RNA–Protein interactions for RNA: ENST00000478743.1

HDAC8-217, Transcript of histone deacetylase 8, humanhuman

TSL 4

Gene HDAC8, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-217ENST00000478743 KHSRPQ92945 711 aaKnown RBP eCLIP15.58■□□□□ 0.08
HDAC8-217ENST00000478743 PRDM12Q9H4Q4 367 aa15.58■□□□□ 0.08
HDAC8-217ENST00000478743 C11orf16Q9NQ32 467 aa15.58■□□□□ 0.08
HDAC8-217ENST00000478743 FLRT1Q9NZU1 646 aa15.58■□□□□ 0.08
HDAC8-217ENST00000478743 MORF4L1Q9UBU8 362 aa15.58■□□□□ 0.08
HDAC8-217ENST00000478743 PNMA3Q9UL41 463 aa15.58■□□□□ 0.08
HDAC8-217ENST00000478743 GBF1Q92538 1859 aa15.57■□□□□ 0.08
HDAC8-217ENST00000478743 FAM86C2PA6NEL3 165 aa15.57■□□□□ 0.08
HDAC8-217ENST00000478743 FAM196BA6NMK8 535 aa15.57■□□□□ 0.08
HDAC8-217ENST00000478743 XRCC5P13010 732 aaKnown RBP15.57■□□□□ 0.08
HDAC8-217ENST00000478743 GCLCP48506 637 aaPredicted RBP15.57■□□□□ 0.08
HDAC8-217ENST00000478743 HMGCS2P54868 508 aa15.57■□□□□ 0.08
HDAC8-217ENST00000478743 TAF7LQ5H9L4 462 aa15.57■□□□□ 0.08
HDAC8-217ENST00000478743 NUDT12Q9BQG2 462 aa15.57■□□□□ 0.08
HDAC8-217ENST00000478743 MAST3O60307 1309 aa15.57■□□□□ 0.08
HDAC8-217ENST00000478743 CHD7Q9P2D1 2997 aa15.56■□□□□ 0.08
HDAC8-217ENST00000478743 DDTLA6NHG4 134 aaPredicted RBP15.56■□□□□ 0.08
HDAC8-217ENST00000478743 FRAT2O75474 233 aaPredicted RBP15.56■□□□□ 0.08
HDAC8-217ENST00000478743 PBX2P40425 430 aa15.56■□□□□ 0.08
HDAC8-217ENST00000478743 RGS3P49796 1198 aa15.56■□□□□ 0.08
HDAC8-217ENST00000478743 TFF2Q03403 129 aa15.56■□□□□ 0.08
HDAC8-217ENST00000478743 GJC2Q5T442 439 aaPredicted RBP15.56■□□□□ 0.08
HDAC8-217ENST00000478743 PROCA1Q8NCQ7 364 aaPredicted RBP15.56■□□□□ 0.08
HDAC8-217ENST00000478743 RUNDC1Q96C34 613 aa15.56■□□□□ 0.08
HDAC8-217ENST00000478743 PORCNQ9H237 461 aa15.56■□□□□ 0.08
HDAC8-217ENST00000478743 IFT57Q9NWB7 429 aa15.56■□□□□ 0.08
HDAC8-217ENST00000478743 MYH2Q9UKX2 1941 aa15.55■□□□□ 0.08
HDAC8-217ENST00000478743 LRRC37A2A6NM11 1700 aa15.55■□□□□ 0.08
HDAC8-217ENST00000478743 BMP1P13497 986 aa15.55■□□□□ 0.08
HDAC8-217ENST00000478743 KCNQ1P51787 676 aa15.55■□□□□ 0.08
HDAC8-217ENST00000478743 CCDC57Q2TAC2 916 aa15.55■□□□□ 0.08
HDAC8-217ENST00000478743 SLC39A5Q6ZMH5 540 aa15.55■□□□□ 0.08
HDAC8-217ENST00000478743 VPS37DQ86XT2 251 aa15.55■□□□□ 0.08
HDAC8-217ENST00000478743 TRPV1Q8NER1 839 aa15.55■□□□□ 0.08
HDAC8-217ENST00000478743 SOCS4Q8WXH5 440 aa15.55■□□□□ 0.08
HDAC8-217ENST00000478743 TIFAQ96CG3 184 aa15.55■□□□□ 0.08
HDAC8-217ENST00000478743 MYH16Q9H6N6 1097 aa15.55■□□□□ 0.08
HDAC8-217ENST00000478743 SPINK5Q9NQ38 1064 aaPredicted RBP15.55■□□□□ 0.08
HDAC8-217ENST00000478743 GRXCR1A8MXD5 290 aa15.54■□□□□ 0.08
HDAC8-217ENST00000478743 DNM1LO00429 736 aa15.54■□□□□ 0.08
HDAC8-217ENST00000478743 PRDX5P30044 214 aa15.54■□□□□ 0.08
HDAC8-217ENST00000478743 MAP3K10Q02779 954 aa15.54■□□□□ 0.08
HDAC8-217ENST00000478743 SPP2Q13103 211 aa15.54■□□□□ 0.08
HDAC8-217ENST00000478743 RRP1BQ14684 758 aaKnown RBP15.54■□□□□ 0.08
HDAC8-217ENST00000478743 Q3C1V9 767 aa15.54■□□□□ 0.08
HDAC8-217ENST00000478743 MORN1Q5T089 497 aa15.54■□□□□ 0.08
HDAC8-217ENST00000478743 AKNAD1Q5T1N1 836 aa15.54■□□□□ 0.08
HDAC8-217ENST00000478743 LINS1Q8NG48 757 aa15.54■□□□□ 0.08
HDAC8-217ENST00000478743 APBA2Q99767 749 aa15.54■□□□□ 0.08
HDAC8-217ENST00000478743 DDX4Q9NQI0 724 aaKnown RBP15.54■□□□□ 0.08
HDAC8-217ENST00000478743 USP40Q9NVE5 1235 aa15.54■□□□□ 0.08
HDAC8-217ENST00000478743 DDX20Q9UHI6 824 aaKnown RBP15.54■□□□□ 0.08
HDAC8-217ENST00000478743 LRRFIP2Q9Y608 721 aaKnown RBP15.54■□□□□ 0.08
HDAC8-217ENST00000478743 SNX17Q15036 470 aa15.53■□□□□ 0.08
HDAC8-217ENST00000478743 ANO1Q5XXA6 986 aa15.53■□□□□ 0.08
HDAC8-217ENST00000478743 DNAAF4Q8WXU2 420 aa15.53■□□□□ 0.08
HDAC8-217ENST00000478743 GAS2L1Q99501 681 aaPredicted RBP15.53■□□□□ 0.08
HDAC8-217ENST00000478743 MYO9BQ13459 2157 aa15.53■□□□□ 0.08
HDAC8-217ENST00000478743 SIPA1L1O43166 1804 aa15.52■□□□□ 0.08
HDAC8-217ENST00000478743 CTNND1O60716 968 aaKnown RBP15.52■□□□□ 0.08
HDAC8-217ENST00000478743 RGS2P41220 211 aa15.52■□□□□ 0.08
HDAC8-217ENST00000478743 FLIIQ13045 1269 aa15.52■□□□□ 0.08
HDAC8-217ENST00000478743 LRRC24Q50LG9 513 aa15.52■□□□□ 0.08
HDAC8-217ENST00000478743 TMEM31Q5JXX7 168 aa15.52■□□□□ 0.08
HDAC8-217ENST00000478743 GPR142Q7Z601 462 aa15.52■□□□□ 0.08
HDAC8-217ENST00000478743 VGLL2Q8N8G2 317 aa15.52■□□□□ 0.08
HDAC8-217ENST00000478743 IL27Q8NEV9 243 aa15.52■□□□□ 0.08
HDAC8-217ENST00000478743 LPAR1Q92633 364 aa15.52■□□□□ 0.08
HDAC8-217ENST00000478743 P2RX7Q99572 595 aaKnown RBP15.52■□□□□ 0.08
HDAC8-217ENST00000478743 SUGT1Q9Y2Z0 365 aa15.52■□□□□ 0.08
HDAC8-217ENST00000478743 NDUFB9Q9Y6M9 179 aa15.52■□□□□ 0.08
HDAC8-217ENST00000478743 MRE11P49959 708 aa15.51■□□□□ 0.07
HDAC8-217ENST00000478743 GNAI1P63096 354 aa15.51■□□□□ 0.07
HDAC8-217ENST00000478743 TRMT44Q8IYL2 757 aaKnown RBP15.51■□□□□ 0.07
HDAC8-217ENST00000478743 TSR2Q969E8 191 aaKnown RBP15.51■□□□□ 0.07
HDAC8-217ENST00000478743 RBPJLQ9UBG7 517 aa15.51■□□□□ 0.07
HDAC8-217ENST00000478743 F6X3S4 739 aa15.5■□□□□ 0.07
HDAC8-217ENST00000478743 SLC4A2P04920 1241 aa15.5■□□□□ 0.07
HDAC8-217ENST00000478743 CNGA1P29973 690 aa15.5■□□□□ 0.07
HDAC8-217ENST00000478743 ZSCAN29Q8IWY8 852 aaPredicted RBP15.5■□□□□ 0.07
HDAC8-217ENST00000478743 PBX4Q9BYU1 374 aa15.5■□□□□ 0.07
HDAC8-217ENST00000478743 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.49■□□□□ 0.07
HDAC8-217ENST00000478743 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.49■□□□□ 0.07
HDAC8-217ENST00000478743 IGFBP4P22692 258 aa15.49■□□□□ 0.07
HDAC8-217ENST00000478743 CYP2C19P33261 490 aa15.49■□□□□ 0.07
HDAC8-217ENST00000478743 HERVK_113P62684 666 aa15.49■□□□□ 0.07
HDAC8-217ENST00000478743 FKBP5Q13451 457 aaPredicted RBP15.49■□□□□ 0.07
HDAC8-217ENST00000478743 CAVIN4Q5BKX8 364 aa15.49■□□□□ 0.07
HDAC8-217ENST00000478743 ZNF280CQ8ND82 737 aa15.49■□□□□ 0.07
HDAC8-217ENST00000478743 FERMT2Q96AC1 680 aa15.49■□□□□ 0.07
HDAC8-217ENST00000478743 KAZALD1Q96I82 304 aa15.49■□□□□ 0.07
HDAC8-217ENST00000478743 IDI2Q9BXS1 227 aa15.49■□□□□ 0.07
HDAC8-217ENST00000478743 STK31Q9BXU1 1019 aa15.49■□□□□ 0.07
HDAC8-217ENST00000478743 CXXC1Q9P0U4 656 aaPredicted RBP15.49■□□□□ 0.07
HDAC8-217ENST00000478743 ERVK-9P63128 1117 aa15.48■□□□□ 0.07
HDAC8-217ENST00000478743 ERVK-24P63145 666 aa15.48■□□□□ 0.07
HDAC8-217ENST00000478743 TLE2Q04725 743 aa15.48■□□□□ 0.07
HDAC8-217ENST00000478743 MAP2K5Q13163 448 aa15.48■□□□□ 0.07
HDAC8-217ENST00000478743 PICALMQ13492 652 aa15.48■□□□□ 0.07
HDAC8-217ENST00000478743 SHROOM1Q2M3G4 852 aaPredicted RBP15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms