RNA–Protein interactions for RNA: ENST00000477169.5

SMARCD3-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 5

Gene SMARCD3, Length 802 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-210ENST00000477169 NUCB1Q02818 461 aa20.92■□□□□ 0.94
SMARCD3-210ENST00000477169 KIF22Q14807 665 aa20.92■□□□□ 0.94
SMARCD3-210ENST00000477169 C17orf99Q6UX52 265 aa20.92■□□□□ 0.94
SMARCD3-210ENST00000477169 FASTKD5Q7L8L6 764 aaKnown RBP20.92■□□□□ 0.94
SMARCD3-210ENST00000477169 SH3RF3Q8TEJ3 882 aaPredicted RBP20.92■□□□□ 0.94
SMARCD3-210ENST00000477169 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.92■□□□□ 0.94
SMARCD3-210ENST00000477169 ZBTB47Q9UFB7 747 aaPredicted RBP20.92■□□□□ 0.94
SMARCD3-210ENST00000477169 AFG3L2Q9Y4W6 797 aa20.92■□□□□ 0.94
SMARCD3-210ENST00000477169 HTTP42858 3142 aa20.92■□□□□ 0.94
SMARCD3-210ENST00000477169 A0A0G2JLL6 359 aaPredicted RBP20.91■□□□□ 0.94
SMARCD3-210ENST00000477169 LACTBP83111 547 aaPredicted RBP20.91■□□□□ 0.94
SMARCD3-210ENST00000477169 PRRT2Q7Z6L0 340 aaPredicted RBP20.91■□□□□ 0.94
SMARCD3-210ENST00000477169 OTUD7AQ8TE49 926 aaPredicted RBP20.91■□□□□ 0.94
SMARCD3-210ENST00000477169 AATFQ9NY61 560 aaKnown RBP eCLIP20.91■□□□□ 0.94
SMARCD3-210ENST00000477169 GNRH1P01148 92 aa20.9■□□□□ 0.94
SMARCD3-210ENST00000477169 ERICH6BQ5W0A0 696 aa20.9■□□□□ 0.94
SMARCD3-210ENST00000477169 GPAT2Q6NUI2 795 aa20.9■□□□□ 0.94
SMARCD3-210ENST00000477169 CHD1LQ86WJ1 897 aa20.9■□□□□ 0.94
SMARCD3-210ENST00000477169 ARMC5Q96C12 935 aa20.9■□□□□ 0.94
SMARCD3-210ENST00000477169 LNPKQ9C0E8 428 aa20.9■□□□□ 0.94
SMARCD3-210ENST00000477169 DHX36Q9H2U1 1008 aaKnown RBP20.9■□□□□ 0.94
SMARCD3-210ENST00000477169 PIH1D3Q9NQM4 214 aaKnown RBP20.9■□□□□ 0.94
SMARCD3-210ENST00000477169 ATP5JP18859 108 aa20.89■□□□□ 0.93
SMARCD3-210ENST00000477169 ADGRA1Q86SQ6 560 aa20.89■□□□□ 0.93
SMARCD3-210ENST00000477169 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.89■□□□□ 0.93
SMARCD3-210ENST00000477169 PI4KBQ9UBF8 816 aa20.89■□□□□ 0.93
SMARCD3-210ENST00000477169 CPA4Q9UI42 421 aa20.89■□□□□ 0.93
SMARCD3-210ENST00000477169 HERC5Q9UII4 1024 aaKnown RBP20.89■□□□□ 0.93
SMARCD3-210ENST00000477169 MAST2Q6P0Q8 1798 aa20.89■□□□□ 0.93
SMARCD3-210ENST00000477169 DOCK1Q14185 1865 aa20.88■□□□□ 0.93
SMARCD3-210ENST00000477169 SALL3Q9BXA9 1300 aa20.88■□□□□ 0.93
SMARCD3-210ENST00000477169 PARK7Q99497 189 aaKnown RBP20.88■□□□□ 0.93
SMARCD3-210ENST00000477169 ARHGAP39Q9C0H5 1083 aa20.88■□□□□ 0.93
SMARCD3-210ENST00000477169 ECHDC1Q9NTX5 307 aa20.88■□□□□ 0.93
SMARCD3-210ENST00000477169 MYO5AQ9Y4I1 1855 aaKnown RBP20.88■□□□□ 0.93
SMARCD3-210ENST00000477169 ADGRA2Q96PE1 1338 aa20.87■□□□□ 0.93
SMARCD3-210ENST00000477169 CENPFP49454 3210 aa20.87■□□□□ 0.93
SMARCD3-210ENST00000477169 FAM196BA6NMK8 535 aa20.87■□□□□ 0.93
SMARCD3-210ENST00000477169 PRMT2P55345 433 aa20.87■□□□□ 0.93
SMARCD3-210ENST00000477169 TMED8Q6PL24 325 aaPredicted RBP20.87■□□□□ 0.93
SMARCD3-210ENST00000477169 NBPF11Q86T75 865 aa20.87■□□□□ 0.93
SMARCD3-210ENST00000477169 TGFBRAP1Q8WUH2 860 aa20.87■□□□□ 0.93
SMARCD3-210ENST00000477169 GPATCH3Q96I76 525 aa20.87■□□□□ 0.93
SMARCD3-210ENST00000477169 SLC45A1Q9Y2W3 748 aa20.87■□□□□ 0.93
SMARCD3-210ENST00000477169 PTCH2Q9Y6C5 1203 aa20.87■□□□□ 0.93
SMARCD3-210ENST00000477169 NDUFB9Q9Y6M9 179 aa20.87■□□□□ 0.93
SMARCD3-210ENST00000477169 IDH1O75874 414 aaKnown RBP20.86■□□□□ 0.93
SMARCD3-210ENST00000477169 CYP7A1P22680 504 aa20.86■□□□□ 0.93
SMARCD3-210ENST00000477169 CAP2P40123 477 aa20.86■□□□□ 0.93
SMARCD3-210ENST00000477169 TSHZ3Q63HK5 1081 aa20.86■□□□□ 0.93
SMARCD3-210ENST00000477169 GADL1Q6ZQY3 521 aa20.86■□□□□ 0.93
SMARCD3-210ENST00000477169 CERS3Q8IU89 383 aa20.86■□□□□ 0.93
SMARCD3-210ENST00000477169 CCDC136Q96JN2 1154 aa20.86■□□□□ 0.93
SMARCD3-210ENST00000477169 TBC1D2Q9BYX2 928 aa20.86■□□□□ 0.93
SMARCD3-210ENST00000477169 BOLA2Q9H3K6 86 aa20.86■□□□□ 0.93
SMARCD3-210ENST00000477169 PHIPQ8WWQ0 1821 aa20.85■□□□□ 0.93
SMARCD3-210ENST00000477169 TRIM75PA6NK02 468 aa20.85■□□□□ 0.93
SMARCD3-210ENST00000477169 MX1P20591 662 aa20.85■□□□□ 0.93
SMARCD3-210ENST00000477169 SLC9C1Q4G0N8 1177 aa20.85■□□□□ 0.93
SMARCD3-210ENST00000477169 FOXP4Q8IVH2 680 aaPredicted RBP20.85■□□□□ 0.93
SMARCD3-210ENST00000477169 MAPKAPK5Q8IW41 473 aa20.85■□□□□ 0.93
SMARCD3-210ENST00000477169 FLT1P17948 1338 aa20.84■□□□□ 0.93
SMARCD3-210ENST00000477169 TTC41PQ6P2S7 1318 aa20.84■□□□□ 0.93
SMARCD3-210ENST00000477169 CYP2C8P10632 490 aa20.84■□□□□ 0.93
SMARCD3-210ENST00000477169 BCRP11274 1271 aa20.84■□□□□ 0.93
SMARCD3-210ENST00000477169 PSMC4P43686 418 aa20.84■□□□□ 0.93
SMARCD3-210ENST00000477169 MAP3K12Q12852 859 aa20.84■□□□□ 0.93
SMARCD3-210ENST00000477169 CENPQQ7L2Z9 268 aaPredicted RBP20.84■□□□□ 0.93
SMARCD3-210ENST00000477169 METTL16Q86W50 562 aaKnown RBP20.84■□□□□ 0.93
SMARCD3-210ENST00000477169 ZNF333Q96JL9 665 aa20.84■□□□□ 0.93
SMARCD3-210ENST00000477169 HAUS7Q99871 368 aa20.84■□□□□ 0.93
SMARCD3-210ENST00000477169 ANTXR1Q9H6X2 564 aa20.84■□□□□ 0.93
SMARCD3-210ENST00000477169 FRMD4AQ9P2Q2 1039 aaPredicted RBP20.84■□□□□ 0.93
SMARCD3-210ENST00000477169 STAP2Q9UGK3 403 aa20.84■□□□□ 0.93
SMARCD3-210ENST00000477169 PTPRFP10586 1907 aa20.83■□□□□ 0.93
SMARCD3-210ENST00000477169 HOXD10P28358 340 aa20.83■□□□□ 0.93
SMARCD3-210ENST00000477169 PDE1AP54750 535 aa20.83■□□□□ 0.93
SMARCD3-210ENST00000477169 DYNLL1P63167 89 aaKnown RBP20.83■□□□□ 0.93
SMARCD3-210ENST00000477169 RRP1BQ14684 758 aaKnown RBP20.83■□□□□ 0.93
SMARCD3-210ENST00000477169 CCDC84Q86UT8 332 aaPredicted RBP20.83■□□□□ 0.93
SMARCD3-210ENST00000477169 MAGEB6Q8N7X4 407 aa20.83■□□□□ 0.93
SMARCD3-210ENST00000477169 ZNF280CQ8ND82 737 aa20.83■□□□□ 0.93
SMARCD3-210ENST00000477169 PI4K2BQ8TCG2 481 aa20.83■□□□□ 0.93
SMARCD3-210ENST00000477169 DNAJC2Q99543 621 aaKnown RBP20.83■□□□□ 0.93
SMARCD3-210ENST00000477169 PPP4R2Q9NY27 417 aa20.83■□□□□ 0.93
SMARCD3-210ENST00000477169 CDK5RAP2Q96SN8 1893 aa20.82■□□□□ 0.92
SMARCD3-210ENST00000477169 POTEFA5A3E0 1075 aa20.82■□□□□ 0.92
SMARCD3-210ENST00000477169 USP17L5A8MUK1 530 aa20.82■□□□□ 0.92
SMARCD3-210ENST00000477169 FMNL1O95466 1100 aaPredicted RBP20.82■□□□□ 0.92
SMARCD3-210ENST00000477169 CTGFP29279 349 aa20.82■□□□□ 0.92
SMARCD3-210ENST00000477169 SPP2Q13103 211 aa20.82■□□□□ 0.92
SMARCD3-210ENST00000477169 TTF1Q15361 905 aaPredicted RBP20.82■□□□□ 0.92
SMARCD3-210ENST00000477169 PROCA1Q8NCQ7 364 aaPredicted RBP20.82■□□□□ 0.92
SMARCD3-210ENST00000477169 EDC3Q96F86 508 aaKnown RBP20.82■□□□□ 0.92
SMARCD3-210ENST00000477169 TRIM47Q96LD4 638 aa20.82■□□□□ 0.92
SMARCD3-210ENST00000477169 TMEM106CQ9BVX2 250 aa20.82■□□□□ 0.92
SMARCD3-210ENST00000477169 SRRDQ9UH36 339 aa20.82■□□□□ 0.92
SMARCD3-210ENST00000477169 PALD1Q9ULE6 856 aa20.82■□□□□ 0.92
SMARCD3-210ENST00000477169 AGTPBP1Q9UPW5 1226 aa20.82■□□□□ 0.92
SMARCD3-210ENST00000477169 FOCADQ5VW36 1801 aa20.82■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms