RNA–Protein interactions for RNA: ENST00000477748.1

PDE6D-204, Transcript of phosphodiesterase 6D, humanhuman

TSL 1 (best)

Gene PDE6D, Length 996 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6D-204ENST00000477748 ANKRD23Q86SG2 305 aa17.16■□□□□ 0.34
PDE6D-204ENST00000477748 OSBPL5Q9H0X9 879 aaPredicted RBP17.16■□□□□ 0.34
PDE6D-204ENST00000477748 DYNLL1P63167 89 aaKnown RBP17.15■□□□□ 0.34
PDE6D-204ENST00000477748 MAP3K10Q02779 954 aa17.15■□□□□ 0.34
PDE6D-204ENST00000477748 TMED8Q6PL24 325 aaPredicted RBP17.15■□□□□ 0.34
PDE6D-204ENST00000477748 TGFBRAP1Q8WUH2 860 aa17.15■□□□□ 0.34
PDE6D-204ENST00000477748 PICK1Q9NRD5 415 aa17.15■□□□□ 0.34
PDE6D-204ENST00000477748 MKI67P46013 3256 aaKnown RBP17.15■□□□□ 0.34
PDE6D-204ENST00000477748 FOCADQ5VW36 1801 aa17.14■□□□□ 0.34
PDE6D-204ENST00000477748 COL2A1P02458 1487 aaPredicted RBP17.14■□□□□ 0.33
PDE6D-204ENST00000477748 PHF20L1A8MW92 1017 aa17.14■□□□□ 0.33
PDE6D-204ENST00000477748 CXCL11O14625 94 aa17.14■□□□□ 0.33
PDE6D-204ENST00000477748 KIF22Q14807 665 aa17.14■□□□□ 0.33
PDE6D-204ENST00000477748 SCYL3Q8IZE3 742 aa17.14■□□□□ 0.33
PDE6D-204ENST00000477748 MIGA1Q8NAN2 632 aa17.14■□□□□ 0.33
PDE6D-204ENST00000477748 ARMC5Q96C12 935 aa17.14■□□□□ 0.33
PDE6D-204ENST00000477748 EDC3Q96F86 508 aaKnown RBP17.14■□□□□ 0.33
PDE6D-204ENST00000477748 PAG1Q9NWQ8 432 aa17.14■□□□□ 0.33
PDE6D-204ENST00000477748 KIAA0100Q14667 2235 aaKnown RBP17.14■□□□□ 0.33
PDE6D-204ENST00000477748 GNRH1P01148 92 aa17.13■□□□□ 0.33
PDE6D-204ENST00000477748 SLURP2P0DP57 97 aa17.13■□□□□ 0.33
PDE6D-204ENST00000477748 SLC9C2Q5TAH2 1124 aa17.13■□□□□ 0.33
PDE6D-204ENST00000477748 PPP4R3CPQ6ZMV5 832 aa17.13■□□□□ 0.33
PDE6D-204ENST00000477748 CERS3Q8IU89 383 aa17.13■□□□□ 0.33
PDE6D-204ENST00000477748 MAPKAPK5Q8IW41 473 aa17.13■□□□□ 0.33
PDE6D-204ENST00000477748 HAUS7Q99871 368 aa17.13■□□□□ 0.33
PDE6D-204ENST00000477748 ECHDC1Q9NTX5 307 aa17.13■□□□□ 0.33
PDE6D-204ENST00000477748 SUPT16HQ9Y5B9 1047 aaKnown RBP17.13■□□□□ 0.33
PDE6D-204ENST00000477748 PDHXO00330 501 aa17.12■□□□□ 0.33
PDE6D-204ENST00000477748 TBC1D12O60347 775 aa17.12■□□□□ 0.33
PDE6D-204ENST00000477748 CTNND1O60716 968 aaKnown RBP17.12■□□□□ 0.33
PDE6D-204ENST00000477748 PDE6AP16499 860 aa17.12■□□□□ 0.33
PDE6D-204ENST00000477748 LACTBP83111 547 aaPredicted RBP17.12■□□□□ 0.33
PDE6D-204ENST00000477748 AAMPQ13685 434 aa17.12■□□□□ 0.33
PDE6D-204ENST00000477748 GPATCH3Q96I76 525 aa17.12■□□□□ 0.33
PDE6D-204ENST00000477748 PARK7Q99497 189 aaKnown RBP17.12■□□□□ 0.33
PDE6D-204ENST00000477748 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.12■□□□□ 0.33
PDE6D-204ENST00000477748 FLT1P17948 1338 aa17.12■□□□□ 0.33
PDE6D-204ENST00000477748 FAM196BA6NMK8 535 aa17.11■□□□□ 0.33
PDE6D-204ENST00000477748 PTPRAP18433 802 aa17.11■□□□□ 0.33
PDE6D-204ENST00000477748 USP5P45974 858 aa17.11■□□□□ 0.33
PDE6D-204ENST00000477748 CAP1Q01518 475 aa17.11■□□□□ 0.33
PDE6D-204ENST00000477748 MOGSQ13724 837 aa17.11■□□□□ 0.33
PDE6D-204ENST00000477748 FASTKD5Q7L8L6 764 aaKnown RBP17.11■□□□□ 0.33
PDE6D-204ENST00000477748 DHX36Q9H2U1 1008 aaKnown RBP17.11■□□□□ 0.33
PDE6D-204ENST00000477748 PI4KBQ9UBF8 816 aa17.11■□□□□ 0.33
PDE6D-204ENST00000477748 ZBTB47Q9UFB7 747 aaPredicted RBP17.11■□□□□ 0.33
PDE6D-204ENST00000477748 ZNF532Q9HCE3 1301 aa17.11■□□□□ 0.33
PDE6D-204ENST00000477748 MYH1P12882 1939 aa17.11■□□□□ 0.33
PDE6D-204ENST00000477748 MYH7P12883 1935 aa17.11■□□□□ 0.33
PDE6D-204ENST00000477748 DOCK1Q14185 1865 aa17.1■□□□□ 0.33
PDE6D-204ENST00000477748 A0A0G2JLL6 359 aaPredicted RBP17.1■□□□□ 0.33
PDE6D-204ENST00000477748 MAGEB6P1A0A0J9YX57 407 aa17.1■□□□□ 0.33
PDE6D-204ENST00000477748 PRMT2P55345 433 aa17.1■□□□□ 0.33
PDE6D-204ENST00000477748 C17orf99Q6UX52 265 aa17.1■□□□□ 0.33
PDE6D-204ENST00000477748 PRRT2Q7Z6L0 340 aaPredicted RBP17.1■□□□□ 0.33
PDE6D-204ENST00000477748 NBPF11Q86T75 865 aa17.1■□□□□ 0.33
PDE6D-204ENST00000477748 EXOC6Q8TAG9 804 aa17.1■□□□□ 0.33
PDE6D-204ENST00000477748 GCC1Q96CN9 775 aa17.1■□□□□ 0.33
PDE6D-204ENST00000477748 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.1■□□□□ 0.33
PDE6D-204ENST00000477748 SAP30BPQ9UHR5 308 aaKnown RBP17.1■□□□□ 0.33
PDE6D-204ENST00000477748 ZHX2Q9Y6X8 837 aa17.1■□□□□ 0.33
PDE6D-204ENST00000477748 ADGRA2Q96PE1 1338 aa17.1■□□□□ 0.33
PDE6D-204ENST00000477748 HDAC1Q13547 482 aaPredicted RBP17.09■□□□□ 0.33
PDE6D-204ENST00000477748 SLC9C1Q4G0N8 1177 aa17.09■□□□□ 0.33
PDE6D-204ENST00000477748 ZNF333Q96JL9 665 aa17.09■□□□□ 0.33
PDE6D-204ENST00000477748 RIOK1Q9BRS2 568 aaKnown RBP17.09■□□□□ 0.33
PDE6D-204ENST00000477748 HERC5Q9UII4 1024 aaKnown RBP17.09■□□□□ 0.33
PDE6D-204ENST00000477748 PALD1Q9ULE6 856 aa17.09■□□□□ 0.33
PDE6D-204ENST00000477748 SLC45A1Q9Y2W3 748 aa17.09■□□□□ 0.33
PDE6D-204ENST00000477748 AFG3L2Q9Y4W6 797 aa17.09■□□□□ 0.33
PDE6D-204ENST00000477748 SIPA1L1O43166 1804 aa17.08■□□□□ 0.33
PDE6D-204ENST00000477748 TCRBV5S4A2TA0A5A2 114 aa17.08■□□□□ 0.32
PDE6D-204ENST00000477748 HLA-DOAP06340 250 aa17.08■□□□□ 0.32
PDE6D-204ENST00000477748 ADD2P35612 726 aa17.08■□□□□ 0.32
PDE6D-204ENST00000477748 ANKRD45Q5TZF3 282 aa17.08■□□□□ 0.32
PDE6D-204ENST00000477748 TSHZ3Q63HK5 1081 aa17.08■□□□□ 0.32
PDE6D-204ENST00000477748 CRACR2BQ8N4Y2 399 aaPredicted RBP17.08■□□□□ 0.32
PDE6D-204ENST00000477748 TRIM34Q9BYJ4 488 aa17.08■□□□□ 0.32
PDE6D-204ENST00000477748 CPA4Q9UI42 421 aa17.08■□□□□ 0.32
PDE6D-204ENST00000477748 PTCH2Q9Y6C5 1203 aa17.08■□□□□ 0.32
PDE6D-204ENST00000477748 ATAD5Q96QE3 1844 aa17.07■□□□□ 0.32
PDE6D-204ENST00000477748 SLC4A8Q2Y0W8 1093 aa17.07■□□□□ 0.32
PDE6D-204ENST00000477748 ZSCAN25Q6NSZ9 544 aa17.07■□□□□ 0.32
PDE6D-204ENST00000477748 GPAT2Q6NUI2 795 aa17.07■□□□□ 0.32
PDE6D-204ENST00000477748 FOXP4Q8IVH2 680 aaPredicted RBP17.07■□□□□ 0.32
PDE6D-204ENST00000477748 TBC1D2Q9BYX2 928 aa17.07■□□□□ 0.32
PDE6D-204ENST00000477748 CRNKL1Q9BZJ0 848 aaKnown RBP17.07■□□□□ 0.32
PDE6D-204ENST00000477748 ARHGAP39Q9C0H5 1083 aa17.07■□□□□ 0.32
PDE6D-204ENST00000477748 TTC41PQ6P2S7 1318 aa17.06■□□□□ 0.32
PDE6D-204ENST00000477748 HOXD10P28358 340 aa17.06■□□□□ 0.32
PDE6D-204ENST00000477748 SLFNL1Q499Z3 407 aa17.06■□□□□ 0.32
PDE6D-204ENST00000477748 TMEM106CQ9BVX2 250 aa17.06■□□□□ 0.32
PDE6D-204ENST00000477748 RWDD1Q9H446 243 aaPredicted RBP17.06■□□□□ 0.32
PDE6D-204ENST00000477748 NAV1Q8NEY1 1877 aa17.05■□□□□ 0.32
PDE6D-204ENST00000477748 PHIPQ8WWQ0 1821 aa17.05■□□□□ 0.32
PDE6D-204ENST00000477748 RBBP6Q7Z6E9 1792 aaKnown RBP17.05■□□□□ 0.32
PDE6D-204ENST00000477748 POTEFA5A3E0 1075 aa17.05■□□□□ 0.32
PDE6D-204ENST00000477748 TRIM75PA6NK02 468 aa17.05■□□□□ 0.32
PDE6D-204ENST00000477748 ERC2O15083 957 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms