RNA–Protein interactions for RNA: ENST00000475378.5

RNF220-212, Transcript of ring finger protein 220, humanhuman

TSL 3

Gene RNF220, Length 916 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-212ENST00000475378 MAP3K21Q5TCX8 1036 aa22.36■■□□□ 1.17
RNF220-212ENST00000475378 ZGPATQ8N5A5 531 aaKnown RBP22.36■■□□□ 1.17
RNF220-212ENST00000475378 TRIB2Q92519 343 aa22.36■■□□□ 1.17
RNF220-212ENST00000475378 COL25A1Q9BXS0 654 aaPredicted RBP22.36■■□□□ 1.17
RNF220-212ENST00000475378 MRS2Q9HD23 443 aa22.36■■□□□ 1.17
RNF220-212ENST00000475378 EYSQ5T1H1 3165 aa22.35■■□□□ 1.17
RNF220-212ENST00000475378 PICALMQ13492 652 aa22.35■■□□□ 1.17
RNF220-212ENST00000475378 UBE2OQ9C0C9 1292 aaKnown RBP22.35■■□□□ 1.17
RNF220-212ENST00000475378 CEP126Q9P2H0 1117 aa22.35■■□□□ 1.17
RNF220-212ENST00000475378 BTDP43251 543 aa22.34■■□□□ 1.17
RNF220-212ENST00000475378 RHBDL3P58872 404 aa22.34■■□□□ 1.17
RNF220-212ENST00000475378 SPP2Q13103 211 aa22.34■■□□□ 1.17
RNF220-212ENST00000475378 DZIP1Q86YF9 867 aaKnown RBP22.34■■□□□ 1.17
RNF220-212ENST00000475378 OSBPL5Q9H0X9 879 aaPredicted RBP22.34■■□□□ 1.17
RNF220-212ENST00000475378 SIL1Q9H173 461 aa22.34■■□□□ 1.17
RNF220-212ENST00000475378 ASCC2Q9H1I8 757 aaPredicted RBP22.34■■□□□ 1.17
RNF220-212ENST00000475378 COL2A1P02458 1487 aaPredicted RBP22.34■■□□□ 1.17
RNF220-212ENST00000475378 PDS5AQ29RF7 1337 aaKnown RBP22.33■■□□□ 1.17
RNF220-212ENST00000475378 FAM196BA6NMK8 535 aa22.33■■□□□ 1.17
RNF220-212ENST00000475378 NPM3O75607 178 aaKnown RBP22.33■■□□□ 1.17
RNF220-212ENST00000475378 COL6A1P12109 1028 aa22.33■■□□□ 1.17
RNF220-212ENST00000475378 ADORA1P30542 326 aa22.33■■□□□ 1.17
RNF220-212ENST00000475378 HMGCS2P54868 508 aa22.33■■□□□ 1.17
RNF220-212ENST00000475378 CCDC102BQ68D86 513 aa22.33■■□□□ 1.17
RNF220-212ENST00000475378 ZNF280CQ8ND82 737 aa22.33■■□□□ 1.17
RNF220-212ENST00000475378 MORF4L1Q9UBU8 362 aa22.33■■□□□ 1.17
RNF220-212ENST00000475378 SIPA1L1O43166 1804 aa22.33■■□□□ 1.16
RNF220-212ENST00000475378 MROH7-TTC4A0A0A0MT08 1334 aa22.32■■□□□ 1.16
RNF220-212ENST00000475378 PABPC4Q13310 644 aaKnown RBP eCLIP22.32■■□□□ 1.16
RNF220-212ENST00000475378 RASGRF1Q13972 1273 aa22.32■■□□□ 1.16
RNF220-212ENST00000475378 RRP1BQ14684 758 aaKnown RBP22.32■■□□□ 1.16
RNF220-212ENST00000475378 SH3D19Q5HYK7 790 aa22.32■■□□□ 1.16
RNF220-212ENST00000475378 SLF2Q8IX21 1173 aa22.32■■□□□ 1.16
RNF220-212ENST00000475378 TBC1D2Q9BYX2 928 aa22.32■■□□□ 1.16
RNF220-212ENST00000475378 GPR75-ASB3A0A0A6YYF3 556 aa22.31■■□□□ 1.16
RNF220-212ENST00000475378 ZNF384Q8TF68 577 aa22.31■■□□□ 1.16
RNF220-212ENST00000475378 XPO5Q9HAV4 1204 aaKnown RBP eCLIP22.31■■□□□ 1.16
RNF220-212ENST00000475378 ABCF2Q9UG63 623 aa22.31■■□□□ 1.16
RNF220-212ENST00000475378 MAST2Q6P0Q8 1798 aa22.3■■□□□ 1.16
RNF220-212ENST00000475378 PRKAR2AP13861 404 aaKnown RBP22.3■■□□□ 1.16
RNF220-212ENST00000475378 CYP2B6P20813 491 aa22.3■■□□□ 1.16
RNF220-212ENST00000475378 ZNF521Q96K83 1311 aa22.3■■□□□ 1.16
RNF220-212ENST00000475378 POTEB2H3BUK9 544 aa22.29■■□□□ 1.16
RNF220-212ENST00000475378 XRCC5P13010 732 aaKnown RBP22.29■■□□□ 1.16
RNF220-212ENST00000475378 CAP2P40123 477 aa22.29■■□□□ 1.16
RNF220-212ENST00000475378 IL15P40933 162 aaPredicted RBP22.29■■□□□ 1.16
RNF220-212ENST00000475378 PHF6Q8IWS0 365 aaKnown RBP eCLIP22.29■■□□□ 1.16
RNF220-212ENST00000475378 SPTBN5Q9NRC6 3674 aaKnown RBP22.29■■□□□ 1.16
RNF220-212ENST00000475378 CDK5RAP2Q96SN8 1893 aa22.28■■□□□ 1.16
RNF220-212ENST00000475378 MECOMQ03112 1051 aa22.28■■□□□ 1.16
RNF220-212ENST00000475378 LRRC26Q2I0M4 334 aa22.28■■□□□ 1.16
RNF220-212ENST00000475378 SPTY2D1Q68D10 685 aaPredicted RBP22.28■■□□□ 1.16
RNF220-212ENST00000475378 FAM109BQ6ICB4 259 aaPredicted RBP22.28■■□□□ 1.16
RNF220-212ENST00000475378 SSH1Q8WYL5 1049 aa22.28■■□□□ 1.16
RNF220-212ENST00000475378 GUCD1Q96NT3 240 aa22.28■■□□□ 1.16
RNF220-212ENST00000475378 PRUNE2Q8WUY3 3088 aa22.28■■□□□ 1.16
RNF220-212ENST00000475378 USP17L5A8MUK1 530 aa22.27■■□□□ 1.16
RNF220-212ENST00000475378 CACNB2Q08289 660 aaPredicted RBP22.27■■□□□ 1.16
RNF220-212ENST00000475378 LHX8Q68G74 356 aa22.27■■□□□ 1.16
RNF220-212ENST00000475378 NUDT12Q9BQG2 462 aa22.27■■□□□ 1.16
RNF220-212ENST00000475378 TXNRD2Q9NNW7 524 aa22.27■■□□□ 1.16
RNF220-212ENST00000475378 PA2G4Q9UQ80 394 aaKnown RBP22.27■■□□□ 1.16
RNF220-212ENST00000475378 PEX10O60683 326 aa22.26■■□□□ 1.15
RNF220-212ENST00000475378 SOCS4Q8WXH5 440 aa22.26■■□□□ 1.15
RNF220-212ENST00000475378 USP6NLQ92738 828 aa22.26■■□□□ 1.15
RNF220-212ENST00000475378 LTBP2Q14767 1821 aa22.25■■□□□ 1.15
RNF220-212ENST00000475378 MAP4K4O95819 1239 aaPredicted RBP22.25■■□□□ 1.15
RNF220-212ENST00000475378 HOXA7P31268 230 aaPredicted RBP22.25■■□□□ 1.15
RNF220-212ENST00000475378 TIMM10P62072 90 aa22.25■■□□□ 1.15
RNF220-212ENST00000475378 MDM2Q00987 491 aaPredicted RBP22.25■■□□□ 1.15
RNF220-212ENST00000475378 ERICH6Q7L0X2 663 aa22.25■■□□□ 1.15
RNF220-212ENST00000475378 P2RX7Q99572 595 aaKnown RBP22.25■■□□□ 1.15
RNF220-212ENST00000475378 WDR18Q9BV38 432 aa22.25■■□□□ 1.15
RNF220-212ENST00000475378 FOCADQ5VW36 1801 aa22.24■■□□□ 1.15
RNF220-212ENST00000475378 CCND3P30281 292 aaPredicted RBP22.24■■□□□ 1.15
RNF220-212ENST00000475378 TRMT44Q8IYL2 757 aaKnown RBP22.24■■□□□ 1.15
RNF220-212ENST00000475378 AS3MTQ9HBK9 375 aa22.24■■□□□ 1.15
RNF220-212ENST00000475378 COPRSQ9NQ92 184 aa22.24■■□□□ 1.15
RNF220-212ENST00000475378 CDH23Q9H251 3354 aa22.23■■□□□ 1.15
RNF220-212ENST00000475378 UBTFL1P0CB47 393 aaPredicted RBP22.23■■□□□ 1.15
RNF220-212ENST00000475378 ZKSCAN1P17029 563 aaPredicted RBP22.23■■□□□ 1.15
RNF220-212ENST00000475378 BACE1P56817 501 aa22.23■■□□□ 1.15
RNF220-212ENST00000475378 HERVK_113P62684 666 aa22.23■■□□□ 1.15
RNF220-212ENST00000475378 IRX3P78415 501 aaPredicted RBP22.23■■□□□ 1.15
RNF220-212ENST00000475378 MTMR2Q13614 643 aa22.23■■□□□ 1.15
RNF220-212ENST00000475378 GPRC5AQ8NFJ5 357 aa22.23■■□□□ 1.15
RNF220-212ENST00000475378 NSUN4Q96CB9 384 aaKnown RBP22.23■■□□□ 1.15
RNF220-212ENST00000475378 HERC5Q9UII4 1024 aaKnown RBP22.23■■□□□ 1.15
RNF220-212ENST00000475378 CCL14Q16627 93 aa22.22■■□□□ 1.15
RNF220-212ENST00000475378 Q3C1V9 767 aa22.22■■□□□ 1.15
RNF220-212ENST00000475378 MORN1Q5T089 497 aa22.22■■□□□ 1.15
RNF220-212ENST00000475378 XAGE2Q96GT9 111 aa22.22■■□□□ 1.15
RNF220-212ENST00000475378 RBPJLQ9UBG7 517 aa22.22■■□□□ 1.15
RNF220-212ENST00000475378 A0A1B0GUL7 405 aa22.21■■□□□ 1.15
RNF220-212ENST00000475378 MAPK4P31152 587 aa22.21■■□□□ 1.15
RNF220-212ENST00000475378 JAG1P78504 1218 aa22.21■■□□□ 1.15
RNF220-212ENST00000475378 POTEEQ6S8J3 1075 aa22.21■■□□□ 1.15
RNF220-212ENST00000475378 PORCNQ9H237 461 aa22.21■■□□□ 1.15
RNF220-212ENST00000475378 RLFQ13129 1914 aa22.2■■□□□ 1.14
RNF220-212ENST00000475378 LDHCP07864 332 aa22.2■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms