RNA–Protein interactions for RNA: ENST00000474178.1

RAB3GAP2-204, Transcript of RAB3 GTPase activating non-catalytic protein subunit 2, humanhuman

TSL 4

Gene RAB3GAP2, Length 539 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3GAP2-204ENST00000474178 KIF16BQ96L93 1317 aa12.52□□□□□ -0.41
RAB3GAP2-204ENST00000474178 LAMA2P24043 3122 aaKnown RBP12.52□□□□□ -0.41
RAB3GAP2-204ENST00000474178 PRUNE2Q8WUY3 3088 aa12.51□□□□□ -0.41
RAB3GAP2-204ENST00000474178 SIPA1L1O43166 1804 aa12.51□□□□□ -0.41
RAB3GAP2-204ENST00000474178 RLFQ13129 1914 aa12.51□□□□□ -0.41
RAB3GAP2-204ENST00000474178 CTNND1O60716 968 aaKnown RBP12.51□□□□□ -0.41
RAB3GAP2-204ENST00000474178 ALDH1L1O75891 902 aa12.51□□□□□ -0.41
RAB3GAP2-204ENST00000474178 PRKAR2AP13861 404 aaKnown RBP12.51□□□□□ -0.41
RAB3GAP2-204ENST00000474178 CYP2B6P20813 491 aa12.51□□□□□ -0.41
RAB3GAP2-204ENST00000474178 CCND3P30281 292 aaPredicted RBP12.51□□□□□ -0.41
RAB3GAP2-204ENST00000474178 EXOSC9Q06265 439 aaKnown RBP12.51□□□□□ -0.41
RAB3GAP2-204ENST00000474178 MAFAQ8NHW3 353 aaPredicted RBP12.51□□□□□ -0.41
RAB3GAP2-204ENST00000474178 WDR66Q8TBY9 1149 aa12.51□□□□□ -0.41
RAB3GAP2-204ENST00000474178 PRKRIP1Q9H875 184 aaPredicted RBP12.51□□□□□ -0.41
RAB3GAP2-204ENST00000474178 IL16Q14005 1332 aa12.51□□□□□ -0.41
RAB3GAP2-204ENST00000474178 FAM196BA6NMK8 535 aa12.5□□□□□ -0.41
RAB3GAP2-204ENST00000474178 ENTPD3O75355 529 aa12.5□□□□□ -0.41
RAB3GAP2-204ENST00000474178 CACNB2Q08289 660 aaPredicted RBP12.5□□□□□ -0.41
RAB3GAP2-204ENST00000474178 RRP1BQ14684 758 aaKnown RBP12.5□□□□□ -0.41
RAB3GAP2-204ENST00000474178 PUM3Q15397 648 aaKnown RBP12.5□□□□□ -0.41
RAB3GAP2-204ENST00000474178 ZNF697Q5TEC3 545 aa12.5□□□□□ -0.41
RAB3GAP2-204ENST00000474178 SLC4A10Q6U841 1118 aa12.5□□□□□ -0.41
RAB3GAP2-204ENST00000474178 PROCA1Q8NCQ7 364 aaPredicted RBP12.5□□□□□ -0.41
RAB3GAP2-204ENST00000474178 ASCC2Q9H1I8 757 aaPredicted RBP12.5□□□□□ -0.41
RAB3GAP2-204ENST00000474178 LRRFIP2Q9Y608 721 aaKnown RBP12.5□□□□□ -0.41
RAB3GAP2-204ENST00000474178 MUC3AQ02505 3323 aa12.49□□□□□ -0.41
RAB3GAP2-204ENST00000474178 GAKO14976 1311 aa12.49□□□□□ -0.41
RAB3GAP2-204ENST00000474178 IFIT1P09914 478 aaKnown RBP12.49□□□□□ -0.41
RAB3GAP2-204ENST00000474178 COL9A1P20849 921 aa12.49□□□□□ -0.41
RAB3GAP2-204ENST00000474178 SPP2Q13103 211 aa12.49□□□□□ -0.41
RAB3GAP2-204ENST00000474178 CCL14Q16627 93 aa12.49□□□□□ -0.41
RAB3GAP2-204ENST00000474178 CCDC184Q52MB2 194 aa12.49□□□□□ -0.41
RAB3GAP2-204ENST00000474178 MYLIPQ8WY64 445 aa12.49□□□□□ -0.41
RAB3GAP2-204ENST00000474178 SRCIN1Q9C0H9 1055 aa12.49□□□□□ -0.41
RAB3GAP2-204ENST00000474178 TTYH1Q9H313 450 aaPredicted RBP12.49□□□□□ -0.41
RAB3GAP2-204ENST00000474178 SEMA6BQ9H3T3 888 aa12.49□□□□□ -0.41
RAB3GAP2-204ENST00000474178 TXNRD2Q9NNW7 524 aa12.49□□□□□ -0.41
RAB3GAP2-204ENST00000474178 MORF4L1Q9UBU8 362 aa12.49□□□□□ -0.41
RAB3GAP2-204ENST00000474178 PNMA3Q9UL41 463 aa12.49□□□□□ -0.41
RAB3GAP2-204ENST00000474178 LDHBP07195 334 aaKnown RBP12.48□□□□□ -0.41
RAB3GAP2-204ENST00000474178 RFX5P48382 616 aaPredicted RBP12.48□□□□□ -0.41
RAB3GAP2-204ENST00000474178 GCLCP48506 637 aaPredicted RBP12.48□□□□□ -0.41
RAB3GAP2-204ENST00000474178 HMGCS2P54868 508 aa12.48□□□□□ -0.41
RAB3GAP2-204ENST00000474178 POTEEQ6S8J3 1075 aa12.48□□□□□ -0.41
RAB3GAP2-204ENST00000474178 ZSCAN29Q8IWY8 852 aaPredicted RBP12.48□□□□□ -0.41
RAB3GAP2-204ENST00000474178 USP6NLQ92738 828 aa12.48□□□□□ -0.41
RAB3GAP2-204ENST00000474178 SALL1Q9NSC2 1324 aa12.47□□□□□ -0.41
RAB3GAP2-204ENST00000474178 SLC5A1P13866 664 aa12.47□□□□□ -0.41
RAB3GAP2-204ENST00000474178 PICALMQ13492 652 aa12.47□□□□□ -0.41
RAB3GAP2-204ENST00000474178 SHHQ15465 462 aa12.47□□□□□ -0.41
RAB3GAP2-204ENST00000474178 C9orf50Q5SZB4 431 aa12.47□□□□□ -0.41
RAB3GAP2-204ENST00000474178 LPIN2Q92539 896 aa12.47□□□□□ -0.41
RAB3GAP2-204ENST00000474178 CDK5RAP2Q96SN8 1893 aa12.46□□□□□ -0.41
RAB3GAP2-204ENST00000474178 XRCC5P13010 732 aaKnown RBP12.46□□□□□ -0.41
RAB3GAP2-204ENST00000474178 Q3C1V9 767 aa12.46□□□□□ -0.41
RAB3GAP2-204ENST00000474178 SH3D19Q5HYK7 790 aa12.46□□□□□ -0.41
RAB3GAP2-204ENST00000474178 ATG9AQ7Z3C6 839 aa12.46□□□□□ -0.41
RAB3GAP2-204ENST00000474178 ZNF280CQ8ND82 737 aa12.46□□□□□ -0.41
RAB3GAP2-204ENST00000474178 SENP6Q9GZR1 1112 aaPredicted RBP12.46□□□□□ -0.41
RAB3GAP2-204ENST00000474178 DNAH12Q6ZR08 3092 aa12.46□□□□□ -0.41
RAB3GAP2-204ENST00000474178 EYA2O00167 538 aa12.45□□□□□ -0.42
RAB3GAP2-204ENST00000474178 TBC1D12O60347 775 aa12.45□□□□□ -0.42
RAB3GAP2-204ENST00000474178 ZKSCAN1P17029 563 aaPredicted RBP12.45□□□□□ -0.42
RAB3GAP2-204ENST00000474178 PHKA1P46020 1223 aa12.45□□□□□ -0.42
RAB3GAP2-204ENST00000474178 VASPP50552 380 aaPredicted RBP12.45□□□□□ -0.42
RAB3GAP2-204ENST00000474178 ATN1P54259 1190 aaPredicted RBP12.45□□□□□ -0.42
RAB3GAP2-204ENST00000474178 RHBDL3P58872 404 aa12.45□□□□□ -0.42
RAB3GAP2-204ENST00000474178 USP38Q8NB14 1042 aa12.45□□□□□ -0.42
RAB3GAP2-204ENST00000474178 ZNF384Q8TF68 577 aa12.45□□□□□ -0.42
RAB3GAP2-204ENST00000474178 P2RX7Q99572 595 aaKnown RBP12.45□□□□□ -0.42
RAB3GAP2-204ENST00000474178 NUDT12Q9BQG2 462 aa12.45□□□□□ -0.42
RAB3GAP2-204ENST00000474178 PORCNQ9H237 461 aa12.45□□□□□ -0.42
RAB3GAP2-204ENST00000474178 BTDP43251 543 aa12.44□□□□□ -0.42
RAB3GAP2-204ENST00000474178 JAG1P78504 1218 aa12.44□□□□□ -0.42
RAB3GAP2-204ENST00000474178 MORN1Q5T089 497 aa12.44□□□□□ -0.42
RAB3GAP2-204ENST00000474178 LBHD1Q9BQE6 289 aaPredicted RBP12.44□□□□□ -0.42
RAB3GAP2-204ENST00000474178 OSBPL5Q9H0X9 879 aaPredicted RBP12.44□□□□□ -0.42
RAB3GAP2-204ENST00000474178 FLRT1Q9NZU1 646 aa12.44□□□□□ -0.42
RAB3GAP2-204ENST00000474178 RBPJLQ9UBG7 517 aa12.44□□□□□ -0.42
RAB3GAP2-204ENST00000474178 ADORA1P30542 326 aa12.43□□□□□ -0.42
RAB3GAP2-204ENST00000474178 CAP2P40123 477 aa12.43□□□□□ -0.42
RAB3GAP2-204ENST00000474178 RTP1P59025 263 aa12.43□□□□□ -0.42
RAB3GAP2-204ENST00000474178 SHROOM1Q2M3G4 852 aaPredicted RBP12.43□□□□□ -0.42
RAB3GAP2-204ENST00000474178 GPR142Q7Z601 462 aa12.43□□□□□ -0.42
RAB3GAP2-204ENST00000474178 SOCS4Q8WXH5 440 aa12.43□□□□□ -0.42
RAB3GAP2-204ENST00000474178 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.43□□□□□ -0.42
RAB3GAP2-204ENST00000474178 FOCADQ5VW36 1801 aa12.42□□□□□ -0.42
RAB3GAP2-204ENST00000474178 FOSL2P15408 326 aa12.42□□□□□ -0.42
RAB3GAP2-204ENST00000474178 HOXA7P31268 230 aaPredicted RBP12.42□□□□□ -0.42
RAB3GAP2-204ENST00000474178 HERVK_113P62684 666 aa12.42□□□□□ -0.42
RAB3GAP2-204ENST00000474178 PABPC4Q13310 644 aaKnown RBP eCLIP12.42□□□□□ -0.42
RAB3GAP2-204ENST00000474178 MTMR2Q13614 643 aa12.42□□□□□ -0.42
RAB3GAP2-204ENST00000474178 GPRC5AQ8NFJ5 357 aa12.42□□□□□ -0.42
RAB3GAP2-204ENST00000474178 SYMPKQ92797 1274 aaKnown RBP12.42□□□□□ -0.42
RAB3GAP2-204ENST00000474178 FAM163AQ96GL9 167 aaPredicted RBP12.42□□□□□ -0.42
RAB3GAP2-204ENST00000474178 USP44Q9H0E7 712 aa12.42□□□□□ -0.42
RAB3GAP2-204ENST00000474178 DENND2AQ9ULE3 1009 aa12.42□□□□□ -0.42
RAB3GAP2-204ENST00000474178 SALL2Q9Y467 1007 aaPredicted RBP12.42□□□□□ -0.42
RAB3GAP2-204ENST00000474178 MROH7-TTC4A0A0A0MT08 1334 aa12.41□□□□□ -0.42
RAB3GAP2-204ENST00000474178 USP17L5A8MUK1 530 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms