown RBP9.04□□□□□ -0.96
COMMD3-212ENST00000479958 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.03□□□□□ -0.96
COMMD3-212ENST00000479958 CST3P01034 146 aaPredicted RBP9.03□□□□□ -0.96
COMMD3-212ENST00000479958 TAL1P17542 331 aaPredicted RBP9.03□□□□□ -0.96
COMMD3-212ENST00000479958 AOC3Q16853 763 aa9.03□□□□□ -0.96
COMMD3-212ENST00000479958 ADGRE2Q9UHX3 823 aa9.03□□□□□ -0.96
COMMD3-212ENST00000479958 SCRIBQ14160 1630 aa9.02□□□□□ -0.97
COMMD3-212ENST00000479958 EOMESO95936 686 aa9.02□□□□□ -0.97
COMMD3-212ENST00000479958 ITIH2P19823 946 aa9.02□□□□□ -0.97
COMMD3-212ENST00000479958 CYP7A1P22680 504 aa9.02□□□□□ -0.97
COMMD3-212ENST00000479958 BNIP3Q12983 259 aa9.02□□□□□ -0.97
COMMD3-212ENST00000479958 SLC6A19Q695T7 634 aa9.02□□□□□ -0.97
COMMD3-212ENST00000479958 MIPEPQ99797 713 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms