RNA–Protein interactions for RNA: ENST00000474684.1

CPSF7-210, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 635 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-210ENST00000474684 RGS3P49796 1198 aa7.34□□□□□ -1.23
CPSF7-210ENST00000474684 TAF1CQ15572 869 aaPredicted RBP7.34□□□□□ -1.23
CPSF7-210ENST00000474684 FKBP1CQ5VVH2 108 aa7.34□□□□□ -1.23
CPSF7-210ENST00000474684 SH3BP5LQ7L8J4 393 aa7.34□□□□□ -1.23
CPSF7-210ENST00000474684 CCDC84Q86UT8 332 aaPredicted RBP7.34□□□□□ -1.23
CPSF7-210ENST00000474684 ARHGAP39Q9C0H5 1083 aa7.34□□□□□ -1.23
CPSF7-210ENST00000474684 DENND2AQ9ULE3 1009 aa7.34□□□□□ -1.23
CPSF7-210ENST00000474684 CSADQ9Y600 493 aa7.34□□□□□ -1.23
CPSF7-210ENST00000474684 COL11A1P12107 1806 aaPredicted RBP7.34□□□□□ -1.24
CPSF7-210ENST00000474684 MROH7-TTC4A0A0A0MT08 1334 aa7.33□□□□□ -1.24
CPSF7-210ENST00000474684 PDS5AQ29RF7 1337 aaKnown RBP7.33□□□□□ -1.24
CPSF7-210ENST00000474684 ADGRA2Q96PE1 1338 aa7.33□□□□□ -1.24
CPSF7-210ENST00000474684 RLFQ13129 1914 aa7.33□□□□□ -1.24
CPSF7-210ENST00000474684 COL2A1P02458 1487 aaPredicted RBP7.33□□□□□ -1.24
CPSF7-210ENST00000474684 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP7.33□□□□□ -1.24
CPSF7-210ENST00000474684 DDTLA6NHG4 134 aaPredicted RBP7.33□□□□□ -1.24
CPSF7-210ENST00000474684 UNCXA6NJT0 531 aa7.33□□□□□ -1.24
CPSF7-210ENST00000474684 FAM196BA6NMK8 535 aa7.33□□□□□ -1.24
CPSF7-210ENST00000474684 BTBD19C9JJ37 291 aa7.33□□□□□ -1.24
CPSF7-210ENST00000474684 SEMA3EO15041 775 aa7.33□□□□□ -1.24
CPSF7-210ENST00000474684 WDHD1O75717 1129 aaPredicted RBP7.33□□□□□ -1.24
CPSF7-210ENST00000474684 ALDH1A1P00352 501 aa7.33□□□□□ -1.24
CPSF7-210ENST00000474684 GNAI3P08754 354 aa7.33□□□□□ -1.24
CPSF7-210ENST00000474684 MCAMP43121 646 aa7.33□□□□□ -1.24
CPSF7-210ENST00000474684 BTDP43251 543 aa7.33□□□□□ -1.24
CPSF7-210ENST00000474684 MOGSQ13724 837 aa7.33□□□□□ -1.24
CPSF7-210ENST00000474684 ZKSCAN2Q63HK3 967 aa7.33□□□□□ -1.24
CPSF7-210ENST00000474684 TBC1D9Q6ZT07 1266 aa7.33□□□□□ -1.24
CPSF7-210ENST00000474684 DZIP1Q86YF9 867 aaKnown RBP7.33□□□□□ -1.24
CPSF7-210ENST00000474684 FAM151AQ8WW52 585 aa7.33□□□□□ -1.24
CPSF7-210ENST00000474684 ZFP91Q96JP5 570 aaPredicted RBP7.33□□□□□ -1.24
CPSF7-210ENST00000474684 MRIQ9BWK5 157 aa7.33□□□□□ -1.24
CPSF7-210ENST00000474684 ZNF341Q9BYN7 854 aa7.33□□□□□ -1.24
CPSF7-210ENST00000474684 TLR7Q9NYK1 1049 aaKnown RBP7.33□□□□□ -1.24
CPSF7-210ENST00000474684 HMG20BQ9P0W2 317 aa7.33□□□□□ -1.24
CPSF7-210ENST00000474684 ABCF2Q9UG63 623 aa7.33□□□□□ -1.24
CPSF7-210ENST00000474684 TAOK2Q9UL54 1235 aa7.33□□□□□ -1.24
CPSF7-210ENST00000474684 ZBED9Q6R2W3 1325 aa7.32□□□□□ -1.24
CPSF7-210ENST00000474684 C2orf72A6NCS6 295 aa7.32□□□□□ -1.24
CPSF7-210ENST00000474684 GNAI2P04899 355 aa7.32□□□□□ -1.24
CPSF7-210ENST00000474684 CTGFP29279 349 aa7.32□□□□□ -1.24
CPSF7-210ENST00000474684 ARID4AP29374 1257 aaPredicted RBP7.32□□□□□ -1.24
CPSF7-210ENST00000474684 RHBDL3P58872 404 aa7.32□□□□□ -1.24
CPSF7-210ENST00000474684 MECOMQ03112 1051 aa7.32□□□□□ -1.24
CPSF7-210ENST00000474684 PPIL2Q13356 520 aa7.32□□□□□ -1.24
CPSF7-210ENST00000474684 PICALMQ13492 652 aa7.32□□□□□ -1.24
CPSF7-210ENST00000474684 DCAF15Q66K64 600 aa7.32□□□□□ -1.24
CPSF7-210ENST00000474684 DIEXFQ68CQ4 756 aaKnown RBP7.32□□□□□ -1.24
CPSF7-210ENST00000474684 ERO1BQ86YB8 467 aa7.32□□□□□ -1.24
CPSF7-210ENST00000474684 GOLGA6L2Q8N9W4 650 aaPredicted RBP7.32□□□□□ -1.24
CPSF7-210ENST00000474684 KCTD12Q96CX2 325 aaKnown RBP7.32□□□□□ -1.24
CPSF7-210ENST00000474684 DBNDD2Q9BQY9 259 aa7.32□□□□□ -1.24
CPSF7-210ENST00000474684 USP40Q9NVE5 1235 aa7.32□□□□□ -1.24
CPSF7-210ENST00000474684 GNL3LQ9NVN8 582 aaKnown RBP7.32□□□□□ -1.24
CPSF7-210ENST00000474684 PTCH2Q9Y6C5 1203 aa7.32□□□□□ -1.24
CPSF7-210ENST00000474684 A0A0G2JMZ2 1700 aa7.32□□□□□ -1.24
CPSF7-210ENST00000474684 MYH4Q9Y623 1939 aa7.31□□□□□ -1.24
CPSF7-210ENST00000474684 GTF2A2P52657 109 aa7.31□□□□□ -1.24
CPSF7-210ENST00000474684 INHBEP58166 350 aa7.31□□□□□ -1.24
CPSF7-210ENST00000474684 SP3Q02447 781 aa7.31□□□□□ -1.24
CPSF7-210ENST00000474684 MVPQ14764 893 aaKnown RBP7.31□□□□□ -1.24
CPSF7-210ENST00000474684 PKN2Q16513 984 aaKnown RBP7.31□□□□□ -1.24
CPSF7-210ENST00000474684 TNNI3KQ59H18 835 aa7.31□□□□□ -1.24
CPSF7-210ENST00000474684 NOL9Q5SY16 702 aaKnown RBP7.31□□□□□ -1.24
CPSF7-210ENST00000474684 ADGRA1Q86SQ6 560 aa7.31□□□□□ -1.24
CPSF7-210ENST00000474684 ITPRIPQ8IWB1 547 aa7.31□□□□□ -1.24
CPSF7-210ENST00000474684 SPATA5Q8NB90 893 aa7.31□□□□□ -1.24
CPSF7-210ENST00000474684 PANK1Q8TE04 598 aa7.31□□□□□ -1.24
CPSF7-210ENST00000474684 SSH3Q8TE77 659 aa7.31□□□□□ -1.24
CPSF7-210ENST00000474684 NSUN4Q96CB9 384 aaKnown RBP7.31□□□□□ -1.24
CPSF7-210ENST00000474684 ERO1AQ96HE7 468 aa7.31□□□□□ -1.24
CPSF7-210ENST00000474684 NEUROD6Q96NK8 337 aa7.31□□□□□ -1.24
CPSF7-210ENST00000474684 IDI2Q9BXS1 227 aa7.31□□□□□ -1.24
CPSF7-210ENST00000474684 SNRKQ9NRH2 765 aa7.31□□□□□ -1.24
CPSF7-210ENST00000474684 ZNF112Q9UJU3 913 aa7.31□□□□□ -1.24
CPSF7-210ENST00000474684 DBNLQ9UJU6 430 aaKnown RBP7.31□□□□□ -1.24
CPSF7-210ENST00000474684 KCNH4Q9UQ05 1017 aa7.31□□□□□ -1.24
CPSF7-210ENST00000474684 PTPN22Q9Y2R2 807 aa7.31□□□□□ -1.24
CPSF7-210ENST00000474684 NDUFB9Q9Y6M9 179 aa7.31□□□□□ -1.24
CPSF7-210ENST00000474684 FPGT-TNNI3KV9GXZ4 949 aa7.31□□□□□ -1.24
CPSF7-210ENST00000474684 GREB1LQ9C091 1923 aaPredicted RBP7.31□□□□□ -1.24
CPSF7-210ENST00000474684 ZNFX1Q9P2E3 1918 aaKnown RBP7.31□□□□□ -1.24
CPSF7-210ENST00000474684 GPR75-ASB3A0A0A6YYF3 556 aa7.3□□□□□ -1.24
CPSF7-210ENST00000474684 PHF20L1A8MW92 1017 aa7.3□□□□□ -1.24
CPSF7-210ENST00000474684 IPO8O15397 1037 aaKnown RBP7.3□□□□□ -1.24
CPSF7-210ENST00000474684 ENTPD3O75355 529 aa7.3□□□□□ -1.24
CPSF7-210ENST00000474684 CETPP11597 493 aa7.3□□□□□ -1.24
CPSF7-210ENST00000474684 PPATQ06203 517 aa7.3□□□□□ -1.24
CPSF7-210ENST00000474684 SNAPC2Q13487 334 aa7.3□□□□□ -1.24
CPSF7-210ENST00000474684 RRP1BQ14684 758 aaKnown RBP7.3□□□□□ -1.24
CPSF7-210ENST00000474684 SHROOM1Q2M3G4 852 aaPredicted RBP7.3□□□□□ -1.24
CPSF7-210ENST00000474684 ERICH6Q7L0X2 663 aa7.3□□□□□ -1.24
CPSF7-210ENST00000474684 ZGPATQ8N5A5 531 aaKnown RBP7.3□□□□□ -1.24
CPSF7-210ENST00000474684 EFCC1Q9HA90 598 aa7.3□□□□□ -1.24
CPSF7-210ENST00000474684 CPA4Q9UI42 421 aa7.3□□□□□ -1.24
CPSF7-210ENST00000474684 AKAP2Q9Y2D5 859 aa7.3□□□□□ -1.24
CPSF7-210ENST00000474684 PLXNA1Q9UIW2 1896 aa7.3□□□□□ -1.24
CPSF7-210ENST00000474684 TLR2O60603 784 aa7.29□□□□□ -1.24
CPSF7-210ENST00000474684 MYCP01106 439 aaPredicted RBP7.29□□□□□ -1.24
CPSF7-210ENST00000474684 CYP2C8P10632 490 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms