RNA–Protein interactions for RNA: ENST00000477693.1

NIFK-205, Transcript of nucleolar protein interacting with the FHA domain of MKI67, humanhuman

TSL 1 (best)

Gene NIFK, Length 1,096 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIFK-205ENST00000477693 SPRYD7Q5W111 196 aa11.82□□□□□ -0.52
NIFK-205ENST00000477693 TSHZ3Q63HK5 1081 aa11.82□□□□□ -0.52
NIFK-205ENST00000477693 MIGA2Q7L4E1 593 aa11.82□□□□□ -0.52
NIFK-205ENST00000477693 ZSCAN29Q8IWY8 852 aaPredicted RBP11.82□□□□□ -0.52
NIFK-205ENST00000477693 MIGA1Q8NAN2 632 aa11.82□□□□□ -0.52
NIFK-205ENST00000477693 OTUD7AQ8TE49 926 aaPredicted RBP11.82□□□□□ -0.52
NIFK-205ENST00000477693 WRNIP1Q96S55 665 aa11.82□□□□□ -0.52
NIFK-205ENST00000477693 RIOK1Q9BRS2 568 aaKnown RBP11.82□□□□□ -0.52
NIFK-205ENST00000477693 ZNF341Q9BYN7 854 aa11.82□□□□□ -0.52
NIFK-205ENST00000477693 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.82□□□□□ -0.52
NIFK-205ENST00000477693 ZNF112Q9UJU3 913 aa11.82□□□□□ -0.52
NIFK-205ENST00000477693 FLT1P17948 1338 aa11.82□□□□□ -0.52
NIFK-205ENST00000477693 ZNF532Q9HCE3 1301 aa11.82□□□□□ -0.52
NIFK-205ENST00000477693 CCDC85CA6NKD9 419 aa11.81□□□□□ -0.52
NIFK-205ENST00000477693 CA12O43570 354 aa11.81□□□□□ -0.52
NIFK-205ENST00000477693 DYNLL1P63167 89 aaKnown RBP11.81□□□□□ -0.52
NIFK-205ENST00000477693 VGLL4Q14135 290 aa11.81□□□□□ -0.52
NIFK-205ENST00000477693 UBE3CQ15386 1083 aa11.81□□□□□ -0.52
NIFK-205ENST00000477693 PLEKHM2Q8IWE5 1019 aa11.81□□□□□ -0.52
NIFK-205ENST00000477693 KBTBD3Q8NAB2 608 aa11.81□□□□□ -0.52
NIFK-205ENST00000477693 TGFBRAP1Q8WUH2 860 aa11.81□□□□□ -0.52
NIFK-205ENST00000477693 WNK4Q96J92 1243 aa11.81□□□□□ -0.52
NIFK-205ENST00000477693 BEGAINQ9BUH8 593 aa11.81□□□□□ -0.52
NIFK-205ENST00000477693 DHX36Q9H2U1 1008 aaKnown RBP11.81□□□□□ -0.52
NIFK-205ENST00000477693 CSADQ9Y600 493 aa11.81□□□□□ -0.52
NIFK-205ENST00000477693 LAMB1P07942 1786 aa11.81□□□□□ -0.52
NIFK-205ENST00000477693 FOCADQ5VW36 1801 aa11.81□□□□□ -0.52
NIFK-205ENST00000477693 MAGEB6P1A0A0J9YX57 407 aa11.8□□□□□ -0.52
NIFK-205ENST00000477693 PHF20L1A8MW92 1017 aa11.8□□□□□ -0.52
NIFK-205ENST00000477693 TBC1D12O60347 775 aa11.8□□□□□ -0.52
NIFK-205ENST00000477693 PDE4AP27815 886 aa11.8□□□□□ -0.52
NIFK-205ENST00000477693 INPP5BP32019 993 aa11.8□□□□□ -0.52
NIFK-205ENST00000477693 GJA5P36382 358 aa11.8□□□□□ -0.52
NIFK-205ENST00000477693 PDE1AP54750 535 aa11.8□□□□□ -0.52
NIFK-205ENST00000477693 NOL9Q5SY16 702 aaKnown RBP11.8□□□□□ -0.52
NIFK-205ENST00000477693 ZSCAN25Q6NSZ9 544 aa11.8□□□□□ -0.52
NIFK-205ENST00000477693 ELP3Q9H9T3 547 aa11.8□□□□□ -0.52
NIFK-205ENST00000477693 SNCAIPQ9Y6H5 919 aa11.8□□□□□ -0.52
NIFK-205ENST00000477693 MANSC4A6NHS7 340 aaPredicted RBP11.79□□□□□ -0.52
NIFK-205ENST00000477693 SPDYE5A6NIY4 337 aa11.79□□□□□ -0.52
NIFK-205ENST00000477693 TM4SF4P48230 202 aa11.79□□□□□ -0.52
NIFK-205ENST00000477693 SREBF2Q12772 1141 aa11.79□□□□□ -0.52
NIFK-205ENST00000477693 METTL16Q86W50 562 aaKnown RBP11.79□□□□□ -0.52
NIFK-205ENST00000477693 ERO1BQ86YB8 467 aa11.79□□□□□ -0.52
NIFK-205ENST00000477693 MAPKAPK5Q8IW41 473 aa11.79□□□□□ -0.52
NIFK-205ENST00000477693 ZKSCAN4Q969J2 545 aaPredicted RBP11.79□□□□□ -0.52
NIFK-205ENST00000477693 OPTNQ96CV9 577 aa11.79□□□□□ -0.52
NIFK-205ENST00000477693 KIF12Q96FN5 646 aa11.79□□□□□ -0.52
NIFK-205ENST00000477693 SAGE1Q9NXZ1 904 aa11.79□□□□□ -0.52
NIFK-205ENST00000477693 PI4KBQ9UBF8 816 aa11.79□□□□□ -0.52
NIFK-205ENST00000477693 HERC5Q9UII4 1024 aaKnown RBP11.79□□□□□ -0.52
NIFK-205ENST00000477693 CDK5RAP2Q96SN8 1893 aa11.78□□□□□ -0.52
NIFK-205ENST00000477693 ZFYP08048 801 aaPredicted RBP11.78□□□□□ -0.52
NIFK-205ENST00000477693 HSPA8P11142 646 aaKnown RBP11.78□□□□□ -0.52
NIFK-205ENST00000477693 USP5P45974 858 aa11.78□□□□□ -0.52
NIFK-205ENST00000477693 INHBEP58166 350 aa11.78□□□□□ -0.52
NIFK-205ENST00000477693 MKRN3Q13064 507 aaKnown RBP11.78□□□□□ -0.52
NIFK-205ENST00000477693 CRNKL1Q9BZJ0 848 aaKnown RBP11.78□□□□□ -0.52
NIFK-205ENST00000477693 DDX60LQ5H9U9 1706 aaKnown RBP11.77□□□□□ -0.52
NIFK-205ENST00000477693 TESPA1A2RU30 521 aaPredicted RBP11.77□□□□□ -0.53
NIFK-205ENST00000477693 CTNND1O60716 968 aaKnown RBP11.77□□□□□ -0.53
NIFK-205ENST00000477693 CHGBP05060 677 aa11.77□□□□□ -0.53
NIFK-205ENST00000477693 RGS19P49795 217 aa11.77□□□□□ -0.53
NIFK-205ENST00000477693 PPATQ06203 517 aa11.77□□□□□ -0.53
NIFK-205ENST00000477693 LRRFIP1Q32MZ4 808 aaKnown RBP11.77□□□□□ -0.53
NIFK-205ENST00000477693 SLFNL1Q499Z3 407 aa11.77□□□□□ -0.53
NIFK-205ENST00000477693 TTC22Q5TAA0 569 aa11.77□□□□□ -0.53
NIFK-205ENST00000477693 SCYL3Q8IZE3 742 aa11.77□□□□□ -0.53
NIFK-205ENST00000477693 LCORLQ8N3X6 602 aa11.77□□□□□ -0.53
NIFK-205ENST00000477693 OTUD5Q96G74 571 aa11.77□□□□□ -0.53
NIFK-205ENST00000477693 MS4A4AQ96JQ5 239 aa11.77□□□□□ -0.53
NIFK-205ENST00000477693 PUS7LQ9H0K6 701 aaKnown RBP11.77□□□□□ -0.53
NIFK-205ENST00000477693 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.77□□□□□ -0.532e-7■■■□□ 15.1
NIFK-205ENST00000477693 PALD1Q9ULE6 856 aa11.77□□□□□ -0.53
NIFK-205ENST00000477693 MYH7P12883 1935 aa11.77□□□□□ -0.53
NIFK-205ENST00000477693 PDE4DIPQ5VU43 2346 aa11.77□□□□□ -0.53
NIFK-205ENST00000477693 SIPA1L1O43166 1804 aa11.76□□□□□ -0.53
NIFK-205ENST00000477693 AK9Q5TCS8 1911 aa11.76□□□□□ -0.53
NIFK-205ENST00000477693 RNF113AO15541 343 aaKnown RBP11.76□□□□□ -0.53
NIFK-205ENST00000477693 MBD4O95243 580 aa11.76□□□□□ -0.53
NIFK-205ENST00000477693 HLA-DOAP06340 250 aa11.76□□□□□ -0.53
NIFK-205ENST00000477693 SLURP2P0DP57 97 aa11.76□□□□□ -0.53
NIFK-205ENST00000477693 GTF2A2P52657 109 aa11.76□□□□□ -0.53
NIFK-205ENST00000477693 PPIL2Q13356 520 aa11.76□□□□□ -0.53
NIFK-205ENST00000477693 CASC1Q6TDU7 716 aa11.76□□□□□ -0.53
NIFK-205ENST00000477693 FOXP4Q8IVH2 680 aaPredicted RBP11.76□□□□□ -0.53
NIFK-205ENST00000477693 APPBP2Q92624 585 aa11.76□□□□□ -0.53
NIFK-205ENST00000477693 EHD4Q9H223 541 aa11.76□□□□□ -0.53
NIFK-205ENST00000477693 ARMT1Q9H993 441 aa11.76□□□□□ -0.53
NIFK-205ENST00000477693 DCP1AQ9NPI6 582 aaPredicted RBP11.76□□□□□ -0.53
NIFK-205ENST00000477693 RNF186Q9NXI6 227 aa11.76□□□□□ -0.53
NIFK-205ENST00000477693 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.76□□□□□ -0.53
NIFK-205ENST00000477693 FAM196BA6NMK8 535 aa11.75□□□□□ -0.53
NIFK-205ENST00000477693 IRF6O14896 467 aa11.75□□□□□ -0.53
NIFK-205ENST00000477693 PTPRAP18433 802 aa11.75□□□□□ -0.53
NIFK-205ENST00000477693 TTC6Q86TZ1 520 aa11.75□□□□□ -0.53
NIFK-205ENST00000477693 IFNL1Q8IU54 200 aa11.75□□□□□ -0.53
NIFK-205ENST00000477693 SDR42E1Q8WUS8 393 aa11.75□□□□□ -0.53
NIFK-205ENST00000477693 OSBP2Q969R2 916 aa11.75□□□□□ -0.53
NIFK-205ENST00000477693 EVI5LQ96CN4 794 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms