RNA–Protein interactions for RNA: ENST00000474193.1

CCDC171-206, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 363 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-206ENST00000474193 HLA-DOAP06340 250 aa22.58■■□□□ 1.21
CCDC171-206ENST00000474193 PTPRAP18433 802 aa22.58■■□□□ 1.21
CCDC171-206ENST00000474193 ANKRD23Q86SG2 305 aa22.58■■□□□ 1.21
CCDC171-206ENST00000474193 EFCC1Q9HA90 598 aa22.58■■□□□ 1.21
CCDC171-206ENST00000474193 TLR2O60603 784 aa22.57■■□□□ 1.2
CCDC171-206ENST00000474193 MIGA1Q8NAN2 632 aa22.57■■□□□ 1.2
CCDC171-206ENST00000474193 TBC1D2Q9BYX2 928 aa22.57■■□□□ 1.2
CCDC171-206ENST00000474193 ANTXR1Q9H6X2 564 aa22.57■■□□□ 1.2
CCDC171-206ENST00000474193 NDUFB9Q9Y6M9 179 aa22.57■■□□□ 1.2
CCDC171-206ENST00000474193 MAST2Q6P0Q8 1798 aa22.57■■□□□ 1.2
CCDC171-206ENST00000474193 PDHXO00330 501 aa22.56■■□□□ 1.2
CCDC171-206ENST00000474193 GOLIM4O00461 696 aa22.56■■□□□ 1.2
CCDC171-206ENST00000474193 SLC9C2Q5TAH2 1124 aa22.56■■□□□ 1.2
CCDC171-206ENST00000474193 ADGRA1Q86SQ6 560 aa22.56■■□□□ 1.2
CCDC171-206ENST00000474193 CD99L2Q8TCZ2 262 aa22.56■■□□□ 1.2
CCDC171-206ENST00000474193 HPS5Q9UPZ3 1129 aa22.56■■□□□ 1.2
CCDC171-206ENST00000474193 ATP5JP18859 108 aa22.55■■□□□ 1.2
CCDC171-206ENST00000474193 DYNLL1P63167 89 aaKnown RBP22.55■■□□□ 1.2
CCDC171-206ENST00000474193 HDAC1Q13547 482 aaPredicted RBP22.55■■□□□ 1.2
CCDC171-206ENST00000474193 GPATCH3Q96I76 525 aa22.55■■□□□ 1.2
CCDC171-206ENST00000474193 DDX24Q9GZR7 859 aaKnown RBP eCLIP22.55■■□□□ 1.2
CCDC171-206ENST00000474193 ZBTB47Q9UFB7 747 aaPredicted RBP22.55■■□□□ 1.2
CCDC171-206ENST00000474193 AFG3L2Q9Y4W6 797 aa22.55■■□□□ 1.2
CCDC171-206ENST00000474193 FLT1P17948 1338 aa22.55■■□□□ 1.2
CCDC171-206ENST00000474193 CAP2P40123 477 aa22.54■■□□□ 1.2
CCDC171-206ENST00000474193 GADL1Q6ZQY3 521 aa22.54■■□□□ 1.2
CCDC171-206ENST00000474193 OTOP1Q7RTM1 612 aa22.54■■□□□ 1.2
CCDC171-206ENST00000474193 PARK7Q99497 189 aaKnown RBP22.54■■□□□ 1.2
CCDC171-206ENST00000474193 BOLA2Q9H3K6 86 aa22.54■■□□□ 1.2
CCDC171-206ENST00000474193 AS3MTQ9HBK9 375 aa22.54■■□□□ 1.2
CCDC171-206ENST00000474193 PAG1Q9NWQ8 432 aa22.54■■□□□ 1.2
CCDC171-206ENST00000474193 PALD1Q9ULE6 856 aa22.54■■□□□ 1.2
CCDC171-206ENST00000474193 MAGEB6P1A0A0J9YX57 407 aa22.53■■□□□ 1.2
CCDC171-206ENST00000474193 FAM196BA6NMK8 535 aa22.53■■□□□ 1.2
CCDC171-206ENST00000474193 TTC6Q86TZ1 520 aa22.53■■□□□ 1.2
CCDC171-206ENST00000474193 DCTPP1Q9H773 170 aa22.53■■□□□ 1.2
CCDC171-206ENST00000474193 MYO5AQ9Y4I1 1855 aaKnown RBP22.53■■□□□ 1.2
CCDC171-206ENST00000474193 A0A0G2JLL6 359 aaPredicted RBP22.52■■□□□ 1.2
CCDC171-206ENST00000474193 TRIM75PA6NK02 468 aa22.52■■□□□ 1.2
CCDC171-206ENST00000474193 USP17L5A8MUK1 530 aa22.52■■□□□ 1.2
CCDC171-206ENST00000474193 ZSCAN25Q6NSZ9 544 aa22.52■■□□□ 1.2
CCDC171-206ENST00000474193 PRRT2Q7Z6L0 340 aaPredicted RBP22.52■■□□□ 1.2
CCDC171-206ENST00000474193 CRNKL1Q9BZJ0 848 aaKnown RBP22.52■■□□□ 1.2
CCDC171-206ENST00000474193 GINM1Q9NU53 330 aa22.52■■□□□ 1.2
CCDC171-206ENST00000474193 SAP30BPQ9UHR5 308 aaKnown RBP22.52■■□□□ 1.2
CCDC171-206ENST00000474193 ASNSP08243 561 aa22.51■■□□□ 1.19
CCDC171-206ENST00000474193 PDE6AP16499 860 aa22.51■■□□□ 1.19
CCDC171-206ENST00000474193 MLLT1Q03111 559 aaPredicted RBP22.51■■□□□ 1.19
CCDC171-206ENST00000474193 GCC1Q96CN9 775 aa22.51■■□□□ 1.19
CCDC171-206ENST00000474193 SMARCA5O60264 1052 aaPredicted RBP22.5■■□□□ 1.19
CCDC171-206ENST00000474193 GNRH1P01148 92 aa22.5■■□□□ 1.19
CCDC171-206ENST00000474193 SLURP2P0DP57 97 aa22.5■■□□□ 1.19
CCDC171-206ENST00000474193 PABPC4Q13310 644 aaKnown RBP eCLIP22.5■■□□□ 1.19
CCDC171-206ENST00000474193 ERICH6BQ5W0A0 696 aa22.5■■□□□ 1.19
CCDC171-206ENST00000474193 ZNF280CQ8ND82 737 aa22.5■■□□□ 1.19
CCDC171-206ENST00000474193 HAUS7Q99871 368 aa22.5■■□□□ 1.19
CCDC171-206ENST00000474193 PTPN22Q9Y2R2 807 aa22.5■■□□□ 1.19
CCDC171-206ENST00000474193 SLC45A1Q9Y2W3 748 aa22.5■■□□□ 1.19
CCDC171-206ENST00000474193 POLR3DP05423 398 aaPredicted RBP22.49■■□□□ 1.19
CCDC171-206ENST00000474193 HOXD10P28358 340 aa22.49■■□□□ 1.19
CCDC171-206ENST00000474193 RGS19P49795 217 aa22.49■■□□□ 1.19
CCDC171-206ENST00000474193 SPP2Q13103 211 aa22.49■■□□□ 1.19
CCDC171-206ENST00000474193 ECHDC1Q9NTX5 307 aa22.49■■□□□ 1.19
CCDC171-206ENST00000474193 ZNF532Q9HCE3 1301 aa22.49■■□□□ 1.19
CCDC171-206ENST00000474193 DOCK1Q14185 1865 aa22.49■■□□□ 1.19
CCDC171-206ENST00000474193 LACTBP83111 547 aaPredicted RBP22.48■■□□□ 1.19
CCDC171-206ENST00000474193 C17orf99Q6UX52 265 aa22.48■■□□□ 1.19
CCDC171-206ENST00000474193 NBPF11Q86T75 865 aa22.48■■□□□ 1.19
CCDC171-206ENST00000474193 METTL16Q86W50 562 aaKnown RBP22.48■■□□□ 1.19
CCDC171-206ENST00000474193 CPA4Q9UI42 421 aa22.48■■□□□ 1.19
CCDC171-206ENST00000474193 SERPINB13Q9UIV8 391 aa22.48■■□□□ 1.19
CCDC171-206ENST00000474193 PNMA3Q9UL41 463 aa22.48■■□□□ 1.19
CCDC171-206ENST00000474193 PRMT2P55345 433 aa22.47■■□□□ 1.19
CCDC171-206ENST00000474193 MOGSQ13724 837 aa22.47■■□□□ 1.19
CCDC171-206ENST00000474193 GPAT2Q6NUI2 795 aa22.47■■□□□ 1.19
CCDC171-206ENST00000474193 PROCA1Q8NCQ7 364 aaPredicted RBP22.47■■□□□ 1.19
CCDC171-206ENST00000474193 SMCR8Q8TEV9 937 aaPredicted RBP22.47■■□□□ 1.19
CCDC171-206ENST00000474193 DDRGK1Q96HY6 314 aa22.47■■□□□ 1.19
CCDC171-206ENST00000474193 SOX10P56693 466 aa22.46■■□□□ 1.19
CCDC171-206ENST00000474193 SLC4A8Q2Y0W8 1093 aa22.46■■□□□ 1.19
CCDC171-206ENST00000474193 AMOTL1Q8IY63 956 aa22.46■■□□□ 1.19
CCDC171-206ENST00000474193 RIOK1Q9BRS2 568 aaKnown RBP22.46■■□□□ 1.19
CCDC171-206ENST00000474193 TMOD4Q9NZQ9 345 aa22.46■■□□□ 1.19
CCDC171-206ENST00000474193 AGTPBP1Q9UPW5 1226 aa22.46■■□□□ 1.19
CCDC171-206ENST00000474193 FMNL1O95466 1100 aaPredicted RBP22.45■■□□□ 1.18
CCDC171-206ENST00000474193 IGHDP01880 384 aa22.45■■□□□ 1.18
CCDC171-206ENST00000474193 OSBPP22059 807 aa22.45■■□□□ 1.18
CCDC171-206ENST00000474193 LRRFIP1Q32MZ4 808 aaKnown RBP22.45■■□□□ 1.18
CCDC171-206ENST00000474193 CCDC84Q86UT8 332 aaPredicted RBP22.45■■□□□ 1.18
CCDC171-206ENST00000474193 EDC3Q96F86 508 aaKnown RBP22.45■■□□□ 1.18
CCDC171-206ENST00000474193 WDR18Q9BV38 432 aa22.45■■□□□ 1.18
CCDC171-206ENST00000474193 EHD4Q9H223 541 aa22.45■■□□□ 1.18
CCDC171-206ENST00000474193 CABP5Q9NP86 173 aa22.45■■□□□ 1.18
CCDC171-206ENST00000474193 MCM9Q9NXL9 1143 aa22.45■■□□□ 1.18
CCDC171-206ENST00000474193 C19orf81C9J6K1 198 aa22.44■■□□□ 1.18
CCDC171-206ENST00000474193 CYP2C8P10632 490 aa22.44■■□□□ 1.18
CCDC171-206ENST00000474193 MYH1P12882 1939 aa22.44■■□□□ 1.18
CCDC171-206ENST00000474193 ADD2P35612 726 aa22.44■■□□□ 1.18
CCDC171-206ENST00000474193 ANKRD45Q5TZF3 282 aa22.44■■□□□ 1.18
CCDC171-206ENST00000474193 FOCADQ5VW36 1801 aa22.44■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms