RNA–Protein interactions for RNA: ENST00000474828.1

SCAF11-206, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 757 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-206ENST00000474828 DNAJC18Q9H819 358 aa20.36■□□□□ 0.85
SCAF11-206ENST00000474828 PALD1Q9ULE6 856 aa20.36■□□□□ 0.85
SCAF11-206ENST00000474828 ZNF157P51786 506 aaPredicted RBP20.35■□□□□ 0.85
SCAF11-206ENST00000474828 NOGQ13253 232 aa20.35■□□□□ 0.85
SCAF11-206ENST00000474828 PRKG1Q13976 671 aa20.35■□□□□ 0.85
SCAF11-206ENST00000474828 VGLL4Q14135 290 aa20.35■□□□□ 0.85
SCAF11-206ENST00000474828 SBK1Q52WX2 424 aa20.35■□□□□ 0.85
SCAF11-206ENST00000474828 TNS4Q8IZW8 715 aa20.35■□□□□ 0.85
SCAF11-206ENST00000474828 CLMNQ96JQ2 1002 aa20.35■□□□□ 0.85
SCAF11-206ENST00000474828 SNCAIPQ9Y6H5 919 aa20.35■□□□□ 0.85
SCAF11-206ENST00000474828 NAV1Q8NEY1 1877 aa20.35■□□□□ 0.85
SCAF11-206ENST00000474828 A0A0D9SFI3 127 aa20.34■□□□□ 0.85
SCAF11-206ENST00000474828 HIP1O00291 1037 aa20.34■□□□□ 0.85
SCAF11-206ENST00000474828 TTC6Q86TZ1 520 aa20.34■□□□□ 0.85
SCAF11-206ENST00000474828 RILPL2Q969X0 211 aa20.34■□□□□ 0.85
SCAF11-206ENST00000474828 WRNIP1Q96S55 665 aa20.34■□□□□ 0.85
SCAF11-206ENST00000474828 SLC4A4Q9Y6R1 1079 aa20.34■□□□□ 0.85
SCAF11-206ENST00000474828 MYH1P12882 1939 aa20.33■□□□□ 0.85
SCAF11-206ENST00000474828 SPDYE5A6NIY4 337 aa20.33■□□□□ 0.85
SCAF11-206ENST00000474828 PATL2C9JE40 543 aaKnown RBP20.33■□□□□ 0.85
SCAF11-206ENST00000474828 CTNND1O60716 968 aaKnown RBP20.33■□□□□ 0.85
SCAF11-206ENST00000474828 SLURP2P0DP57 97 aa20.33■□□□□ 0.85
SCAF11-206ENST00000474828 ZBTB48P10074 688 aaPredicted RBP20.33■□□□□ 0.85
SCAF11-206ENST00000474828 PLCD1P51178 756 aa20.33■□□□□ 0.85
SCAF11-206ENST00000474828 MAPK8IP2Q13387 824 aaPredicted RBP20.33■□□□□ 0.85
SCAF11-206ENST00000474828 MCMDC2Q4G0Z9 681 aa20.33■□□□□ 0.85
SCAF11-206ENST00000474828 BMP2KLQ5H9B9 411 aa20.33■□□□□ 0.85
SCAF11-206ENST00000474828 C12orf60Q5U649 245 aa20.33■□□□□ 0.85
SCAF11-206ENST00000474828 SPRYD7Q5W111 196 aa20.33■□□□□ 0.85
SCAF11-206ENST00000474828 TATDN1Q6P1N9 297 aa20.33■□□□□ 0.85
SCAF11-206ENST00000474828 SLC10A4Q96EP9 437 aa20.33■□□□□ 0.85
SCAF11-206ENST00000474828 FAM227BQ96M60 508 aa20.33■□□□□ 0.85
SCAF11-206ENST00000474828 SERPINB13Q9UIV8 391 aa20.33■□□□□ 0.85
SCAF11-206ENST00000474828 HLA-DOAP06340 250 aa20.32■□□□□ 0.84
SCAF11-206ENST00000474828 INPP5BP32019 993 aa20.32■□□□□ 0.84
SCAF11-206ENST00000474828 NMIQ13287 307 aaPredicted RBP20.32■□□□□ 0.84
SCAF11-206ENST00000474828 ZKSCAN4Q969J2 545 aaPredicted RBP20.32■□□□□ 0.84
SCAF11-206ENST00000474828 EPB41L4AQ9HCS5 686 aaPredicted RBP20.32■□□□□ 0.84
SCAF11-206ENST00000474828 GINM1Q9NU53 330 aa20.32■□□□□ 0.84
SCAF11-206ENST00000474828 MCM9Q9NXL9 1143 aa20.32■□□□□ 0.84
SCAF11-206ENST00000474828 SAP30BPQ9UHR5 308 aaKnown RBP20.32■□□□□ 0.84
SCAF11-206ENST00000474828 GJA5P36382 358 aa20.31■□□□□ 0.84
SCAF11-206ENST00000474828 RRP1BQ14684 758 aaKnown RBP20.31■□□□□ 0.84
SCAF11-206ENST00000474828 ALX1Q15699 326 aa20.31■□□□□ 0.84
SCAF11-206ENST00000474828 CTR9Q6PD62 1173 aa20.31■□□□□ 0.84
SCAF11-206ENST00000474828 REM2Q8IYK8 340 aaPredicted RBP20.31■□□□□ 0.84
SCAF11-206ENST00000474828 WNK4Q96J92 1243 aa20.31■□□□□ 0.84
SCAF11-206ENST00000474828 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.31■□□□□ 0.84
SCAF11-206ENST00000474828 CSADQ9Y600 493 aa20.31■□□□□ 0.84
SCAF11-206ENST00000474828 ROBO3Q96MS0 1386 aa20.31■□□□□ 0.84
SCAF11-206ENST00000474828 ZMYM6O95789 1325 aa20.3■□□□□ 0.84
SCAF11-206ENST00000474828 AK9Q5TCS8 1911 aa20.3■□□□□ 0.84
SCAF11-206ENST00000474828 TESPA1A2RU30 521 aaPredicted RBP20.3■□□□□ 0.84
SCAF11-206ENST00000474828 USP17L12C9JPN9 530 aa20.3■□□□□ 0.84
SCAF11-206ENST00000474828 USP17L21D6R901 530 aa20.3■□□□□ 0.84
SCAF11-206ENST00000474828 CAPN15O75808 1086 aa20.3■□□□□ 0.84
SCAF11-206ENST00000474828 CAP2P40123 477 aa20.3■□□□□ 0.84
SCAF11-206ENST00000474828 SKAP1Q86WV1 359 aa20.3■□□□□ 0.84
SCAF11-206ENST00000474828 ERO1BQ86YB8 467 aa20.3■□□□□ 0.84
SCAF11-206ENST00000474828 SCYL3Q8IZE3 742 aa20.3■□□□□ 0.84
SCAF11-206ENST00000474828 ARPP21Q9UBL0 812 aaPredicted RBP20.3■□□□□ 0.84
SCAF11-206ENST00000474828 AOC2O75106 756 aa20.29■□□□□ 0.84
SCAF11-206ENST00000474828 SHMT1P34896 483 aa20.29■□□□□ 0.84
SCAF11-206ENST00000474828 PPATQ06203 517 aa20.29■□□□□ 0.84
SCAF11-206ENST00000474828 ZNF589Q86UQ0 364 aaPredicted RBP20.29■□□□□ 0.84
SCAF11-206ENST00000474828 IFNL3Q8IZI9 196 aa20.29■□□□□ 0.84
SCAF11-206ENST00000474828 ZIC5Q96T25 663 aa20.29■□□□□ 0.84
SCAF11-206ENST00000474828 CCDC171Q6TFL3 1326 aa20.28■□□□□ 0.84
SCAF11-206ENST00000474828 FAM196BA6NMK8 535 aa20.28■□□□□ 0.84
SCAF11-206ENST00000474828 POLR3DP05423 398 aaPredicted RBP20.28■□□□□ 0.84
SCAF11-206ENST00000474828 CHMLP26374 656 aa20.28■□□□□ 0.84
SCAF11-206ENST00000474828 TM4SF4P48230 202 aa20.28■□□□□ 0.84
SCAF11-206ENST00000474828 EVX2Q03828 476 aa20.28■□□□□ 0.84
SCAF11-206ENST00000474828 PPIL2Q13356 520 aa20.28■□□□□ 0.84
SCAF11-206ENST00000474828 CCDC129Q6ZRS4 1044 aa20.28■□□□□ 0.84
SCAF11-206ENST00000474828 OPTNQ96CV9 577 aa20.28■□□□□ 0.84
SCAF11-206ENST00000474828 DDRGK1Q96HY6 314 aa20.28■□□□□ 0.84
SCAF11-206ENST00000474828 MS4A4AQ96JQ5 239 aa20.28■□□□□ 0.84
SCAF11-206ENST00000474828 ELP3Q9H9T3 547 aa20.28■□□□□ 0.84
SCAF11-206ENST00000474828 KCNH4Q9UQ05 1017 aa20.28■□□□□ 0.84
SCAF11-206ENST00000474828 RAD50Q92878 1312 aa20.27■□□□□ 0.84
SCAF11-206ENST00000474828 DOCK1Q14185 1865 aa20.27■□□□□ 0.84
SCAF11-206ENST00000474828 CYP2D6P10635 497 aa20.27■□□□□ 0.84
SCAF11-206ENST00000474828 PTPRAP18433 802 aa20.27■□□□□ 0.84
SCAF11-206ENST00000474828 KIF23Q02241 960 aaPredicted RBP20.27■□□□□ 0.84
SCAF11-206ENST00000474828 VPS53Q5VIR6 699 aa20.27■□□□□ 0.84
SCAF11-206ENST00000474828 C16orf86Q6ZW13 317 aa20.27■□□□□ 0.84
SCAF11-206ENST00000474828 DIAPH3Q9NSV4 1193 aa20.27■□□□□ 0.84
SCAF11-206ENST00000474828 SWAP70Q9UH65 585 aa20.27■□□□□ 0.84
SCAF11-206ENST00000474828 BAZ2AQ9UIF9 1905 aaKnown RBP20.26■□□□□ 0.83
SCAF11-206ENST00000474828 MFAP1P55081 439 aaKnown RBP20.26■□□□□ 0.83
SCAF11-206ENST00000474828 INHBEP58166 350 aa20.26■□□□□ 0.83
SCAF11-206ENST00000474828 JAG1P78504 1218 aa20.26■□□□□ 0.83
SCAF11-206ENST00000474828 CRACR2BQ8N4Y2 399 aaPredicted RBP20.26■□□□□ 0.83
SCAF11-206ENST00000474828 CNKSR2Q8WXI2 1034 aa20.26■□□□□ 0.83
SCAF11-206ENST00000474828 TBC1D2Q9BYX2 928 aa20.26■□□□□ 0.83
SCAF11-206ENST00000474828 NACAP1Q9BZK3 213 aa20.26■□□□□ 0.83
SCAF11-206ENST00000474828 WBP1LQ9NX94 342 aa20.26■□□□□ 0.83
SCAF11-206ENST00000474828 ANAPC4Q9UJX5 808 aa20.26■□□□□ 0.83
SCAF11-206ENST00000474828 MANSC4A6NHS7 340 aaPredicted RBP20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms