RNA–Protein interactions for RNA: ENST00000476625.5

HDAC6-219, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 967 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-219ENST00000476625 ZNF316A6NFI3 1004 aaPredicted RBP14.86□□□□□ -0.03
HDAC6-219ENST00000476625 SEMA3EO15041 775 aa14.86□□□□□ -0.03
HDAC6-219ENST00000476625 MNX1P50219 401 aaPredicted RBP14.86□□□□□ -0.03
HDAC6-219ENST00000476625 IRF5Q13568 498 aa14.86□□□□□ -0.03
HDAC6-219ENST00000476625 Q7L0L9 218 aa14.86□□□□□ -0.03
HDAC6-219ENST00000476625 PXYLP1Q8TE99 480 aa14.86□□□□□ -0.03
HDAC6-219ENST00000476625 CRISPLD2Q9H0B8 497 aa14.86□□□□□ -0.03
HDAC6-219ENST00000476625 COPRSQ9NQ92 184 aa14.86□□□□□ -0.03
HDAC6-219ENST00000476625 HMG20BQ9P0W2 317 aa14.86□□□□□ -0.03
HDAC6-219ENST00000476625 SLC45A1Q9Y2W3 748 aa14.86□□□□□ -0.03
HDAC6-219ENST00000476625 NR2E3Q9Y5X4 410 aa14.86□□□□□ -0.03
HDAC6-219ENST00000476625 GPR75-ASB3A0A0A6YYF3 556 aa14.85□□□□□ -0.03
HDAC6-219ENST00000476625 ALDH1L2Q3SY69 923 aa14.85□□□□□ -0.03
HDAC6-219ENST00000476625 SH3RF3Q8TEJ3 882 aaPredicted RBP14.85□□□□□ -0.03
HDAC6-219ENST00000476625 NEUROD6Q96NK8 337 aa14.85□□□□□ -0.03
HDAC6-219ENST00000476625 ERICH6Q7L0X2 663 aa14.84□□□□□ -0.03
HDAC6-219ENST00000476625 SLC17A8Q8NDX2 589 aa14.84□□□□□ -0.03
HDAC6-219ENST00000476625 TRIB2Q92519 343 aa14.84□□□□□ -0.03
HDAC6-219ENST00000476625 COA7Q96BR5 231 aa14.84□□□□□ -0.03
HDAC6-219ENST00000476625 NSUN4Q96CB9 384 aaKnown RBP14.84□□□□□ -0.03
HDAC6-219ENST00000476625 FAM163AQ96GL9 167 aaPredicted RBP14.84□□□□□ -0.03
HDAC6-219ENST00000476625 OSBPL5Q9H0X9 879 aaPredicted RBP14.84□□□□□ -0.03
HDAC6-219ENST00000476625 ASCC2Q9H1I8 757 aaPredicted RBP14.84□□□□□ -0.03
HDAC6-219ENST00000476625 FBXO3Q9UK99 471 aa14.84□□□□□ -0.03
HDAC6-219ENST00000476625 GJD2Q9UKL4 321 aa14.84□□□□□ -0.03
HDAC6-219ENST00000476625 DLL1O00548 723 aa14.83□□□□□ -0.04
HDAC6-219ENST00000476625 SRGAP3O43295 1099 aa14.83□□□□□ -0.04
HDAC6-219ENST00000476625 CYP2B6P20813 491 aa14.83□□□□□ -0.04
HDAC6-219ENST00000476625 FAM110CQ1W6H9 321 aa14.83□□□□□ -0.04
HDAC6-219ENST00000476625 ZGPATQ8N5A5 531 aaKnown RBP14.83□□□□□ -0.04
HDAC6-219ENST00000476625 ZNF280CQ8ND82 737 aa14.83□□□□□ -0.04
HDAC6-219ENST00000476625 DNAJC18Q9H819 358 aa14.83□□□□□ -0.04
HDAC6-219ENST00000476625 TXNRD2Q9NNW7 524 aa14.83□□□□□ -0.04
HDAC6-219ENST00000476625 SNRKQ9NRH2 765 aa14.83□□□□□ -0.04
HDAC6-219ENST00000476625 MYH1P12882 1939 aa14.82□□□□□ -0.04
HDAC6-219ENST00000476625 GDF11O95390 407 aa14.82□□□□□ -0.04
HDAC6-219ENST00000476625 MCAMP43121 646 aa14.82□□□□□ -0.04
HDAC6-219ENST00000476625 MTMR2Q13614 643 aa14.82□□□□□ -0.04
HDAC6-219ENST00000476625 POTEEQ6S8J3 1075 aa14.82□□□□□ -0.04
HDAC6-219ENST00000476625 ADGRA1Q86SQ6 560 aa14.82□□□□□ -0.04
HDAC6-219ENST00000476625 TRMT2AQ8IZ69 625 aaKnown RBP14.82□□□□□ -0.04
HDAC6-219ENST00000476625 SPATA5Q8NB90 893 aa14.82□□□□□ -0.04
HDAC6-219ENST00000476625 PROCA1Q8NCQ7 364 aaPredicted RBP14.82□□□□□ -0.04
HDAC6-219ENST00000476625 RAI14Q9P0K7 980 aa14.82□□□□□ -0.04
HDAC6-219ENST00000476625 PDS5AQ29RF7 1337 aaKnown RBP14.82□□□□□ -0.04
HDAC6-219ENST00000476625 HMGCRP04035 888 aa14.81□□□□□ -0.04
HDAC6-219ENST00000476625 CAP2P40123 477 aa14.81□□□□□ -0.04
HDAC6-219ENST00000476625 NECAB2Q7Z6G3 386 aa14.81□□□□□ -0.04
HDAC6-219ENST00000476625 TEX11Q8IYF3 940 aa14.81□□□□□ -0.04
HDAC6-219ENST00000476625 GDF15Q99988 308 aa14.81□□□□□ -0.04
HDAC6-219ENST00000476625 PFASO15067 1338 aa14.81□□□□□ -0.04
HDAC6-219ENST00000476625 COL2A1P02458 1487 aaPredicted RBP14.81□□□□□ -0.04
HDAC6-219ENST00000476625 PNMA6EA0A0J9YXQ4 647 aa14.8□□□□□ -0.04
HDAC6-219ENST00000476625 TBC1D12O60347 775 aa14.8□□□□□ -0.04
HDAC6-219ENST00000476625 MAGEA10P43363 369 aaPredicted RBP14.8□□□□□ -0.04
HDAC6-219ENST00000476625 MVPQ14764 893 aaKnown RBP14.8□□□□□ -0.04
HDAC6-219ENST00000476625 CCL14Q16627 93 aa14.8□□□□□ -0.04
HDAC6-219ENST00000476625 SPTY2D1Q68D10 685 aaPredicted RBP14.8□□□□□ -0.04
HDAC6-219ENST00000476625 MAPKAPK5Q8IW41 473 aa14.8□□□□□ -0.04
HDAC6-219ENST00000476625 P2RX7Q99572 595 aaKnown RBP14.8□□□□□ -0.04
HDAC6-219ENST00000476625 AATFQ9NY61 560 aaKnown RBP eCLIP14.8□□□□□ -0.04
HDAC6-219ENST00000476625 PNMA3Q9UL41 463 aa14.8□□□□□ -0.04
HDAC6-219ENST00000476625 COL6A3P12111 3177 aa14.79□□□□□ -0.04
HDAC6-219ENST00000476625 USP17L5A8MUK1 530 aa14.79□□□□□ -0.04
HDAC6-219ENST00000476625 PRKAR2AP13861 404 aaKnown RBP14.79□□□□□ -0.04
HDAC6-219ENST00000476625 CCND3P30281 292 aaPredicted RBP14.79□□□□□ -0.04
HDAC6-219ENST00000476625 Q3C1V9 767 aa14.79□□□□□ -0.04
HDAC6-219ENST00000476625 SLF2Q8IX21 1173 aa14.79□□□□□ -0.04
HDAC6-219ENST00000476625 RPTORQ8N122 1335 aa14.79□□□□□ -0.04
HDAC6-219ENST00000476625 API5Q9BZZ5 524 aaKnown RBP14.79□□□□□ -0.04
HDAC6-219ENST00000476625 PORCNQ9H237 461 aa14.79□□□□□ -0.04
HDAC6-219ENST00000476625 C11orf49Q9H6J7 331 aa14.79□□□□□ -0.04
HDAC6-219ENST00000476625 HMX1Q9NP08 348 aaPredicted RBP14.79□□□□□ -0.04
HDAC6-219ENST00000476625 SAP30BPQ9UHR5 308 aaKnown RBP14.79□□□□□ -0.04
HDAC6-219ENST00000476625 NDUFB9Q9Y6M9 179 aa14.79□□□□□ -0.04
HDAC6-219ENST00000476625 ARID4AP29374 1257 aaPredicted RBP14.78□□□□□ -0.04
HDAC6-219ENST00000476625 DYNLL1P63167 89 aaKnown RBP14.78□□□□□ -0.04
HDAC6-219ENST00000476625 SH3D19Q5HYK7 790 aa14.78□□□□□ -0.04
HDAC6-219ENST00000476625 TGFBRAP1Q8WUH2 860 aa14.78□□□□□ -0.04
HDAC6-219ENST00000476625 LAMA3Q16787 3333 aa14.78□□□□□ -0.04
HDAC6-219ENST00000476625 FLT1P17948 1338 aa14.77□□□□□ -0.04
HDAC6-219ENST00000476625 A0A1W2PPC1 479 aa14.77□□□□□ -0.05
HDAC6-219ENST00000476625 ZBTB22O15209 634 aa14.77□□□□□ -0.05
HDAC6-219ENST00000476625 GCLCP48506 637 aaPredicted RBP14.77□□□□□ -0.05
HDAC6-219ENST00000476625 RARSP54136 660 aaKnown RBP14.77□□□□□ -0.05
HDAC6-219ENST00000476625 ZYXQ15942 572 aaKnown RBP14.77□□□□□ -0.05
HDAC6-219ENST00000476625 GORABQ5T7V8 394 aa14.77□□□□□ -0.05
HDAC6-219ENST00000476625 PAGR1Q9BTK6 254 aa14.77□□□□□ -0.05
HDAC6-219ENST00000476625 NBPF3Q9H094 633 aa14.77□□□□□ -0.05
HDAC6-219ENST00000476625 RBPJLQ9UBG7 517 aa14.77□□□□□ -0.05
HDAC6-219ENST00000476625 MORF4L1Q9UBU8 362 aa14.77□□□□□ -0.05
HDAC6-219ENST00000476625 PALD1Q9ULE6 856 aa14.77□□□□□ -0.05
HDAC6-219ENST00000476625 AKAP2Q9Y2D5 859 aa14.77□□□□□ -0.05
HDAC6-219ENST00000476625 LTBP2Q14767 1821 aa14.77□□□□□ -0.05
HDAC6-219ENST00000476625 NPM3O75607 178 aaKnown RBP14.76□□□□□ -0.05
HDAC6-219ENST00000476625 HERVK_113P62684 666 aa14.76□□□□□ -0.05
HDAC6-219ENST00000476625 IRX3P78415 501 aaPredicted RBP14.76□□□□□ -0.05
HDAC6-219ENST00000476625 CACNB2Q08289 660 aaPredicted RBP14.76□□□□□ -0.05
HDAC6-219ENST00000476625 MTX1Q13505 466 aa14.76□□□□□ -0.05
HDAC6-219ENST00000476625 LRRC26Q2I0M4 334 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms