RNA–Protein interactions for RNA: ENST00000477893.1

ERCC8-205, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 2

Gene ERCC8, Length 752 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-205ENST00000477893 SLF2Q8IX21 1173 aa10.15□□□□□ -0.78
ERCC8-205ENST00000477893 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.15□□□□□ -0.78
ERCC8-205ENST00000477893 ZNF384Q8TF68 577 aa10.15□□□□□ -0.78
ERCC8-205ENST00000477893 FAM151AQ8WW52 585 aa10.15□□□□□ -0.78
ERCC8-205ENST00000477893 EAF2Q96CJ1 260 aaPredicted RBP10.15□□□□□ -0.78
ERCC8-205ENST00000477893 KCTD12Q96CX2 325 aaKnown RBP10.15□□□□□ -0.78
ERCC8-205ENST00000477893 ZNF341Q9BYN7 854 aa10.15□□□□□ -0.78
ERCC8-205ENST00000477893 R3HDMLQ9H3Y0 253 aa10.15□□□□□ -0.78
ERCC8-205ENST00000477893 GPR108Q9NPR9 543 aa10.15□□□□□ -0.78
ERCC8-205ENST00000477893 NOP58Q9Y2X3 529 aaKnown RBP10.15□□□□□ -0.78
ERCC8-205ENST00000477893 SNCAIPQ9Y6H5 919 aa10.15□□□□□ -0.78
ERCC8-205ENST00000477893 MYH2Q9UKX2 1941 aa10.15□□□□□ -0.79
ERCC8-205ENST00000477893 RPAP1Q9BWH6 1393 aaPredicted RBP10.14□□□□□ -0.79
ERCC8-205ENST00000477893 TM4SF4P48230 202 aa10.14□□□□□ -0.79
ERCC8-205ENST00000477893 GSTO1P78417 241 aa10.14□□□□□ -0.79
ERCC8-205ENST00000477893 ERC1Q8IUD2 1116 aa10.14□□□□□ -0.79
ERCC8-205ENST00000477893 ZNF296Q8WUU4 475 aaPredicted RBP10.14□□□□□ -0.79
ERCC8-205ENST00000477893 NSUN4Q96CB9 384 aaKnown RBP10.14□□□□□ -0.79
ERCC8-205ENST00000477893 HOOK2Q96ED9 719 aa10.14□□□□□ -0.79
ERCC8-205ENST00000477893 NOL10Q9BSC4 688 aaKnown RBP10.14□□□□□ -0.79
ERCC8-205ENST00000477893 DDX4Q9NQI0 724 aaKnown RBP10.14□□□□□ -0.79
ERCC8-205ENST00000477893 PIH1D3Q9NQM4 214 aaKnown RBP10.14□□□□□ -0.79
ERCC8-205ENST00000477893 ZBTB40Q9NUA8 1239 aa10.14□□□□□ -0.79
ERCC8-205ENST00000477893 CCL15-CCL14A0A0B4J2E2 113 aa10.13□□□□□ -0.79
ERCC8-205ENST00000477893 FAM196BA6NMK8 535 aa10.13□□□□□ -0.79
ERCC8-205ENST00000477893 HMMRO75330 724 aa10.13□□□□□ -0.79
ERCC8-205ENST00000477893 WDHD1O75717 1129 aaPredicted RBP10.13□□□□□ -0.79
ERCC8-205ENST00000477893 IDH1O75874 414 aaKnown RBP10.13□□□□□ -0.79
ERCC8-205ENST00000477893 CYP2E1P05181 493 aaPredicted RBP10.13□□□□□ -0.79
ERCC8-205ENST00000477893 CCL15Q16663 113 aa10.13□□□□□ -0.79
ERCC8-205ENST00000477893 SLC4A8Q2Y0W8 1093 aa10.13□□□□□ -0.79
ERCC8-205ENST00000477893 DMRTA1Q5VZB9 504 aa10.13□□□□□ -0.79
ERCC8-205ENST00000477893 NAA16Q6N069 864 aaPredicted RBP10.13□□□□□ -0.79
ERCC8-205ENST00000477893 SIRT2Q8IXJ6 389 aa10.13□□□□□ -0.79
ERCC8-205ENST00000477893 TEX11Q8IYF3 940 aa10.13□□□□□ -0.79
ERCC8-205ENST00000477893 RHPN1Q8TCX5 695 aa10.13□□□□□ -0.79
ERCC8-205ENST00000477893 SH3RF3Q8TEJ3 882 aaPredicted RBP10.13□□□□□ -0.79
ERCC8-205ENST00000477893 AATFQ9NY61 560 aaKnown RBP eCLIP10.13□□□□□ -0.79
ERCC8-205ENST00000477893 RFX7Q2KHR2 1363 aa10.13□□□□□ -0.79
ERCC8-205ENST00000477893 MAST2Q6P0Q8 1798 aa10.12□□□□□ -0.79
ERCC8-205ENST00000477893 AK9Q5TCS8 1911 aa10.12□□□□□ -0.79
ERCC8-205ENST00000477893 GPR75-ASB3A0A0A6YYF3 556 aa10.12□□□□□ -0.79
ERCC8-205ENST00000477893 DDTLA6NHG4 134 aaPredicted RBP10.12□□□□□ -0.79
ERCC8-205ENST00000477893 SPDYE5A6NIY4 337 aa10.12□□□□□ -0.79
ERCC8-205ENST00000477893 GPR25O00155 361 aa10.12□□□□□ -0.79
ERCC8-205ENST00000477893 ECM2O94769 699 aaPredicted RBP10.12□□□□□ -0.79
ERCC8-205ENST00000477893 LDHCP07864 332 aa10.12□□□□□ -0.79
ERCC8-205ENST00000477893 RHBDL3P58872 404 aa10.12□□□□□ -0.79
ERCC8-205ENST00000477893 CRHR2Q13324 411 aa10.12□□□□□ -0.79
ERCC8-205ENST00000477893 HSP90AB4PQ58FF6 505 aa10.12□□□□□ -0.79
ERCC8-205ENST00000477893 SH3BP5LQ7L8J4 393 aa10.12□□□□□ -0.79
ERCC8-205ENST00000477893 ADGRA1Q86SQ6 560 aa10.12□□□□□ -0.79
ERCC8-205ENST00000477893 RPAP2Q8IXW5 612 aaPredicted RBP10.12□□□□□ -0.79
ERCC8-205ENST00000477893 BRI3BPQ8WY22 251 aa10.12□□□□□ -0.79
ERCC8-205ENST00000477893 DNAJC2Q99543 621 aaKnown RBP10.12□□□□□ -0.79
ERCC8-205ENST00000477893 PTPN18Q99952 460 aa10.12□□□□□ -0.79
ERCC8-205ENST00000477893 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.12□□□□□ -0.79
ERCC8-205ENST00000477893 DOCK2Q92608 1830 aa10.12□□□□□ -0.79
ERCC8-205ENST00000477893 UNCXA6NJT0 531 aa10.11□□□□□ -0.79
ERCC8-205ENST00000477893 HRO43593 1189 aa10.11□□□□□ -0.79
ERCC8-205ENST00000477893 SMARCA5O60264 1052 aaPredicted RBP10.11□□□□□ -0.79
ERCC8-205ENST00000477893 ENTPD3O75355 529 aa10.11□□□□□ -0.79
ERCC8-205ENST00000477893 SLC34A2O95436 690 aa10.11□□□□□ -0.79
ERCC8-205ENST00000477893 ALDH1A1P00352 501 aa10.11□□□□□ -0.79
ERCC8-205ENST00000477893 IFIT2P09913 472 aaKnown RBP10.11□□□□□ -0.79
ERCC8-205ENST00000477893 PSEN2P49810 448 aa10.11□□□□□ -0.79
ERCC8-205ENST00000477893 GTF2A2P52657 109 aa10.11□□□□□ -0.79
ERCC8-205ENST00000477893 DYNLL1P63167 89 aaKnown RBP10.11□□□□□ -0.79
ERCC8-205ENST00000477893 PDE3AQ14432 1141 aa10.11□□□□□ -0.79
ERCC8-205ENST00000477893 OTUD7BQ6GQQ9 843 aa10.11□□□□□ -0.79
ERCC8-205ENST00000477893 CTU1Q7Z7A3 348 aaKnown RBP10.11□□□□□ -0.79
ERCC8-205ENST00000477893 CCDC84Q86UT8 332 aaPredicted RBP10.11□□□□□ -0.79
ERCC8-205ENST00000477893 ERO1BQ86YB8 467 aa10.11□□□□□ -0.79
ERCC8-205ENST00000477893 MAPKAPK5Q8IW41 473 aa10.11□□□□□ -0.79
ERCC8-205ENST00000477893 CLASRPQ8N2M8 674 aaKnown RBP10.11□□□□□ -0.79
ERCC8-205ENST00000477893 MIGA1Q8NAN2 632 aa10.11□□□□□ -0.79
ERCC8-205ENST00000477893 KIF1BPQ96EK5 621 aa10.11□□□□□ -0.79
ERCC8-205ENST00000477893 IDI2Q9BXS1 227 aa10.11□□□□□ -0.79
ERCC8-205ENST00000477893 CHMP4BQ9H444 224 aaKnown RBP10.11□□□□□ -0.79
ERCC8-205ENST00000477893 ANTXR1Q9H6X2 564 aa10.11□□□□□ -0.79
ERCC8-205ENST00000477893 IRF6O14896 467 aa10.1□□□□□ -0.79
ERCC8-205ENST00000477893 FKTNO75072 461 aa10.1□□□□□ -0.79
ERCC8-205ENST00000477893 CYP7A1P22680 504 aa10.1□□□□□ -0.79
ERCC8-205ENST00000477893 INHBEP58166 350 aa10.1□□□□□ -0.79
ERCC8-205ENST00000477893 PPIL2Q13356 520 aa10.1□□□□□ -0.79
ERCC8-205ENST00000477893 TAF1CQ15572 869 aaPredicted RBP10.1□□□□□ -0.79
ERCC8-205ENST00000477893 FAM43AQ8N2R8 423 aa10.1□□□□□ -0.79
ERCC8-205ENST00000477893 MAGEB6Q8N7X4 407 aa10.1□□□□□ -0.79
ERCC8-205ENST00000477893 PICK1Q9NRD5 415 aa10.1□□□□□ -0.79
ERCC8-205ENST00000477893 SAP30BPQ9UHR5 308 aaKnown RBP10.1□□□□□ -0.79
ERCC8-205ENST00000477893 ATRNL1Q5VV63 1379 aa10.1□□□□□ -0.79
ERCC8-205ENST00000477893 TK2O00142 265 aa10.09□□□□□ -0.79
ERCC8-205ENST00000477893 GOLIM4O00461 696 aa10.09□□□□□ -0.79
ERCC8-205ENST00000477893 BAG3O95817 575 aa10.09□□□□□ -0.79
ERCC8-205ENST00000477893 CETPP11597 493 aa10.09□□□□□ -0.79
ERCC8-205ENST00000477893 RRP1P56182 461 aaKnown RBP10.09□□□□□ -0.79
ERCC8-205ENST00000477893 SNAPC2Q13487 334 aa10.09□□□□□ -0.79
ERCC8-205ENST00000477893 CD99L2Q8TCZ2 262 aa10.09□□□□□ -0.79
ERCC8-205ENST00000477893 TGFBRAP1Q8WUH2 860 aa10.09□□□□□ -0.79
ERCC8-205ENST00000477893 EDC3Q96F86 508 aaKnown RBP10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms