RNA–Protein interactions for RNA: ENST00000479544.6

USP42-206, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 1 (best)

Gene USP42, Length 4,286 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-206ENST00000479544 E4F1Q66K89 784 aaPredicted RBP15.27■□□□□ 0.03
USP42-206ENST00000479544 BCAS4Q8TDM0 211 aa15.27■□□□□ 0.03
USP42-206ENST00000479544 SAMM50Q9Y512 469 aa15.27■□□□□ 0.03
USP42-206ENST00000479544 GOLGA6BA6NDN3 693 aa15.26■□□□□ 0.03
USP42-206ENST00000479544 IKQ13123 557 aaPredicted RBP15.26■□□□□ 0.03
USP42-206ENST00000479544 PTPROQ16827 1216 aa15.26■□□□□ 0.03
USP42-206ENST00000479544 LINC00301Q8NCQ3 95 aa15.26■□□□□ 0.03
USP42-206ENST00000479544 SLC4A4Q9Y6R1 1079 aa15.26■□□□□ 0.03
USP42-206ENST00000479544 CDC25BP30305 580 aa15.26■□□□□ 0.03
USP42-206ENST00000479544 ARMCX5Q6P1M9 558 aa15.26■□□□□ 0.03
USP42-206ENST00000479544 IP6K1Q92551 441 aa15.26■□□□□ 0.03
USP42-206ENST00000479544 RABGGTAQ92696 567 aa15.26■□□□□ 0.03
USP42-206ENST00000479544 QTRT2Q9H974 415 aaKnown RBP15.26■□□□□ 0.03
USP42-206ENST00000479544 ATP5JP18859 108 aa15.26■□□□□ 0.03
USP42-206ENST00000479544 KCTD16Q68DU8 428 aa15.26■□□□□ 0.03
USP42-206ENST00000479544 ACRBPQ8NEB7 543 aa15.26■□□□□ 0.03
USP42-206ENST00000479544 CABLES1Q8TDN4 633 aa15.26■□□□□ 0.03
USP42-206ENST00000479544 PRR36Q9H6K5 1346 aa15.26■□□□□ 0.03
USP42-206ENST00000479544 TACC1O75410 805 aa15.26■□□□□ 0.03
USP42-206ENST00000479544 CMA1P23946 247 aa15.26■□□□□ 0.03
USP42-206ENST00000479544 BRD3Q15059 726 aa15.26■□□□□ 0.03
USP42-206ENST00000479544 RNF17Q9BXT8 1623 aaKnown RBP15.26■□□□□ 0.03
USP42-206ENST00000479544 SYNRGQ9UMZ2 1314 aa15.25■□□□□ 0.03
USP42-206ENST00000479544 CFAP58Q5T655 872 aa15.25■□□□□ 0.03
USP42-206ENST00000479544 TCERG1LQ5VWI1 586 aa15.25■□□□□ 0.03
USP42-206ENST00000479544 ANKRD13CQ8N6S4 541 aa15.25■□□□□ 0.03
USP42-206ENST00000479544 MLKLQ8NB16 471 aa15.25■□□□□ 0.03
USP42-206ENST00000479544 CASP14P31944 242 aa15.25■□□□□ 0.03
USP42-206ENST00000479544 ZAP70P43403 619 aa15.25■□□□□ 0.03
USP42-206ENST00000479544 MAP2K1Q02750 393 aaPredicted RBP15.25■□□□□ 0.03
USP42-206ENST00000479544 ABCB6Q9NP58 842 aa15.25■□□□□ 0.03
USP42-206ENST00000479544 FGAP02671 866 aa15.25■□□□□ 0.03
USP42-206ENST00000479544 ZFYP08048 801 aaPredicted RBP15.25■□□□□ 0.03
USP42-206ENST00000479544 NEFHP12036 1026 aa15.25■□□□□ 0.03
USP42-206ENST00000479544 RBM6P78332 1123 aaKnown RBP15.25■□□□□ 0.03
USP42-206ENST00000479544 CTDSPL2Q05D32 466 aa15.25■□□□□ 0.03
USP42-206ENST00000479544 SPAG1Q07617 926 aa15.25■□□□□ 0.03
USP42-206ENST00000479544 TBC1D8BQ0IIM8 1120 aa15.25■□□□□ 0.03
USP42-206ENST00000479544 TRMT1LQ7Z2T5 733 aaKnown RBP15.25■□□□□ 0.03
USP42-206ENST00000479544 WDR24Q96S15 920 aa15.25■□□□□ 0.03
USP42-206ENST00000479544 ANKRD18BA2A2Z9 1011 aa15.24■□□□□ 0.03
USP42-206ENST00000479544 ASIC1P78348 528 aa15.24■□□□□ 0.03
USP42-206ENST00000479544 CCZ1BP86790 482 aa15.24■□□□□ 0.03
USP42-206ENST00000479544 CCZ1P86791 482 aaPredicted RBP15.24■□□□□ 0.03
USP42-206ENST00000479544 IQCB1Q15051 598 aa15.24■□□□□ 0.03
USP42-206ENST00000479544 CCDC40Q4G0X9 1142 aa15.24■□□□□ 0.03
USP42-206ENST00000479544 CC2D1AQ6P1N0 951 aaPredicted RBP15.24■□□□□ 0.03
USP42-206ENST00000479544 DPF2Q92785 391 aa15.24■□□□□ 0.03
USP42-206ENST00000479544 HELLSQ9NRZ9 838 aa15.24■□□□□ 0.03
USP42-206ENST00000479544 JRKLQ9Y4A0 524 aa15.24■□□□□ 0.03
USP42-206ENST00000479544 CAPN7Q9Y6W3 813 aa15.24■□□□□ 0.03
USP42-206ENST00000479544 SLIT1O75093 1534 aa15.24■□□□□ 0.03
USP42-206ENST00000479544 ARHGAP23Q9P227 1491 aa15.24■□□□□ 0.03
USP42-206ENST00000479544 OPA1O60313 960 aa15.24■□□□□ 0.03
USP42-206ENST00000479544 TOGARAM2Q6ZUX3 1019 aa15.24■□□□□ 0.03
USP42-206ENST00000479544 PSMA7O14818 248 aa15.24■□□□□ 0.03
USP42-206ENST00000479544 CUTAO60888 179 aa15.24■□□□□ 0.03
USP42-206ENST00000479544 ZNF496Q96IT1 587 aaPredicted RBP15.24■□□□□ 0.03
USP42-206ENST00000479544 CASP1P29466 404 aa15.23■□□□□ 0.03
USP42-206ENST00000479544 VAV2P52735 878 aa15.23■□□□□ 0.03
USP42-206ENST00000479544 SRGAP1Q7Z6B7 1085 aa15.23■□□□□ 0.03
USP42-206ENST00000479544 ANKRD18AQ8IVF6 992 aa15.23■□□□□ 0.03
USP42-206ENST00000479544 MAGEB6Q8N7X4 407 aa15.23■□□□□ 0.03
USP42-206ENST00000479544 RTEL1Q9NZ71 1219 aa15.23■□□□□ 0.03
USP42-206ENST00000479544 TTF2Q9UNY4 1162 aaKnown RBP15.23■□□□□ 0.03
USP42-206ENST00000479544 V9GY48 417 aaPredicted RBP15.23■□□□□ 0.03
USP42-206ENST00000479544 GNGT1P63211 74 aa15.23■□□□□ 0.03
USP42-206ENST00000479544 KRT83P78385 493 aa15.23■□□□□ 0.03
USP42-206ENST00000479544 NCAPH2Q6IBW4 605 aa15.23■□□□□ 0.03
USP42-206ENST00000479544 POTEAQ6S8J7 498 aa15.23■□□□□ 0.03
USP42-206ENST00000479544 LRRN4CLQ8ND94 238 aa15.23■□□□□ 0.03
USP42-206ENST00000479544 EHBP1Q8NDI1 1231 aa15.23■□□□□ 0.03
USP42-206ENST00000479544 CDC23Q9UJX2 597 aa15.23■□□□□ 0.03
USP42-206ENST00000479544 STX8Q9UNK0 236 aa15.23■□□□□ 0.03
USP42-206ENST00000479544 KIF1BO60333 1816 aa15.23■□□□□ 0.03
USP42-206ENST00000479544 AFF2P51816 1311 aa15.23■□□□□ 0.03
USP42-206ENST00000479544 ADCY9O60503 1353 aa15.23■□□□□ 0.03
USP42-206ENST00000479544 DCAF8L1A6NGE4 600 aa15.23■□□□□ 0.03
USP42-206ENST00000479544 GIGYF1O75420 1035 aaPredicted RBP15.23■□□□□ 0.03
USP42-206ENST00000479544 PI16Q6UXB8 463 aa15.23■□□□□ 0.03
USP42-206ENST00000479544 CCDC91Q7Z6B0 441 aa15.23■□□□□ 0.03
USP42-206ENST00000479544 UIMC1Q96RL1 719 aa15.23■□□□□ 0.03
USP42-206ENST00000479544 MKNK2Q9HBH9 465 aa15.23■□□□□ 0.03
USP42-206ENST00000479544 POLD4Q9HCU8 107 aa15.23■□□□□ 0.03
USP42-206ENST00000479544 TRPC5Q9UL62 973 aaPredicted RBP15.23■□□□□ 0.03
USP42-206ENST00000479544 MYO6Q9UM54 1294 aa15.23■□□□□ 0.03
USP42-206ENST00000479544 GOLGA6L10A0A0M3HER8 536 aa15.23■□□□□ 0.03
USP42-206ENST00000479544 MTF1Q14872 753 aa15.23■□□□□ 0.03
USP42-206ENST00000479544 NAA25Q14CX7 972 aa15.23■□□□□ 0.03
USP42-206ENST00000479544 LRRC24Q50LG9 513 aa15.23■□□□□ 0.03
USP42-206ENST00000479544 ZNF790Q6PG37 636 aa15.23■□□□□ 0.03
USP42-206ENST00000479544 CCDC121Q6ZUS5 278 aa15.23■□□□□ 0.03
USP42-206ENST00000479544 VPS54Q9P1Q0 977 aa15.23■□□□□ 0.03
USP42-206ENST00000479544 TSPY2A6NKD2 308 aa15.22■□□□□ 0.03
USP42-206ENST00000479544 MBD4O95243 580 aa15.22■□□□□ 0.03
USP42-206ENST00000479544 DHX40Q8IX18 779 aaKnown RBP15.22■□□□□ 0.03
USP42-206ENST00000479544 BMP2KQ9NSY1 1161 aaPredicted RBP15.22■□□□□ 0.03
USP42-206ENST00000479544 TCP11L1Q9NUJ3 509 aa15.22■□□□□ 0.03
USP42-206ENST00000479544 FBXO3Q9UK99 471 aa15.22■□□□□ 0.03
USP42-206ENST00000479544 JAG2Q9Y219 1238 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms