RNA–Protein interactions for RNA: ENST00000477541.1

HLA-DMA-208, Transcript of major histocompatibility complex, class II, DM alpha, humanhuman

Gene HLA-DMA, Length 1,735 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMA-208ENST00000477541 NBPF15Q8N660 670 aa15.46■□□□□ 0.07
HLA-DMA-208ENST00000477541 SMARCE1Q969G3 411 aa15.46■□□□□ 0.07
HLA-DMA-208ENST00000477541 CTAGE1Q96RT6 745 aa15.46■□□□□ 0.07
HLA-DMA-208ENST00000477541 CNNM2Q9H8M5 875 aa15.46■□□□□ 0.07
HLA-DMA-208ENST00000477541 ST7Q9NRC1 585 aa15.46■□□□□ 0.07
HLA-DMA-208ENST00000477541 INTS13Q9NVM9 706 aa15.46■□□□□ 0.07
HLA-DMA-208ENST00000477541 ARAP2Q8WZ64 1704 aa15.46■□□□□ 0.07
HLA-DMA-208ENST00000477541 A0A1B0GTH6 734 aa15.46■□□□□ 0.06
HLA-DMA-208ENST00000477541 FMNL1O95466 1100 aaPredicted RBP15.46■□□□□ 0.06
HLA-DMA-208ENST00000477541 OAS2P29728 719 aaKnown RBP15.46■□□□□ 0.06
HLA-DMA-208ENST00000477541 USP5P45974 858 aa15.46■□□□□ 0.06
HLA-DMA-208ENST00000477541 PLCD1P51178 756 aa15.46■□□□□ 0.06
HLA-DMA-208ENST00000477541 IRX5P78411 483 aaPredicted RBP15.46■□□□□ 0.06
HLA-DMA-208ENST00000477541 SSRP1Q08945 709 aaKnown RBP15.46■□□□□ 0.06
HLA-DMA-208ENST00000477541 LONRF3Q496Y0 759 aa15.46■□□□□ 0.06
HLA-DMA-208ENST00000477541 SRGAP1Q7Z6B7 1085 aa15.46■□□□□ 0.06
HLA-DMA-208ENST00000477541 IQUBQ8NA54 791 aa15.46■□□□□ 0.06
HLA-DMA-208ENST00000477541 SPATA20Q8TB22 786 aa15.46■□□□□ 0.06
HLA-DMA-208ENST00000477541 GBP3Q9H0R5 595 aa15.46■□□□□ 0.06
HLA-DMA-208ENST00000477541 TMEM51Q9NW97 253 aa15.46■□□□□ 0.06
HLA-DMA-208ENST00000477541 MAN1B1Q9UKM7 699 aa15.46■□□□□ 0.06
HLA-DMA-208ENST00000477541 TNS2Q63HR2 1409 aa15.45■□□□□ 0.06
HLA-DMA-208ENST00000477541 GOLGA8AA7E2F4 631 aa15.45■□□□□ 0.06
HLA-DMA-208ENST00000477541 TMEM232C9JQI7 657 aa15.45■□□□□ 0.06
HLA-DMA-208ENST00000477541 AKR1B15C9JRZ8 316 aaPredicted RBP15.45■□□□□ 0.06
HLA-DMA-208ENST00000477541 MAP2K7O14733 419 aa15.45■□□□□ 0.06
HLA-DMA-208ENST00000477541 FANCGO15287 622 aa15.45■□□□□ 0.06
HLA-DMA-208ENST00000477541 EIF3JO75822 258 aaKnown RBP15.45■□□□□ 0.06
HLA-DMA-208ENST00000477541 PCCAP05165 728 aaPredicted RBP15.45■□□□□ 0.06
HLA-DMA-208ENST00000477541 IFNAR1P17181 557 aa15.45■□□□□ 0.06
HLA-DMA-208ENST00000477541 HNRNPH2P55795 449 aaKnown RBP15.45■□□□□ 0.06
HLA-DMA-208ENST00000477541 NR1I3Q14994 352 aa15.45■□□□□ 0.06
HLA-DMA-208ENST00000477541 LMOD2Q6P5Q4 547 aa15.45■□□□□ 0.06
HLA-DMA-208ENST00000477541 FUT8Q9BYC5 575 aa15.45■□□□□ 0.06
HLA-DMA-208ENST00000477541 PUS7LQ9H0K6 701 aaKnown RBP15.45■□□□□ 0.06
HLA-DMA-208ENST00000477541 MYO1AQ9UBC5 1043 aa15.45■□□□□ 0.06
HLA-DMA-208ENST00000477541 RAB21Q9UL25 225 aa15.45■□□□□ 0.06
HLA-DMA-208ENST00000477541 IQSEC3Q9UPP2 1182 aaPredicted RBP15.45■□□□□ 0.06
HLA-DMA-208ENST00000477541 CCDC9Q9Y3X0 531 aaKnown RBP15.45■□□□□ 0.06
HLA-DMA-208ENST00000477541 NFE2L3Q9Y4A8 694 aa15.45■□□□□ 0.06
HLA-DMA-208ENST00000477541 ITIH6Q6UXX5 1313 aa15.44■□□□□ 0.06
HLA-DMA-208ENST00000477541 CDHR2Q9BYE9 1310 aa15.44■□□□□ 0.06
HLA-DMA-208ENST00000477541 CSF1RP07333 972 aa15.44■□□□□ 0.06
HLA-DMA-208ENST00000477541 FECHP22830 423 aa15.44■□□□□ 0.06
HLA-DMA-208ENST00000477541 ZAP70P43403 619 aa15.44■□□□□ 0.06
HLA-DMA-208ENST00000477541 MSANTD4Q8NCY6 345 aa15.44■□□□□ 0.06
HLA-DMA-208ENST00000477541 GOLGA5Q8TBA6 731 aa15.44■□□□□ 0.06
HLA-DMA-208ENST00000477541 PARD6BQ9BYG5 372 aa15.44■□□□□ 0.06
HLA-DMA-208ENST00000477541 RIC1Q4ADV7 1423 aa15.44■□□□□ 0.06
HLA-DMA-208ENST00000477541 MYO5AQ9Y4I1 1855 aaKnown RBP15.44■□□□□ 0.06
HLA-DMA-208ENST00000477541 BRWD3Q6RI45 1802 aa15.43■□□□□ 0.06
HLA-DMA-208ENST00000477541 DOCK2Q92608 1830 aa15.43■□□□□ 0.06
HLA-DMA-208ENST00000477541 UBN2Q6ZU65 1347 aa15.43■□□□□ 0.06
HLA-DMA-208ENST00000477541 PCDH11XQ9BZA7 1347 aa15.43■□□□□ 0.06
HLA-DMA-208ENST00000477541 PCDH11YQ9BZA8 1340 aa15.43■□□□□ 0.06
HLA-DMA-208ENST00000477541 CCDC196A0A1B0GTZ2 297 aa15.43■□□□□ 0.06
HLA-DMA-208ENST00000477541 KIF5CO60282 957 aa15.43■□□□□ 0.06
HLA-DMA-208ENST00000477541 PPFIA3O75145 1194 aa15.43■□□□□ 0.06
HLA-DMA-208ENST00000477541 BMP15O95972 392 aa15.43■□□□□ 0.06
HLA-DMA-208ENST00000477541 MMP1P03956 469 aa15.43■□□□□ 0.06
HLA-DMA-208ENST00000477541 PPP2R5BQ15173 497 aa15.43■□□□□ 0.06
HLA-DMA-208ENST00000477541 FOXP4Q8IVH2 680 aaPredicted RBP15.43■□□□□ 0.06
HLA-DMA-208ENST00000477541 TRIM22Q8IYM9 498 aa15.43■□□□□ 0.06
HLA-DMA-208ENST00000477541 IGDCC4Q8TDY8 1250 aa15.43■□□□□ 0.06
HLA-DMA-208ENST00000477541 WDR24Q96S15 920 aa15.43■□□□□ 0.06
HLA-DMA-208ENST00000477541 CDC23Q9UJX2 597 aa15.43■□□□□ 0.06
HLA-DMA-208ENST00000477541 FBXO2Q9UK22 296 aaPredicted RBP15.43■□□□□ 0.06
HLA-DMA-208ENST00000477541 SRPRBQ9Y5M8 271 aaKnown RBP15.43■□□□□ 0.06
HLA-DMA-208ENST00000477541 MYH3P11055 1940 aa15.43■□□□□ 0.06
HLA-DMA-208ENST00000477541 BMP6P22004 513 aa15.43■□□□□ 0.06
HLA-DMA-208ENST00000477541 CHMP4BP1P59074 171 aa15.43■□□□□ 0.06
HLA-DMA-208ENST00000477541 TCIRG1Q13488 830 aa15.43■□□□□ 0.06
HLA-DMA-208ENST00000477541 TTLL7Q6ZT98 887 aa15.43■□□□□ 0.06
HLA-DMA-208ENST00000477541 CNGA4Q8IV77 575 aa15.43■□□□□ 0.06
HLA-DMA-208ENST00000477541 PDILTQ8N807 584 aa15.43■□□□□ 0.06
HLA-DMA-208ENST00000477541 CCDC12Q8WUD4 166 aaPredicted RBP15.43■□□□□ 0.06
HLA-DMA-208ENST00000477541 ZNF594Q96JF6 807 aaPredicted RBP15.43■□□□□ 0.06
HLA-DMA-208ENST00000477541 PUS3Q9BZE2 481 aaKnown RBP15.43■□□□□ 0.06
HLA-DMA-208ENST00000477541 KRT23Q9C075 422 aa15.43■□□□□ 0.06
HLA-DMA-208ENST00000477541 NBPF3Q9H094 633 aa15.43■□□□□ 0.06
HLA-DMA-208ENST00000477541 LY9Q9HBG7 655 aa15.43■□□□□ 0.06
HLA-DMA-208ENST00000477541 TTF2Q9UNY4 1162 aaKnown RBP15.43■□□□□ 0.06
HLA-DMA-208ENST00000477541 SLIT2O94813 1529 aa15.42■□□□□ 0.06
HLA-DMA-208ENST00000477541 SASH3O75995 380 aa15.42■□□□□ 0.06
HLA-DMA-208ENST00000477541 UQCRFS1P1P0C7P4 283 aa15.42■□□□□ 0.06
HLA-DMA-208ENST00000477541 CSB-PGBD3P0DP91 1061 aa15.42■□□□□ 0.06
HLA-DMA-208ENST00000477541 YY1P25490 414 aa15.42■□□□□ 0.06
HLA-DMA-208ENST00000477541 ADORA1P30542 326 aa15.42■□□□□ 0.06
HLA-DMA-208ENST00000477541 PDE4BQ07343 736 aa15.42■□□□□ 0.06
HLA-DMA-208ENST00000477541 IFIT5Q13325 482 aaKnown RBP15.42■□□□□ 0.06
HLA-DMA-208ENST00000477541 TRIM14Q14142 442 aa15.42■□□□□ 0.06
HLA-DMA-208ENST00000477541 LONRF2Q1L5Z9 754 aa15.42■□□□□ 0.06
HLA-DMA-208ENST00000477541 FILIP1LQ4L180 1135 aa15.42■□□□□ 0.06
HLA-DMA-208ENST00000477541 SPATA1Q5VX52 437 aa15.42■□□□□ 0.06
HLA-DMA-208ENST00000477541 ISM2Q6H9L7 571 aa15.42■□□□□ 0.06
HLA-DMA-208ENST00000477541 CYB5R4Q7L1T6 521 aa15.42■□□□□ 0.06
HLA-DMA-208ENST00000477541 HDXQ7Z353 690 aa15.42■□□□□ 0.06
HLA-DMA-208ENST00000477541 PPFIBP1Q86W92 1011 aa15.42■□□□□ 0.06
HLA-DMA-208ENST00000477541 TBC1D10CQ8IV04 446 aa15.42■□□□□ 0.06
HLA-DMA-208ENST00000477541 TMTC2Q8N394 836 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms