RNA–Protein interactions for RNA: ENST00000473782.1

HPS4-210, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-210ENST00000473782 LPIN2Q92539 896 aa20.32■□□□□ 0.84
HPS4-210ENST00000473782 CDX2Q99626 313 aaPredicted RBP20.32■□□□□ 0.84
HPS4-210ENST00000473782 MORF4L1Q9UBU8 362 aa20.32■□□□□ 0.84
HPS4-210ENST00000473782 CACNB2Q08289 660 aaPredicted RBP20.31■□□□□ 0.84
HPS4-210ENST00000473782 SPP2Q13103 211 aa20.31■□□□□ 0.84
HPS4-210ENST00000473782 ATG9AQ7Z3C6 839 aa20.31■□□□□ 0.84
HPS4-210ENST00000473782 USP6NLQ92738 828 aa20.31■□□□□ 0.84
HPS4-210ENST00000473782 LOC285556D6RIA3 1793 aa20.31■□□□□ 0.84
HPS4-210ENST00000473782 TBC1D12O60347 775 aa20.3■□□□□ 0.84
HPS4-210ENST00000473782 SLC5A1P13866 664 aa20.3■□□□□ 0.84
HPS4-210ENST00000473782 CCND3P30281 292 aaPredicted RBP20.3■□□□□ 0.84
HPS4-210ENST00000473782 HMGCS2P54868 508 aa20.3■□□□□ 0.84
HPS4-210ENST00000473782 TXNRD2Q9NNW7 524 aa20.3■□□□□ 0.84
HPS4-210ENST00000473782 FAM196BA6NMK8 535 aa20.29■□□□□ 0.84
HPS4-210ENST00000473782 EYA2O00167 538 aa20.29■□□□□ 0.84
HPS4-210ENST00000473782 XRCC5P13010 732 aaKnown RBP20.29■□□□□ 0.84
HPS4-210ENST00000473782 ZEB1P37275 1124 aaPredicted RBP20.29■□□□□ 0.84
HPS4-210ENST00000473782 POTEEQ6S8J3 1075 aa20.29■□□□□ 0.84
HPS4-210ENST00000473782 ZSCAN29Q8IWY8 852 aaPredicted RBP20.29■□□□□ 0.84
HPS4-210ENST00000473782 SEMA6BQ9H3T3 888 aa20.29■□□□□ 0.84
HPS4-210ENST00000473782 MYH13Q9UKX3 1938 aa20.29■□□□□ 0.84
HPS4-210ENST00000473782 CCL14Q16627 93 aa20.28■□□□□ 0.84
HPS4-210ENST00000473782 SH3D19Q5HYK7 790 aa20.28■□□□□ 0.84
HPS4-210ENST00000473782 ZNF697Q5TEC3 545 aa20.28■□□□□ 0.84
HPS4-210ENST00000473782 ZNF280CQ8ND82 737 aa20.28■□□□□ 0.84
HPS4-210ENST00000473782 MAFAQ8NHW3 353 aaPredicted RBP20.28■□□□□ 0.84
HPS4-210ENST00000473782 FAM163AQ96GL9 167 aaPredicted RBP20.28■□□□□ 0.84
HPS4-210ENST00000473782 ZBTB22O15209 634 aa20.27■□□□□ 0.84
HPS4-210ENST00000473782 PHKA1P46020 1223 aa20.27■□□□□ 0.84
HPS4-210ENST00000473782 RHBDL3P58872 404 aa20.27■□□□□ 0.84
HPS4-210ENST00000473782 WDR63Q8IWG1 891 aa20.27■□□□□ 0.84
HPS4-210ENST00000473782 PICALMQ13492 652 aa20.26■□□□□ 0.83
HPS4-210ENST00000473782 Q3C1V9 767 aa20.26■□□□□ 0.83
HPS4-210ENST00000473782 ZNF384Q8TF68 577 aa20.26■□□□□ 0.83
HPS4-210ENST00000473782 P2RX7Q99572 595 aaKnown RBP20.26■□□□□ 0.83
HPS4-210ENST00000473782 USP44Q9H0E7 712 aa20.26■□□□□ 0.83
HPS4-210ENST00000473782 OSBPL5Q9H0X9 879 aaPredicted RBP20.26■□□□□ 0.83
HPS4-210ENST00000473782 TTYH1Q9H313 450 aaPredicted RBP20.26■□□□□ 0.83
HPS4-210ENST00000473782 MYH2Q9UKX2 1941 aa20.25■□□□□ 0.83
HPS4-210ENST00000473782 MORN1Q5T089 497 aa20.25■□□□□ 0.83
HPS4-210ENST00000473782 NUDT12Q9BQG2 462 aa20.25■□□□□ 0.83
HPS4-210ENST00000473782 CAP2P40123 477 aa20.24■□□□□ 0.83
HPS4-210ENST00000473782 BTDP43251 543 aa20.24■□□□□ 0.83
HPS4-210ENST00000473782 SHHQ15465 462 aa20.24■□□□□ 0.83
HPS4-210ENST00000473782 MYLIPQ8WY64 445 aa20.24■□□□□ 0.83
HPS4-210ENST00000473782 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.24■□□□□ 0.83
HPS4-210ENST00000473782 RBPJLQ9UBG7 517 aa20.24■□□□□ 0.83
HPS4-210ENST00000473782 DENND2AQ9ULE3 1009 aa20.24■□□□□ 0.83
HPS4-210ENST00000473782 NPM3O75607 178 aaKnown RBP20.23■□□□□ 0.83
HPS4-210ENST00000473782 HOXA7P31268 230 aaPredicted RBP20.23■□□□□ 0.83
HPS4-210ENST00000473782 JAG1P78504 1218 aa20.23■□□□□ 0.83
HPS4-210ENST00000473782 PABPC4Q13310 644 aaKnown RBP eCLIP20.23■□□□□ 0.83
HPS4-210ENST00000473782 C9orf50Q5SZB4 431 aa20.23■□□□□ 0.83
HPS4-210ENST00000473782 SOCS4Q8WXH5 440 aa20.23■□□□□ 0.83
HPS4-210ENST00000473782 SENP6Q9GZR1 1112 aaPredicted RBP20.23■□□□□ 0.83
HPS4-210ENST00000473782 PORCNQ9H237 461 aa20.23■□□□□ 0.83
HPS4-210ENST00000473782 MAST2Q6P0Q8 1798 aa20.23■□□□□ 0.83
HPS4-210ENST00000473782 GPR75-ASB3A0A0A6YYF3 556 aa20.22■□□□□ 0.83
HPS4-210ENST00000473782 SEMA3EO15041 775 aa20.22■□□□□ 0.83
HPS4-210ENST00000473782 ZKSCAN1P17029 563 aaPredicted RBP20.22■□□□□ 0.83
HPS4-210ENST00000473782 COL9A1P20849 921 aa20.22■□□□□ 0.83
HPS4-210ENST00000473782 ADORA1P30542 326 aa20.22■□□□□ 0.83
HPS4-210ENST00000473782 ATP2B3Q16720 1220 aa20.22■□□□□ 0.83
HPS4-210ENST00000473782 RAPGEFL1Q9UHV5 662 aa20.22■□□□□ 0.83
HPS4-210ENST00000473782 SALL2Q9Y467 1007 aaPredicted RBP20.22■□□□□ 0.83
HPS4-210ENST00000473782 LTBP2Q14767 1821 aa20.21■□□□□ 0.83
HPS4-210ENST00000473782 USP17L5A8MUK1 530 aa20.21■□□□□ 0.83
HPS4-210ENST00000473782 TRMT44Q8IYL2 757 aaKnown RBP20.21■□□□□ 0.83
HPS4-210ENST00000473782 GPRC5AQ8NFJ5 357 aa20.21■□□□□ 0.83
HPS4-210ENST00000473782 LBHD1Q9BQE6 289 aaPredicted RBP20.21■□□□□ 0.83
HPS4-210ENST00000473782 TBC1D2Q9BYX2 928 aa20.21■□□□□ 0.83
HPS4-210ENST00000473782 FLRT1Q9NZU1 646 aa20.21■□□□□ 0.83
HPS4-210ENST00000473782 HERVK_113P62684 666 aa20.2■□□□□ 0.82
HPS4-210ENST00000473782 RASGRF1Q13972 1273 aa20.2■□□□□ 0.82
HPS4-210ENST00000473782 CCDC102BQ68D86 513 aa20.2■□□□□ 0.82
HPS4-210ENST00000473782 GPR142Q7Z601 462 aa20.2■□□□□ 0.82
HPS4-210ENST00000473782 WDR18Q9BV38 432 aa20.2■□□□□ 0.82
HPS4-210ENST00000473782 GNL3LQ9NVN8 582 aaKnown RBP20.2■□□□□ 0.82
HPS4-210ENST00000473782 MROH7-TTC4A0A0A0MT08 1334 aa20.2■□□□□ 0.82
HPS4-210ENST00000473782 ATN1P54259 1190 aaPredicted RBP20.19■□□□□ 0.82
HPS4-210ENST00000473782 BACE1P56817 501 aa20.19■□□□□ 0.82
HPS4-210ENST00000473782 MTMR2Q13614 643 aa20.19■□□□□ 0.82
HPS4-210ENST00000473782 SHROOM1Q2M3G4 852 aaPredicted RBP20.19■□□□□ 0.82
HPS4-210ENST00000473782 FRMPD3Q5JV73 1810 aa20.18■□□□□ 0.82
HPS4-210ENST00000473782 IGHA2P01877 340 aa20.18■□□□□ 0.82
HPS4-210ENST00000473782 MAPK4P31152 587 aa20.18■□□□□ 0.82
HPS4-210ENST00000473782 RGS2P41220 211 aa20.18■□□□□ 0.82
HPS4-210ENST00000473782 ERVK-9P63128 1117 aa20.18■□□□□ 0.82
HPS4-210ENST00000473782 ERVK-24P63145 666 aa20.18■□□□□ 0.82
HPS4-210ENST00000473782 DZIP1Q86YF9 867 aaKnown RBP20.18■□□□□ 0.82
HPS4-210ENST00000473782 ZGPATQ8N5A5 531 aaKnown RBP20.18■□□□□ 0.82
HPS4-210ENST00000473782 CIAO1O76071 339 aa20.17■□□□□ 0.82
HPS4-210ENST00000473782 RTP1P59025 263 aa20.17■□□□□ 0.82
HPS4-210ENST00000473782 IRX3P78415 501 aaPredicted RBP20.17■□□□□ 0.82
HPS4-210ENST00000473782 SMAD3P84022 425 aaKnown RBP20.17■□□□□ 0.82
HPS4-210ENST00000473782 MECOMQ03112 1051 aa20.17■□□□□ 0.82
HPS4-210ENST00000473782 MRPL50Q8N5N7 158 aaKnown RBP20.17■□□□□ 0.82
HPS4-210ENST00000473782 APBA2Q99767 749 aa20.17■□□□□ 0.82
HPS4-210ENST00000473782 SIL1Q9H173 461 aa20.17■□□□□ 0.82
HPS4-210ENST00000473782 CEP126Q9P2H0 1117 aa20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms