RNA–Protein interactions for RNA: ENST00000475329.5

TRAF4-210, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-210ENST00000475329 IGDCC4Q8TDY8 1250 aa16.13■□□□□ 0.17
TRAF4-210ENST00000475329 TNPO1Q92973 898 aaKnown RBP16.13■□□□□ 0.17
TRAF4-210ENST00000475329 LLPHQ9BRT6 129 aaKnown RBP16.13■□□□□ 0.17
TRAF4-210ENST00000475329 LY9Q9HBG7 655 aa16.13■□□□□ 0.17
TRAF4-210ENST00000475329 BRPF3Q9ULD4 1205 aa16.13■□□□□ 0.17
TRAF4-210ENST00000475329 SIPA1L1O43166 1804 aa16.12■□□□□ 0.17
TRAF4-210ENST00000475329 MYH15Q9Y2K3 1946 aa16.12■□□□□ 0.17
TRAF4-210ENST00000475329 PSMD14O00487 310 aa16.12■□□□□ 0.17
TRAF4-210ENST00000475329 RAD17O75943 681 aa16.12■□□□□ 0.17
TRAF4-210ENST00000475329 RBM5P52756 815 aaKnown RBP eCLIP16.12■□□□□ 0.178e-14■■■■□ 26.3
TRAF4-210ENST00000475329 EVX2Q03828 476 aa16.12■□□□□ 0.17
TRAF4-210ENST00000475329 WTAPQ15007 396 aa16.12■□□□□ 0.17
TRAF4-210ENST00000475329 NFXL1Q6ZNB6 911 aa16.12■□□□□ 0.17
TRAF4-210ENST00000475329 SGMS1Q86VZ5 419 aa16.12■□□□□ 0.17
TRAF4-210ENST00000475329 JDP2Q8WYK2 163 aa16.12■□□□□ 0.17
TRAF4-210ENST00000475329 SBF1O95248 1867 aa16.12■□□□□ 0.17
TRAF4-210ENST00000475329 CCDC69A6NI79 296 aa16.11■□□□□ 0.17
TRAF4-210ENST00000475329 DHX16O60231 1041 aaKnown RBP16.11■□□□□ 0.17
TRAF4-210ENST00000475329 PRDM1O75626 825 aa16.11■□□□□ 0.17
TRAF4-210ENST00000475329 WDHD1O75717 1129 aaPredicted RBP16.11■□□□□ 0.17
TRAF4-210ENST00000475329 CCT2P78371 535 aaKnown RBP16.11■□□□□ 0.17
TRAF4-210ENST00000475329 PKP1Q13835 747 aa16.11■□□□□ 0.17
TRAF4-210ENST00000475329 SLC4A8Q2Y0W8 1093 aa16.11■□□□□ 0.17
TRAF4-210ENST00000475329 APOA5Q6Q788 366 aa16.11■□□□□ 0.17
TRAF4-210ENST00000475329 IQCA1Q86XH1 822 aa16.11■□□□□ 0.17
TRAF4-210ENST00000475329 TMTC2Q8N394 836 aa16.11■□□□□ 0.17
TRAF4-210ENST00000475329 GBP4Q96PP9 640 aa16.11■□□□□ 0.17
TRAF4-210ENST00000475329 ZNF287Q9HBT7 754 aa16.11■□□□□ 0.17
TRAF4-210ENST00000475329 HDAC9Q9UKV0 1011 aa16.11■□□□□ 0.17
TRAF4-210ENST00000475329 WDR33Q9C0J8 1336 aaKnown RBP16.11■□□□□ 0.17
TRAF4-210ENST00000475329 ZBTB43O43298 467 aa16.1■□□□□ 0.17
TRAF4-210ENST00000475329 BRD1O95696 1058 aa16.1■□□□□ 0.17
TRAF4-210ENST00000475329 PDIA4P13667 645 aaKnown RBP16.1■□□□□ 0.17
TRAF4-210ENST00000475329 PDCP20941 246 aa16.1■□□□□ 0.17
TRAF4-210ENST00000475329 HMGN5P82970 282 aaKnown RBP16.1■□□□□ 0.17
TRAF4-210ENST00000475329 PICALMQ13492 652 aa16.1■□□□□ 0.17
TRAF4-210ENST00000475329 NBR1Q14596 966 aa16.1■□□□□ 0.17
TRAF4-210ENST00000475329 SYNE3Q6ZMZ3 975 aa16.1■□□□□ 0.17
TRAF4-210ENST00000475329 NSUN7Q8NE18 718 aaKnown RBP16.1■□□□□ 0.17
TRAF4-210ENST00000475329 AGBL3Q8NEM8 1001 aa16.1■□□□□ 0.17
TRAF4-210ENST00000475329 ZSCAN10Q96SZ4 725 aaPredicted RBP16.1■□□□□ 0.17
TRAF4-210ENST00000475329 GMLQ99445 158 aa16.1■□□□□ 0.17
TRAF4-210ENST00000475329 ZKSCAN3Q9BRR0 538 aa16.1■□□□□ 0.17
TRAF4-210ENST00000475329 NCOA5Q9HCD5 579 aaKnown RBP16.1■□□□□ 0.17
TRAF4-210ENST00000475329 HPS5Q9UPZ3 1129 aa16.1■□□□□ 0.17
TRAF4-210ENST00000475329 SLC12A7Q9Y666 1083 aa16.1■□□□□ 0.17
TRAF4-210ENST00000475329 TNKSO95271 1327 aa16.1■□□□□ 0.17
TRAF4-210ENST00000475329 NID2Q14112 1375 aa16.1■□□□□ 0.17
TRAF4-210ENST00000475329 TSPY2A6NKD2 308 aa16.09■□□□□ 0.17
TRAF4-210ENST00000475329 SYT1P21579 422 aa16.09■□□□□ 0.17
TRAF4-210ENST00000475329 METAP2P50579 478 aaKnown RBP eCLIP16.09■□□□□ 0.17
TRAF4-210ENST00000475329 PLCD1P51178 756 aa16.09■□□□□ 0.17
TRAF4-210ENST00000475329 RASSF7Q02833 373 aa16.09■□□□□ 0.17
TRAF4-210ENST00000475329 SEC23AQ15436 765 aa16.09■□□□□ 0.17
TRAF4-210ENST00000475329 CFAP100Q494V2 611 aa16.09■□□□□ 0.17
TRAF4-210ENST00000475329 CIAPIN1Q6FI81 312 aa16.09■□□□□ 0.17
TRAF4-210ENST00000475329 C16orf86Q6ZW13 317 aa16.09■□□□□ 0.17
TRAF4-210ENST00000475329 TTC6Q86TZ1 520 aa16.09■□□□□ 0.17
TRAF4-210ENST00000475329 SMARCC2Q8TAQ2 1214 aa16.09■□□□□ 0.17
TRAF4-210ENST00000475329 DYNLL2Q96FJ2 89 aa16.09■□□□□ 0.17
TRAF4-210ENST00000475329 OSBPL5Q9H0X9 879 aaPredicted RBP16.09■□□□□ 0.17
TRAF4-210ENST00000475329 MKNK2Q9HBH9 465 aa16.09■□□□□ 0.17
TRAF4-210ENST00000475329 SENP2Q9HC62 589 aa16.09■□□□□ 0.17
TRAF4-210ENST00000475329 DDX4Q9NQI0 724 aaKnown RBP16.09■□□□□ 0.17
TRAF4-210ENST00000475329 ZDHHC9Q9Y397 364 aa16.09■□□□□ 0.17
TRAF4-210ENST00000475329 KIF3AQ9Y496 699 aa16.09■□□□□ 0.17
TRAF4-210ENST00000475329 TCHHQ07283 1943 aa16.08■□□□□ 0.16
TRAF4-210ENST00000475329 GREB1LQ9C091 1923 aaPredicted RBP16.08■□□□□ 0.16
TRAF4-210ENST00000475329 PTPDC1A2A3K4 754 aa16.08■□□□□ 0.16
TRAF4-210ENST00000475329 GOLGA8AA7E2F4 631 aa16.08■□□□□ 0.16
TRAF4-210ENST00000475329 STX6O43752 255 aa16.08■□□□□ 0.16
TRAF4-210ENST00000475329 JAK2O60674 1132 aa16.08■□□□□ 0.16
TRAF4-210ENST00000475329 RCAN1P53805 252 aa16.08■□□□□ 0.16
TRAF4-210ENST00000475329 CXCL9Q07325 125 aa16.08■□□□□ 0.16
TRAF4-210ENST00000475329 TNIP1Q15025 636 aa16.08■□□□□ 0.16
TRAF4-210ENST00000475329 MICU3Q86XE3 530 aa16.08■□□□□ 0.16
TRAF4-210ENST00000475329 OGFOD1Q8N543 542 aa16.08■□□□□ 0.16
TRAF4-210ENST00000475329 ENAHQ8N8S7 591 aaPredicted RBP16.08■□□□□ 0.16
TRAF4-210ENST00000475329 FHDC1Q9C0D6 1143 aaPredicted RBP16.08■□□□□ 0.16
TRAF4-210ENST00000475329 COL2A1P02458 1487 aaPredicted RBP16.08■□□□□ 0.16
TRAF4-210ENST00000475329 CPLX1O14810 134 aa16.07■□□□□ 0.16
TRAF4-210ENST00000475329 NPM3O75607 178 aaKnown RBP16.07■□□□□ 0.16
TRAF4-210ENST00000475329 CTDNEP1O95476 244 aa16.07■□□□□ 0.16
TRAF4-210ENST00000475329 HLA-DOAP06340 250 aa16.07■□□□□ 0.16
TRAF4-210ENST00000475329 CDK8P49336 464 aa16.07■□□□□ 0.16
TRAF4-210ENST00000475329 CCDC178Q5BJE1 867 aa16.07■□□□□ 0.16
TRAF4-210ENST00000475329 FAM47AQ5JRC9 791 aa16.07■□□□□ 0.16
TRAF4-210ENST00000475329 IFIT1BQ5T764 474 aaKnown RBP16.07■□□□□ 0.16
TRAF4-210ENST00000475329 CLEC17AQ6ZS10 378 aa16.07■□□□□ 0.16
TRAF4-210ENST00000475329 RAB11FIP4Q86YS3 637 aa16.07■□□□□ 0.16
TRAF4-210ENST00000475329 ZNF654Q8IZM8 581 aa16.07■□□□□ 0.16
TRAF4-210ENST00000475329 ZNF444Q8N0Y2 327 aaPredicted RBP16.07■□□□□ 0.16
TRAF4-210ENST00000475329 FAM184AQ8NB25 1140 aa16.07■□□□□ 0.16
TRAF4-210ENST00000475329 IDI2Q9BXS1 227 aa16.07■□□□□ 0.16
TRAF4-210ENST00000475329 PCDHAC2Q9Y5I4 1007 aa16.07■□□□□ 0.16
TRAF4-210ENST00000475329 MYH4Q9Y623 1939 aa16.06■□□□□ 0.16
TRAF4-210ENST00000475329 CDKL5O76039 1030 aa16.06■□□□□ 0.16
TRAF4-210ENST00000475329 ZSCAN22P10073 491 aaPredicted RBP16.06■□□□□ 0.16
TRAF4-210ENST00000475329 RASA1P20936 1047 aa16.06■□□□□ 0.16
TRAF4-210ENST00000475329 MCM4P33991 863 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms