RNA–Protein interactions for RNA: ENST00000476862.1

ABCB1-204, Transcript of ATP binding cassette subfamily B member 1, humanhuman

TSL 3

Gene ABCB1, Length 582 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCB1-204ENST00000476862 CPA4Q9UI42 421 aa21.94■■□□□ 1.1
ABCB1-204ENST00000476862 AFG3L2Q9Y4W6 797 aa21.94■■□□□ 1.1
ABCB1-204ENST00000476862 COL2A1P02458 1487 aaPredicted RBP21.94■■□□□ 1.1
ABCB1-204ENST00000476862 MYO5AQ9Y4I1 1855 aaKnown RBP21.94■■□□□ 1.1
ABCB1-204ENST00000476862 TRIM75PA6NK02 468 aa21.93■■□□□ 1.1
ABCB1-204ENST00000476862 FAM196BA6NMK8 535 aa21.93■■□□□ 1.1
ABCB1-204ENST00000476862 USP5P45974 858 aa21.93■■□□□ 1.1
ABCB1-204ENST00000476862 LACTBP83111 547 aaPredicted RBP21.93■■□□□ 1.1
ABCB1-204ENST00000476862 PDE3AQ14432 1141 aa21.93■■□□□ 1.1
ABCB1-204ENST00000476862 SLC9C1Q4G0N8 1177 aa21.93■■□□□ 1.1
ABCB1-204ENST00000476862 MAGEB6Q8N7X4 407 aa21.93■■□□□ 1.1
ABCB1-204ENST00000476862 AS3MTQ9HBK9 375 aa21.93■■□□□ 1.1
ABCB1-204ENST00000476862 A0A0G2JLL6 359 aaPredicted RBP21.92■■□□□ 1.1
ABCB1-204ENST00000476862 ECM2O94769 699 aaPredicted RBP21.92■■□□□ 1.1
ABCB1-204ENST00000476862 FMNL1O95466 1100 aaPredicted RBP21.92■■□□□ 1.1
ABCB1-204ENST00000476862 PRMT2P55345 433 aa21.92■■□□□ 1.1
ABCB1-204ENST00000476862 C17orf99Q6UX52 265 aa21.92■■□□□ 1.1
ABCB1-204ENST00000476862 PRRT2Q7Z6L0 340 aaPredicted RBP21.92■■□□□ 1.1
ABCB1-204ENST00000476862 FOXP4Q8IVH2 680 aaPredicted RBP21.92■■□□□ 1.1
ABCB1-204ENST00000476862 TMEM106CQ9BVX2 250 aa21.92■■□□□ 1.1
ABCB1-204ENST00000476862 SLURP2P0DP57 97 aa21.91■■□□□ 1.1
ABCB1-204ENST00000476862 SMCR8Q8TEV9 937 aaPredicted RBP21.91■■□□□ 1.1
ABCB1-204ENST00000476862 FLT1P17948 1338 aa21.9■■□□□ 1.1
ABCB1-204ENST00000476862 USP17L5A8MUK1 530 aa21.9■■□□□ 1.1
ABCB1-204ENST00000476862 CAP2P40123 477 aa21.9■■□□□ 1.1
ABCB1-204ENST00000476862 PSMC4P43686 418 aa21.9■■□□□ 1.1
ABCB1-204ENST00000476862 PNMA3Q9UL41 463 aa21.9■■□□□ 1.1
ABCB1-204ENST00000476862 SLC45A1Q9Y2W3 748 aa21.9■■□□□ 1.1
ABCB1-204ENST00000476862 DYNLL1P63167 89 aaKnown RBP21.89■■□□□ 1.09
ABCB1-204ENST00000476862 SPP2Q13103 211 aa21.89■■□□□ 1.09
ABCB1-204ENST00000476862 PABPC4Q13310 644 aaKnown RBP eCLIP21.89■■□□□ 1.09
ABCB1-204ENST00000476862 GPAT2Q6NUI2 795 aa21.89■■□□□ 1.09
ABCB1-204ENST00000476862 ADGRA1Q86SQ6 560 aa21.89■■□□□ 1.09
ABCB1-204ENST00000476862 MIGA1Q8NAN2 632 aa21.89■■□□□ 1.09
ABCB1-204ENST00000476862 ZNF280CQ8ND82 737 aa21.89■■□□□ 1.09
ABCB1-204ENST00000476862 DNAJC2Q99543 621 aaKnown RBP21.89■■□□□ 1.09
ABCB1-204ENST00000476862 SAP30BPQ9UHR5 308 aaKnown RBP21.89■■□□□ 1.09
ABCB1-204ENST00000476862 PALD1Q9ULE6 856 aa21.89■■□□□ 1.09
ABCB1-204ENST00000476862 PTCH2Q9Y6C5 1203 aa21.89■■□□□ 1.09
ABCB1-204ENST00000476862 NDUFB9Q9Y6M9 179 aa21.89■■□□□ 1.09
ABCB1-204ENST00000476862 ASNSP08243 561 aa21.88■■□□□ 1.09
ABCB1-204ENST00000476862 CYP2C8P10632 490 aa21.88■■□□□ 1.09
ABCB1-204ENST00000476862 MOGSQ13724 837 aa21.88■■□□□ 1.09
ABCB1-204ENST00000476862 ARMC5Q96C12 935 aa21.88■■□□□ 1.09
ABCB1-204ENST00000476862 ANTXR1Q9H6X2 564 aa21.88■■□□□ 1.09
ABCB1-204ENST00000476862 ATAD5Q96QE3 1844 aa21.87■■□□□ 1.09
ABCB1-204ENST00000476862 FCGRTP55899 365 aa21.87■■□□□ 1.09
ABCB1-204ENST00000476862 SLC4A8Q2Y0W8 1093 aa21.87■■□□□ 1.09
ABCB1-204ENST00000476862 CCDC84Q86UT8 332 aaPredicted RBP21.87■■□□□ 1.09
ABCB1-204ENST00000476862 RAET1EQ8TD07 263 aa21.87■■□□□ 1.09
ABCB1-204ENST00000476862 PPIL4Q8WUA2 492 aaKnown RBP eCLIP21.87■■□□□ 1.09
ABCB1-204ENST00000476862 ARHGAP39Q9C0H5 1083 aa21.87■■□□□ 1.09
ABCB1-204ENST00000476862 GINM1Q9NU53 330 aa21.87■■□□□ 1.09
ABCB1-204ENST00000476862 AGTPBP1Q9UPW5 1226 aa21.87■■□□□ 1.09
ABCB1-204ENST00000476862 MYH1P12882 1939 aa21.86■■□□□ 1.09
ABCB1-204ENST00000476862 CDK5RAP2Q96SN8 1893 aa21.86■■□□□ 1.09
ABCB1-204ENST00000476862 OSBPP22059 807 aa21.86■■□□□ 1.09
ABCB1-204ENST00000476862 SLC9C2Q5TAH2 1124 aa21.86■■□□□ 1.09
ABCB1-204ENST00000476862 TTC6Q86TZ1 520 aa21.86■■□□□ 1.09
ABCB1-204ENST00000476862 SIRT2Q8IXJ6 389 aa21.86■■□□□ 1.09
ABCB1-204ENST00000476862 PROCA1Q8NCQ7 364 aaPredicted RBP21.86■■□□□ 1.09
ABCB1-204ENST00000476862 TMOD4Q9NZQ9 345 aa21.86■■□□□ 1.09
ABCB1-204ENST00000476862 FRMD4AQ9P2Q2 1039 aaPredicted RBP21.86■■□□□ 1.09
ABCB1-204ENST00000476862 FOCADQ5VW36 1801 aa21.85■■□□□ 1.09
ABCB1-204ENST00000476862 PHIPQ8WWQ0 1821 aa21.85■■□□□ 1.09
ABCB1-204ENST00000476862 PTPRFP10586 1907 aa21.85■■□□□ 1.09
ABCB1-204ENST00000476862 MAGEB6P1A0A0J9YX57 407 aa21.85■■□□□ 1.09
ABCB1-204ENST00000476862 GOLIM4O00461 696 aa21.85■■□□□ 1.09
ABCB1-204ENST00000476862 LRRCC1Q9C099 1032 aa21.85■■□□□ 1.09
ABCB1-204ENST00000476862 SRRDQ9UH36 339 aa21.85■■□□□ 1.09
ABCB1-204ENST00000476862 CAP1Q01518 475 aa21.84■■□□□ 1.09
ABCB1-204ENST00000476862 C20orf194Q5TEA3 1177 aa21.84■■□□□ 1.09
ABCB1-204ENST00000476862 CRNKL1Q9BZJ0 848 aaKnown RBP21.84■■□□□ 1.09
ABCB1-204ENST00000476862 BIN2Q9UBW5 565 aaPredicted RBP21.84■■□□□ 1.09
ABCB1-204ENST00000476862 MYPNQ86TC9 1320 aa21.83■■□□□ 1.09
ABCB1-204ENST00000476862 POLR3DP05423 398 aaPredicted RBP21.83■■□□□ 1.09
ABCB1-204ENST00000476862 HMGCS2P54868 508 aa21.83■■□□□ 1.09
ABCB1-204ENST00000476862 ZNF333Q96JL9 665 aa21.83■■□□□ 1.09
ABCB1-204ENST00000476862 TRIM47Q96LD4 638 aa21.83■■□□□ 1.09
ABCB1-204ENST00000476862 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.83■■□□□ 1.09
ABCB1-204ENST00000476862 BOLA2Q9H3K6 86 aa21.83■■□□□ 1.09
ABCB1-204ENST00000476862 KIAA0100Q14667 2235 aaKnown RBP21.83■■□□□ 1.08
ABCB1-204ENST00000476862 ADGRA2Q96PE1 1338 aa21.82■■□□□ 1.08
ABCB1-204ENST00000476862 PDE4DIPQ5VU43 2346 aa21.82■■□□□ 1.08
ABCB1-204ENST00000476862 GDF11O95390 407 aa21.82■■□□□ 1.08
ABCB1-204ENST00000476862 MYCP01106 439 aaPredicted RBP21.82■■□□□ 1.08
ABCB1-204ENST00000476862 BCRP11274 1271 aa21.82■■□□□ 1.08
ABCB1-204ENST00000476862 SH3TC2Q8TF17 1288 aa21.82■■□□□ 1.08
ABCB1-204ENST00000476862 WDR18Q9BV38 432 aa21.82■■□□□ 1.08
ABCB1-204ENST00000476862 POTEFA5A3E0 1075 aa21.81■■□□□ 1.08
ABCB1-204ENST00000476862 C19orf81C9J6K1 198 aa21.81■■□□□ 1.08
ABCB1-204ENST00000476862 PDE6AP16499 860 aa21.81■■□□□ 1.08
ABCB1-204ENST00000476862 METTL16Q86W50 562 aaKnown RBP21.81■■□□□ 1.08
ABCB1-204ENST00000476862 CABP5Q9NP86 173 aa21.81■■□□□ 1.08
ABCB1-204ENST00000476862 PAG1Q9NWQ8 432 aa21.81■■□□□ 1.08
ABCB1-204ENST00000476862 SERPINB13Q9UIV8 391 aa21.81■■□□□ 1.08
ABCB1-204ENST00000476862 ZSWIM8A7E2V4 1837 aa21.8■■□□□ 1.08
ABCB1-204ENST00000476862 MGAMO43451 1857 aa21.8■■□□□ 1.08
ABCB1-204ENST00000476862 USP17L10C9JJH3 530 aa21.8■■□□□ 1.08
ABCB1-204ENST00000476862 TNPO2O14787 897 aaKnown RBP21.8■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 538.5 ms