RNA–Protein interactions for RNA: ENST00000474344.1

VANGL1-205, Transcript of VANGL planar cell polarity protein 1, humanhuman

TSL 2

Gene VANGL1, Length 461 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VANGL1-205ENST00000474344 EVX2Q03828 476 aa12.52□□□□□ -0.41
VANGL1-205ENST00000474344 RRP1BQ14684 758 aaKnown RBP12.52□□□□□ -0.41
VANGL1-205ENST00000474344 MCMDC2Q4G0Z9 681 aa12.52□□□□□ -0.41
VANGL1-205ENST00000474344 SBK1Q52WX2 424 aa12.52□□□□□ -0.41
VANGL1-205ENST00000474344 BMP2KLQ5H9B9 411 aa12.52□□□□□ -0.41
VANGL1-205ENST00000474344 RGMBQ6NW40 437 aa12.52□□□□□ -0.41
VANGL1-205ENST00000474344 CCDC129Q6ZRS4 1044 aa12.52□□□□□ -0.41
VANGL1-205ENST00000474344 ZNF589Q86UQ0 364 aaPredicted RBP12.52□□□□□ -0.41
VANGL1-205ENST00000474344 FOXP4Q8IVH2 680 aaPredicted RBP12.52□□□□□ -0.41
VANGL1-205ENST00000474344 ZSCAN29Q8IWY8 852 aaPredicted RBP12.52□□□□□ -0.41
VANGL1-205ENST00000474344 CLMNQ96JQ2 1002 aa12.52□□□□□ -0.41
VANGL1-205ENST00000474344 ZNF341Q9BYN7 854 aa12.52□□□□□ -0.41
VANGL1-205ENST00000474344 EHD4Q9H223 541 aa12.52□□□□□ -0.41
VANGL1-205ENST00000474344 IL25Q9H293 177 aa12.52□□□□□ -0.41
VANGL1-205ENST00000474344 SAP30BPQ9UHR5 308 aaKnown RBP12.52□□□□□ -0.41
VANGL1-205ENST00000474344 HERC5Q9UII4 1024 aaKnown RBP12.52□□□□□ -0.41
VANGL1-205ENST00000474344 SLC4A4Q9Y6R1 1079 aa12.52□□□□□ -0.41
VANGL1-205ENST00000474344 MYH4Q9Y623 1939 aa12.51□□□□□ -0.41
VANGL1-205ENST00000474344 SLC10A3P09131 477 aa12.51□□□□□ -0.41
VANGL1-205ENST00000474344 CHMLP26374 656 aa12.51□□□□□ -0.41
VANGL1-205ENST00000474344 TTLL12Q14166 644 aaPredicted RBP12.51□□□□□ -0.41
VANGL1-205ENST00000474344 ALX1Q15699 326 aa12.51□□□□□ -0.41
VANGL1-205ENST00000474344 NOL9Q5SY16 702 aaKnown RBP12.51□□□□□ -0.41
VANGL1-205ENST00000474344 C12orf60Q5U649 245 aa12.51□□□□□ -0.41
VANGL1-205ENST00000474344 CYP4F22Q6NT55 531 aa12.51□□□□□ -0.41
VANGL1-205ENST00000474344 CTR9Q6PD62 1173 aa12.51□□□□□ -0.41
VANGL1-205ENST00000474344 RASAL3Q86YV0 1011 aa12.51□□□□□ -0.41
VANGL1-205ENST00000474344 ANKRD13AQ8IZ07 590 aa12.51□□□□□ -0.41
VANGL1-205ENST00000474344 ZKSCAN4Q969J2 545 aaPredicted RBP12.51□□□□□ -0.41
VANGL1-205ENST00000474344 CAPNS2Q96L46 248 aa12.51□□□□□ -0.41
VANGL1-205ENST00000474344 SNCAIPQ9Y6H5 919 aa12.51□□□□□ -0.41
VANGL1-205ENST00000474344 FAM196BA6NMK8 535 aa12.5□□□□□ -0.41
VANGL1-205ENST00000474344 USP17L12C9JPN9 530 aa12.5□□□□□ -0.41
VANGL1-205ENST00000474344 USP17L21D6R901 530 aa12.5□□□□□ -0.41
VANGL1-205ENST00000474344 HIP1O00291 1037 aa12.5□□□□□ -0.41
VANGL1-205ENST00000474344 CYP2D6P10635 497 aa12.5□□□□□ -0.41
VANGL1-205ENST00000474344 GJA5P36382 358 aa12.5□□□□□ -0.41
VANGL1-205ENST00000474344 ZNF157P51786 506 aaPredicted RBP12.5□□□□□ -0.41
VANGL1-205ENST00000474344 VGLL4Q14135 290 aa12.5□□□□□ -0.41
VANGL1-205ENST00000474344 VPS53Q5VIR6 699 aa12.5□□□□□ -0.41
VANGL1-205ENST00000474344 TATDN1Q6P1N9 297 aa12.5□□□□□ -0.41
VANGL1-205ENST00000474344 TTC6Q86TZ1 520 aa12.5□□□□□ -0.41
VANGL1-205ENST00000474344 IFNL3Q8IZI9 196 aa12.5□□□□□ -0.41
VANGL1-205ENST00000474344 JMYQ8N9B5 988 aa12.5□□□□□ -0.41
VANGL1-205ENST00000474344 CCDC102AQ96A19 550 aa12.5□□□□□ -0.41
VANGL1-205ENST00000474344 WRNIP1Q96S55 665 aa12.5□□□□□ -0.41
VANGL1-205ENST00000474344 ZIC5Q96T25 663 aa12.5□□□□□ -0.41
VANGL1-205ENST00000474344 MCM9Q9NXL9 1143 aa12.5□□□□□ -0.41
VANGL1-205ENST00000474344 TAOK2Q9UL54 1235 aa12.5□□□□□ -0.41
VANGL1-205ENST00000474344 WDR33Q9C0J8 1336 aaKnown RBP12.5□□□□□ -0.41
VANGL1-205ENST00000474344 CCDC171Q6TFL3 1326 aa12.49□□□□□ -0.41
VANGL1-205ENST00000474344 CYP2D7A0A087X1C5 515 aa12.49□□□□□ -0.41
VANGL1-205ENST00000474344 CTNND1O60716 968 aaKnown RBP12.49□□□□□ -0.41
VANGL1-205ENST00000474344 SHMT1P34896 483 aa12.49□□□□□ -0.41
VANGL1-205ENST00000474344 JAG1P78504 1218 aa12.49□□□□□ -0.41
VANGL1-205ENST00000474344 SPRYD7Q5W111 196 aa12.49□□□□□ -0.41
VANGL1-205ENST00000474344 CWC27Q6UX04 472 aaKnown RBP12.49□□□□□ -0.41
VANGL1-205ENST00000474344 SLC10A4Q96EP9 437 aa12.49□□□□□ -0.41
VANGL1-205ENST00000474344 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.49□□□□□ -0.41
VANGL1-205ENST00000474344 SERPINB13Q9UIV8 391 aa12.49□□□□□ -0.41
VANGL1-205ENST00000474344 ROBO3Q96MS0 1386 aa12.48□□□□□ -0.41
VANGL1-205ENST00000474344 ZMYM6O95789 1325 aa12.48□□□□□ -0.41
VANGL1-205ENST00000474344 SPDYE5A6NIY4 337 aa12.48□□□□□ -0.41
VANGL1-205ENST00000474344 POLR3DP05423 398 aaPredicted RBP12.48□□□□□ -0.41
VANGL1-205ENST00000474344 HLA-DOAP06340 250 aa12.48□□□□□ -0.41
VANGL1-205ENST00000474344 HSPD1P10809 573 aaKnown RBP12.48□□□□□ -0.41
VANGL1-205ENST00000474344 MAP2K2P36507 400 aa12.48□□□□□ -0.41
VANGL1-205ENST00000474344 CAP2P40123 477 aa12.48□□□□□ -0.41
VANGL1-205ENST00000474344 ECE1P42892 770 aa12.48□□□□□ -0.41
VANGL1-205ENST00000474344 CNKSR2Q8WXI2 1034 aa12.48□□□□□ -0.41
VANGL1-205ENST00000474344 WNK4Q96J92 1243 aa12.48□□□□□ -0.41
VANGL1-205ENST00000474344 DIAPH3Q9NSV4 1193 aa12.48□□□□□ -0.41
VANGL1-205ENST00000474344 LOC285556D6RIA3 1793 aa12.48□□□□□ -0.41
VANGL1-205ENST00000474344 AOC2O75106 756 aa12.47□□□□□ -0.41
VANGL1-205ENST00000474344 FGAP02671 866 aa12.47□□□□□ -0.41
VANGL1-205ENST00000474344 ZBTB48P10074 688 aaPredicted RBP12.47□□□□□ -0.41
VANGL1-205ENST00000474344 NOGQ13253 232 aa12.47□□□□□ -0.41
VANGL1-205ENST00000474344 SHROOM1Q2M3G4 852 aaPredicted RBP12.47□□□□□ -0.41
VANGL1-205ENST00000474344 SLC4A8Q2Y0W8 1093 aa12.47□□□□□ -0.41
VANGL1-205ENST00000474344 C16orf86Q6ZW13 317 aa12.47□□□□□ -0.41
VANGL1-205ENST00000474344 ERO1BQ86YB8 467 aa12.47□□□□□ -0.41
VANGL1-205ENST00000474344 SCYL3Q8IZE3 742 aa12.47□□□□□ -0.41
VANGL1-205ENST00000474344 DYNLL2Q96FJ2 89 aa12.47□□□□□ -0.41
VANGL1-205ENST00000474344 ELP3Q9H9T3 547 aa12.47□□□□□ -0.41
VANGL1-205ENST00000474344 ARPP21Q9UBL0 812 aaPredicted RBP12.47□□□□□ -0.41
VANGL1-205ENST00000474344 CSADQ9Y600 493 aa12.47□□□□□ -0.41
VANGL1-205ENST00000474344 DOCK3Q8IZD9 2030 aa12.47□□□□□ -0.41
VANGL1-205ENST00000474344 PARP14Q460N5 1801 aa12.46□□□□□ -0.41
VANGL1-205ENST00000474344 RAD50Q92878 1312 aa12.46□□□□□ -0.41
VANGL1-205ENST00000474344 SGSM2O43147 1006 aa12.46□□□□□ -0.41
VANGL1-205ENST00000474344 PTPRAP18433 802 aa12.46□□□□□ -0.41
VANGL1-205ENST00000474344 MFAP1P55081 439 aaKnown RBP12.46□□□□□ -0.41
VANGL1-205ENST00000474344 SLC44A5Q8NCS7 719 aa12.46□□□□□ -0.41
VANGL1-205ENST00000474344 MS4A4AQ96JQ5 239 aa12.46□□□□□ -0.41
VANGL1-205ENST00000474344 GINM1Q9NU53 330 aa12.46□□□□□ -0.41
VANGL1-205ENST00000474344 ANAPC4Q9UJX5 808 aa12.46□□□□□ -0.41
VANGL1-205ENST00000474344 KCNH4Q9UQ05 1017 aa12.46□□□□□ -0.41
VANGL1-205ENST00000474344 TACC3Q9Y6A5 838 aa12.46□□□□□ -0.41
VANGL1-205ENST00000474344 CASP8AP2Q9UKL3 1982 aa12.46□□□□□ -0.41
VANGL1-205ENST00000474344 RLFQ13129 1914 aa12.46□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms