RNA–Protein interactions for RNA: ENST00000477508.1

TOP3A-205, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 600 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-205ENST00000477508 PALD1Q9ULE6 856 aa15.74■□□□□ 0.11
TOP3A-205ENST00000477508 MYH1P12882 1939 aa15.73■□□□□ 0.11
TOP3A-205ENST00000477508 M0R2C6 588 aa15.73■□□□□ 0.11
TOP3A-205ENST00000477508 POLR3DP05423 398 aaPredicted RBP15.73■□□□□ 0.11
TOP3A-205ENST00000477508 CRACR2BQ8N4Y2 399 aaPredicted RBP15.73■□□□□ 0.11
TOP3A-205ENST00000477508 CAPNS2Q96L46 248 aa15.73■□□□□ 0.11
TOP3A-205ENST00000477508 EHD4Q9H223 541 aa15.73■□□□□ 0.11
TOP3A-205ENST00000477508 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.73■□□□□ 0.11
TOP3A-205ENST00000477508 MCM9Q9NXL9 1143 aa15.73■□□□□ 0.11
TOP3A-205ENST00000477508 SAP30BPQ9UHR5 308 aaKnown RBP15.73■□□□□ 0.11
TOP3A-205ENST00000477508 PATL2C9JE40 543 aaKnown RBP15.72■□□□□ 0.11
TOP3A-205ENST00000477508 PRKAB2O43741 272 aa15.72■□□□□ 0.11
TOP3A-205ENST00000477508 MAP2K2P36507 400 aa15.72■□□□□ 0.11
TOP3A-205ENST00000477508 NOGQ13253 232 aa15.72■□□□□ 0.11
TOP3A-205ENST00000477508 BMP2KLQ5H9B9 411 aa15.72■□□□□ 0.11
TOP3A-205ENST00000477508 SERPINB13Q9UIV8 391 aa15.72■□□□□ 0.11
TOP3A-205ENST00000477508 WDR33Q9C0J8 1336 aaKnown RBP15.71■□□□□ 0.11
TOP3A-205ENST00000477508 GSG1L2A8MUP6 293 aa15.71■□□□□ 0.11
TOP3A-205ENST00000477508 CTNND1O60716 968 aaKnown RBP15.71■□□□□ 0.11
TOP3A-205ENST00000477508 APPP05067 770 aa15.71■□□□□ 0.11
TOP3A-205ENST00000477508 SLC10A3P09131 477 aa15.71■□□□□ 0.11
TOP3A-205ENST00000477508 VEGFBP49765 207 aa15.71■□□□□ 0.11
TOP3A-205ENST00000477508 NMIQ13287 307 aaPredicted RBP15.71■□□□□ 0.11
TOP3A-205ENST00000477508 NOL9Q5SY16 702 aaKnown RBP15.71■□□□□ 0.11
TOP3A-205ENST00000477508 CYP4F22Q6NT55 531 aa15.71■□□□□ 0.11
TOP3A-205ENST00000477508 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.71■□□□□ 0.11
TOP3A-205ENST00000477508 REM2Q8IYK8 340 aaPredicted RBP15.71■□□□□ 0.11
TOP3A-205ENST00000477508 RUFY2Q8WXA3 655 aa15.71■□□□□ 0.11
TOP3A-205ENST00000477508 FAM227BQ96M60 508 aa15.71■□□□□ 0.11
TOP3A-205ENST00000477508 SEC62Q99442 399 aaKnown RBP15.71■□□□□ 0.11
TOP3A-205ENST00000477508 ARPP21Q9UBL0 812 aaPredicted RBP15.71■□□□□ 0.11
TOP3A-205ENST00000477508 FZD1Q9UP38 647 aa15.71■□□□□ 0.11
TOP3A-205ENST00000477508 NAV1Q8NEY1 1877 aa15.71■□□□□ 0.11
TOP3A-205ENST00000477508 A0A0D9SFI3 127 aa15.7■□□□□ 0.1
TOP3A-205ENST00000477508 PHF20L1A8MW92 1017 aa15.7■□□□□ 0.1
TOP3A-205ENST00000477508 USP17L12C9JPN9 530 aa15.7■□□□□ 0.1
TOP3A-205ENST00000477508 USP17L21D6R901 530 aa15.7■□□□□ 0.1
TOP3A-205ENST00000477508 ZBTB48P10074 688 aaPredicted RBP15.7■□□□□ 0.1
TOP3A-205ENST00000477508 VGLL4Q14135 290 aa15.7■□□□□ 0.1
TOP3A-205ENST00000477508 SBK1Q52WX2 424 aa15.7■□□□□ 0.1
TOP3A-205ENST00000477508 RASAL3Q86YV0 1011 aa15.7■□□□□ 0.1
TOP3A-205ENST00000477508 RNF39Q9H2S5 420 aa15.7■□□□□ 0.1
TOP3A-205ENST00000477508 GINM1Q9NU53 330 aa15.7■□□□□ 0.1
TOP3A-205ENST00000477508 SWAP70Q9UH65 585 aa15.7■□□□□ 0.1
TOP3A-205ENST00000477508 FAM155AB1AL88 458 aaPredicted RBP15.69■□□□□ 0.1
TOP3A-205ENST00000477508 TDO2P48775 406 aa15.69■□□□□ 0.1
TOP3A-205ENST00000477508 C12orf60Q5U649 245 aa15.69■□□□□ 0.1
TOP3A-205ENST00000477508 CWC27Q6UX04 472 aaKnown RBP15.69■□□□□ 0.1
TOP3A-205ENST00000477508 ERO1BQ86YB8 467 aa15.69■□□□□ 0.1
TOP3A-205ENST00000477508 IFNL3Q8IZI9 196 aa15.69■□□□□ 0.1
TOP3A-205ENST00000477508 CLMNQ96JQ2 1002 aa15.69■□□□□ 0.1
TOP3A-205ENST00000477508 PICK1Q9NRD5 415 aa15.69■□□□□ 0.1
TOP3A-205ENST00000477508 CCDC171Q6TFL3 1326 aa15.68■□□□□ 0.1
TOP3A-205ENST00000477508 SPDYE5A6NIY4 337 aa15.68■□□□□ 0.1
TOP3A-205ENST00000477508 INPP5BP32019 993 aa15.68■□□□□ 0.1
TOP3A-205ENST00000477508 PLCD1P51178 756 aa15.68■□□□□ 0.1
TOP3A-205ENST00000477508 GRM1Q13255 1194 aa15.68■□□□□ 0.1
TOP3A-205ENST00000477508 ALX1Q15699 326 aa15.68■□□□□ 0.1
TOP3A-205ENST00000477508 SPRYD7Q5W111 196 aa15.68■□□□□ 0.1
TOP3A-205ENST00000477508 CTR9Q6PD62 1173 aa15.68■□□□□ 0.1
TOP3A-205ENST00000477508 SCYL3Q8IZE3 742 aa15.68■□□□□ 0.1
TOP3A-205ENST00000477508 ZKSCAN4Q969J2 545 aaPredicted RBP15.68■□□□□ 0.1
TOP3A-205ENST00000477508 TBC1D2Q9BYX2 928 aa15.68■□□□□ 0.1
TOP3A-205ENST00000477508 NAPBQ9H115 298 aa15.68■□□□□ 0.1
TOP3A-205ENST00000477508 ELP3Q9H9T3 547 aa15.68■□□□□ 0.1
TOP3A-205ENST00000477508 SNCAIPQ9Y6H5 919 aa15.68■□□□□ 0.1
TOP3A-205ENST00000477508 DDX60LQ5H9U9 1706 aaKnown RBP15.68■□□□□ 0.1
TOP3A-205ENST00000477508 RAD50Q92878 1312 aa15.68■□□□□ 0.1
TOP3A-205ENST00000477508 BAZ2AQ9UIF9 1905 aaKnown RBP15.67■□□□□ 0.1
TOP3A-205ENST00000477508 SLC3A2P08195 630 aaKnown RBP15.67■□□□□ 0.1
TOP3A-205ENST00000477508 ASNSP08243 561 aa15.67■□□□□ 0.1
TOP3A-205ENST00000477508 CHMLP26374 656 aa15.67■□□□□ 0.1
TOP3A-205ENST00000477508 CAP2P40123 477 aa15.67■□□□□ 0.1
TOP3A-205ENST00000477508 INHBEP58166 350 aa15.67■□□□□ 0.1
TOP3A-205ENST00000477508 PPATQ06203 517 aa15.67■□□□□ 0.1
TOP3A-205ENST00000477508 GABPAQ06546 454 aa15.67■□□□□ 0.1
TOP3A-205ENST00000477508 TATDN1Q6P1N9 297 aa15.67■□□□□ 0.1
TOP3A-205ENST00000477508 CCDC129Q6ZRS4 1044 aa15.67■□□□□ 0.1
TOP3A-205ENST00000477508 JMYQ8N9B5 988 aa15.67■□□□□ 0.1
TOP3A-205ENST00000477508 OPTNQ96CV9 577 aa15.67■□□□□ 0.1
TOP3A-205ENST00000477508 WNK4Q96J92 1243 aa15.67■□□□□ 0.1
TOP3A-205ENST00000477508 ZNF287Q9HBT7 754 aa15.67■□□□□ 0.1
TOP3A-205ENST00000477508 OTOFQ9HC10 1997 aa15.67■□□□□ 0.1
TOP3A-205ENST00000477508 MANSC4A6NHS7 340 aaPredicted RBP15.66■□□□□ 0.1
TOP3A-205ENST00000477508 FAM196BA6NMK8 535 aa15.66■□□□□ 0.1
TOP3A-205ENST00000477508 MAP2K1Q02750 393 aaPredicted RBP15.66■□□□□ 0.1
TOP3A-205ENST00000477508 PPIL2Q13356 520 aa15.66■□□□□ 0.1
TOP3A-205ENST00000477508 SLC4A8Q2Y0W8 1093 aa15.66■□□□□ 0.1
TOP3A-205ENST00000477508 DNAJC18Q9H819 358 aa15.66■□□□□ 0.1
TOP3A-205ENST00000477508 EPB41L4AQ9HCS5 686 aaPredicted RBP15.66■□□□□ 0.1
TOP3A-205ENST00000477508 SIPA1L1O43166 1804 aa15.66■□□□□ 0.1
TOP3A-205ENST00000477508 ZMYM6O95789 1325 aa15.66■□□□□ 0.1
TOP3A-205ENST00000477508 MINDY4BA8MYZ0 360 aa15.65■□□□□ 0.1
TOP3A-205ENST00000477508 CYP2D6P10635 497 aa15.65■□□□□ 0.1
TOP3A-205ENST00000477508 HSPD1P10809 573 aaKnown RBP15.65■□□□□ 0.1
TOP3A-205ENST00000477508 SREBF2Q12772 1141 aa15.65■□□□□ 0.1
TOP3A-205ENST00000477508 CERKLQ49MI3 558 aaPredicted RBP15.65■□□□□ 0.1
TOP3A-205ENST00000477508 CASC1Q6TDU7 716 aa15.65■□□□□ 0.1
TOP3A-205ENST00000477508 C16orf86Q6ZW13 317 aa15.65■□□□□ 0.1
TOP3A-205ENST00000477508 ZNF589Q86UQ0 364 aaPredicted RBP15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms