RNA–Protein interactions for RNA: ENST00000478245.1

TCTN3-205, Transcript of tectonic family member 3, humanhuman

TSL 2

Gene TCTN3, Length 557 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCTN3-205ENST00000478245 ATN1P54259 1190 aaPredicted RBP11.8□□□□□ -0.52
TCTN3-205ENST00000478245 HMGCS2P54868 508 aa11.8□□□□□ -0.52
TCTN3-205ENST00000478245 SPP2Q13103 211 aa11.8□□□□□ -0.52
TCTN3-205ENST00000478245 PUM3Q15397 648 aaKnown RBP11.8□□□□□ -0.52
TCTN3-205ENST00000478245 SHHQ15465 462 aa11.8□□□□□ -0.52
TCTN3-205ENST00000478245 LHX8Q68G74 356 aa11.8□□□□□ -0.52
TCTN3-205ENST00000478245 SLC4A10Q6U841 1118 aa11.8□□□□□ -0.52
TCTN3-205ENST00000478245 SUCLG2Q96I99 432 aa11.8□□□□□ -0.52
TCTN3-205ENST00000478245 TTYH1Q9H313 450 aaPredicted RBP11.8□□□□□ -0.52
TCTN3-205ENST00000478245 KIF16BQ96L93 1317 aa11.8□□□□□ -0.52
TCTN3-205ENST00000478245 CDH23Q9H251 3354 aa11.79□□□□□ -0.52
TCTN3-205ENST00000478245 ALDH1L1O75891 902 aa11.79□□□□□ -0.52
TCTN3-205ENST00000478245 SLURP2P0DP57 97 aa11.79□□□□□ -0.52
TCTN3-205ENST00000478245 SLC5A1P13866 664 aa11.79□□□□□ -0.52
TCTN3-205ENST00000478245 IRX3P78415 501 aaPredicted RBP11.79□□□□□ -0.52
TCTN3-205ENST00000478245 SMAD3P84022 425 aaKnown RBP11.79□□□□□ -0.52
TCTN3-205ENST00000478245 MAP3K10Q02779 954 aa11.79□□□□□ -0.52
TCTN3-205ENST00000478245 DDX10Q13206 875 aaKnown RBP11.79□□□□□ -0.52
TCTN3-205ENST00000478245 SH3BP5LQ7L8J4 393 aa11.79□□□□□ -0.52
TCTN3-205ENST00000478245 VGLL2Q8N8G2 317 aa11.79□□□□□ -0.52
TCTN3-205ENST00000478245 ZNF280CQ8ND82 737 aa11.79□□□□□ -0.52
TCTN3-205ENST00000478245 IDI2Q9BXS1 227 aa11.79□□□□□ -0.52
TCTN3-205ENST00000478245 MORF4L1Q9UBU8 362 aa11.79□□□□□ -0.52
TCTN3-205ENST00000478245 DDTLA6NHG4 134 aaPredicted RBP11.78□□□□□ -0.52
TCTN3-205ENST00000478245 RGS2P41220 211 aa11.78□□□□□ -0.52
TCTN3-205ENST00000478245 PICALMQ13492 652 aa11.78□□□□□ -0.52
TCTN3-205ENST00000478245 C9orf50Q5SZB4 431 aa11.78□□□□□ -0.52
TCTN3-205ENST00000478245 GPRC5AQ8NFJ5 357 aa11.78□□□□□ -0.52
TCTN3-205ENST00000478245 SRCIN1Q9C0H9 1055 aa11.78□□□□□ -0.52
TCTN3-205ENST00000478245 BICC1Q9H694 974 aaKnown RBP11.78□□□□□ -0.52
TCTN3-205ENST00000478245 CWC22Q9HCG8 908 aaKnown RBP11.78□□□□□ -0.52
TCTN3-205ENST00000478245 MAPK4P31152 587 aa11.77□□□□□ -0.53
TCTN3-205ENST00000478245 RTP1P59025 263 aa11.77□□□□□ -0.53
TCTN3-205ENST00000478245 CCL14Q16627 93 aa11.77□□□□□ -0.53
TCTN3-205ENST00000478245 KLHDC4Q8TBB5 520 aa11.77□□□□□ -0.53
TCTN3-205ENST00000478245 KAZALD1Q96I82 304 aa11.77□□□□□ -0.53
TCTN3-205ENST00000478245 TBC1D2Q9BYX2 928 aa11.77□□□□□ -0.53
TCTN3-205ENST00000478245 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.77□□□□□ -0.53
TCTN3-205ENST00000478245 PRDM5Q9NQX1 630 aaPredicted RBP11.77□□□□□ -0.53
TCTN3-205ENST00000478245 GNL3LQ9NVN8 582 aaKnown RBP11.77□□□□□ -0.53
TCTN3-205ENST00000478245 ATP11BQ9Y2G3 1177 aa11.77□□□□□ -0.53
TCTN3-205ENST00000478245 RLFQ13129 1914 aa11.77□□□□□ -0.53
TCTN3-205ENST00000478245 FAM196BA6NMK8 535 aa11.76□□□□□ -0.53
TCTN3-205ENST00000478245 NBPF7P0C2Y1 421 aaPredicted RBP11.76□□□□□ -0.53
TCTN3-205ENST00000478245 FGFR2P21802 821 aa11.76□□□□□ -0.53
TCTN3-205ENST00000478245 CNGA1P29973 690 aa11.76□□□□□ -0.53
TCTN3-205ENST00000478245 LPIN2Q92539 896 aa11.76□□□□□ -0.53
TCTN3-205ENST00000478245 OSBPL5Q9H0X9 879 aaPredicted RBP11.76□□□□□ -0.53
TCTN3-205ENST00000478245 USP17L5A8MUK1 530 aa11.75□□□□□ -0.53
TCTN3-205ENST00000478245 PEX10O60683 326 aa11.75□□□□□ -0.53
TCTN3-205ENST00000478245 VAMP4O75379 141 aa11.75□□□□□ -0.53
TCTN3-205ENST00000478245 MFSD14CQ5VZR4 134 aa11.75□□□□□ -0.53
TCTN3-205ENST00000478245 DZIP1Q86YF9 867 aaKnown RBP11.75□□□□□ -0.53
TCTN3-205ENST00000478245 WWC1Q8IX03 1113 aa11.75□□□□□ -0.53
TCTN3-205ENST00000478245 SLF2Q8IX21 1173 aa11.75□□□□□ -0.53
TCTN3-205ENST00000478245 USP38Q8NB14 1042 aa11.75□□□□□ -0.53
TCTN3-205ENST00000478245 BADQ92934 168 aa11.75□□□□□ -0.53
TCTN3-205ENST00000478245 P2RX7Q99572 595 aaKnown RBP11.75□□□□□ -0.53
TCTN3-205ENST00000478245 APBA2Q99767 749 aa11.75□□□□□ -0.53
TCTN3-205ENST00000478245 AS3MTQ9HBK9 375 aa11.75□□□□□ -0.53
TCTN3-205ENST00000478245 DDX4Q9NQI0 724 aaKnown RBP11.75□□□□□ -0.53
TCTN3-205ENST00000478245 TMOD4Q9NZQ9 345 aa11.75□□□□□ -0.53
TCTN3-205ENST00000478245 PIEZO1Q92508 2521 aa11.74□□□□□ -0.53
TCTN3-205ENST00000478245 DNM1LO00429 736 aa11.74□□□□□ -0.53
TCTN3-205ENST00000478245 TBC1D12O60347 775 aa11.74□□□□□ -0.53
TCTN3-205ENST00000478245 MSCO60682 206 aa11.74□□□□□ -0.53
TCTN3-205ENST00000478245 HERVK_113P62684 666 aa11.74□□□□□ -0.53
TCTN3-205ENST00000478245 MAP3K12Q12852 859 aa11.74□□□□□ -0.53
TCTN3-205ENST00000478245 RABL6Q3YEC7 729 aaPredicted RBP11.74□□□□□ -0.53
TCTN3-205ENST00000478245 SH3D19Q5HYK7 790 aa11.74□□□□□ -0.53
TCTN3-205ENST00000478245 GPR142Q7Z601 462 aa11.74□□□□□ -0.53
TCTN3-205ENST00000478245 PLEKHH3Q7Z736 793 aa11.74□□□□□ -0.53
TCTN3-205ENST00000478245 ZGPATQ8N5A5 531 aaKnown RBP11.74□□□□□ -0.53
TCTN3-205ENST00000478245 ANKRD44Q8N8A2 993 aa11.74□□□□□ -0.53
TCTN3-205ENST00000478245 LPAR1Q92633 364 aa11.74□□□□□ -0.53
TCTN3-205ENST00000478245 USP6NLQ92738 828 aa11.74□□□□□ -0.53
TCTN3-205ENST00000478245 PAGR1Q9BTK6 254 aa11.74□□□□□ -0.53
TCTN3-205ENST00000478245 TXNRD2Q9NNW7 524 aa11.74□□□□□ -0.53
TCTN3-205ENST00000478245 DDX20Q9UHI6 824 aaKnown RBP11.74□□□□□ -0.53
TCTN3-205ENST00000478245 DENND2AQ9ULE3 1009 aa11.74□□□□□ -0.53
TCTN3-205ENST00000478245 IL16Q14005 1332 aa11.74□□□□□ -0.53
TCTN3-205ENST00000478245 FANCIQ9NVI1 1328 aa11.74□□□□□ -0.53
TCTN3-205ENST00000478245 RFX7Q2KHR2 1363 aa11.74□□□□□ -0.53
TCTN3-205ENST00000478245 TCF20Q9UGU0 1960 aaKnown RBP11.74□□□□□ -0.53
TCTN3-205ENST00000478245 GAKO14976 1311 aa11.73□□□□□ -0.53
TCTN3-205ENST00000478245 GLRX3O76003 335 aaKnown RBP11.73□□□□□ -0.53
TCTN3-205ENST00000478245 CAP2P40123 477 aa11.73□□□□□ -0.53
TCTN3-205ENST00000478245 BTDP43251 543 aa11.73□□□□□ -0.53
TCTN3-205ENST00000478245 ERVK-9P63128 1117 aa11.73□□□□□ -0.53
TCTN3-205ENST00000478245 ERVK-24P63145 666 aa11.73□□□□□ -0.53
TCTN3-205ENST00000478245 EXOSC9Q06265 439 aaKnown RBP11.73□□□□□ -0.53
TCTN3-205ENST00000478245 MTMR2Q13614 643 aa11.73□□□□□ -0.53
TCTN3-205ENST00000478245 CCDC27Q2M243 656 aa11.73□□□□□ -0.53
TCTN3-205ENST00000478245 MORN1Q5T089 497 aa11.73□□□□□ -0.53
TCTN3-205ENST00000478245 IL27Q8NEV9 243 aa11.73□□□□□ -0.53
TCTN3-205ENST00000478245 PPM1EQ8WY54 764 aa11.73□□□□□ -0.53
TCTN3-205ENST00000478245 EDC3Q96F86 508 aaKnown RBP11.73□□□□□ -0.53
TCTN3-205ENST00000478245 RNPC3Q96LT9 517 aaKnown RBP11.73□□□□□ -0.53
TCTN3-205ENST00000478245 PORCNQ9H237 461 aa11.73□□□□□ -0.53
TCTN3-205ENST00000478245 SALL1Q9NSC2 1324 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms