RNA–Protein interactions for RNA: ENST00000473344.1

CKS1B-205, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 390 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-205ENST00000473344 FASTKD5Q7L8L6 764 aaKnown RBP8.61□□□□□ -1.03
CKS1B-205ENST00000473344 MRPL50Q8N5N7 158 aaKnown RBP8.61□□□□□ -1.03
CKS1B-205ENST00000473344 SMCR8Q8TEV9 937 aaPredicted RBP8.61□□□□□ -1.03
CKS1B-205ENST00000473344 KHSRPQ92945 711 aaKnown RBP eCLIP8.61□□□□□ -1.03
CKS1B-205ENST00000473344 SIL1Q9H173 461 aa8.61□□□□□ -1.03
CKS1B-205ENST00000473344 ZNF112Q9UJU3 913 aa8.61□□□□□ -1.03
CKS1B-205ENST00000473344 DAGLAQ9Y4D2 1042 aa8.61□□□□□ -1.03
CKS1B-205ENST00000473344 NR2E3Q9Y5X4 410 aa8.61□□□□□ -1.03
CKS1B-205ENST00000473344 ATP2B3Q16720 1220 aa8.6□□□□□ -1.03
CKS1B-205ENST00000473344 GADL1Q6ZQY3 521 aa8.6□□□□□ -1.03
CKS1B-205ENST00000473344 DZIP1Q86YF9 867 aaKnown RBP8.6□□□□□ -1.03
CKS1B-205ENST00000473344 SLF2Q8IX21 1173 aa8.6□□□□□ -1.03
CKS1B-205ENST00000473344 SCYL3Q8IZE3 742 aa8.6□□□□□ -1.03
CKS1B-205ENST00000473344 ZGPATQ8N5A5 531 aaKnown RBP8.6□□□□□ -1.03
CKS1B-205ENST00000473344 SHISA4Q96DD7 197 aa8.6□□□□□ -1.03
CKS1B-205ENST00000473344 USP44Q9H0E7 712 aa8.6□□□□□ -1.03
CKS1B-205ENST00000473344 CEP126Q9P2H0 1117 aa8.6□□□□□ -1.03
CKS1B-205ENST00000473344 RBM27Q9P2N5 1060 aaKnown RBP8.6□□□□□ -1.03
CKS1B-205ENST00000473344 FAM198AQ9UFP1 575 aa8.6□□□□□ -1.03
CKS1B-205ENST00000473344 DENND2AQ9ULE3 1009 aa8.6□□□□□ -1.03
CKS1B-205ENST00000473344 LRRFIP2Q9Y608 721 aaKnown RBP8.6□□□□□ -1.03
CKS1B-205ENST00000473344 ZHX2Q9Y6X8 837 aa8.6□□□□□ -1.03
CKS1B-205ENST00000473344 LAMA3Q16787 3333 aa8.59□□□□□ -1.03
CKS1B-205ENST00000473344 ADGRA2Q96PE1 1338 aa8.59□□□□□ -1.03
CKS1B-205ENST00000473344 TNPO2O14787 897 aaKnown RBP8.59□□□□□ -1.03
CKS1B-205ENST00000473344 SEMA3EO15041 775 aa8.59□□□□□ -1.03
CKS1B-205ENST00000473344 ADCY3O60266 1144 aa8.59□□□□□ -1.03
CKS1B-205ENST00000473344 FARP2O94887 1054 aaPredicted RBP8.59□□□□□ -1.03
CKS1B-205ENST00000473344 TFRCP02786 760 aaKnown RBP8.59□□□□□ -1.03
CKS1B-205ENST00000473344 UBTFL1P0CB47 393 aaPredicted RBP8.59□□□□□ -1.03
CKS1B-205ENST00000473344 ERICH6BQ5W0A0 696 aa8.59□□□□□ -1.03
CKS1B-205ENST00000473344 U2AF1L4Q8WU68 220 aaKnown RBP8.59□□□□□ -1.03
CKS1B-205ENST00000473344 ABCF2Q9UG63 623 aa8.59□□□□□ -1.03
CKS1B-205ENST00000473344 LHX6Q9UPM6 363 aa8.59□□□□□ -1.03
CKS1B-205ENST00000473344 HDAC5Q9UQL6 1122 aa8.59□□□□□ -1.03
CKS1B-205ENST00000473344 SUPT16HQ9Y5B9 1047 aaKnown RBP8.59□□□□□ -1.03
CKS1B-205ENST00000473344 SALL1Q9NSC2 1324 aa8.58□□□□□ -1.04
CKS1B-205ENST00000473344 COL6A3P12111 3177 aa8.58□□□□□ -1.04
CKS1B-205ENST00000473344 A0A0G2JLL6 359 aaPredicted RBP8.58□□□□□ -1.04
CKS1B-205ENST00000473344 TRIM75PA6NK02 468 aa8.58□□□□□ -1.04
CKS1B-205ENST00000473344 E9PSI1 815 aa8.58□□□□□ -1.04
CKS1B-205ENST00000473344 EVI5O60447 810 aa8.58□□□□□ -1.04
CKS1B-205ENST00000473344 ENTPD3O75355 529 aa8.58□□□□□ -1.04
CKS1B-205ENST00000473344 CIAO1O76071 339 aa8.58□□□□□ -1.04
CKS1B-205ENST00000473344 SGPL1O95470 568 aa8.58□□□□□ -1.04
CKS1B-205ENST00000473344 BCRP11274 1271 aa8.58□□□□□ -1.04
CKS1B-205ENST00000473344 CAPN2P17655 700 aa8.58□□□□□ -1.04
CKS1B-205ENST00000473344 PTPRAP18433 802 aa8.58□□□□□ -1.04
CKS1B-205ENST00000473344 IL15P40933 162 aaPredicted RBP8.58□□□□□ -1.04
CKS1B-205ENST00000473344 RFX5P48382 616 aaPredicted RBP8.58□□□□□ -1.04
CKS1B-205ENST00000473344 FLT3LGP49771 235 aa8.58□□□□□ -1.04
CKS1B-205ENST00000473344 RGS3P49796 1198 aa8.58□□□□□ -1.04
CKS1B-205ENST00000473344 PICALMQ13492 652 aa8.58□□□□□ -1.04
CKS1B-205ENST00000473344 MOGSQ13724 837 aa8.58□□□□□ -1.04
CKS1B-205ENST00000473344 GPAT2Q6NUI2 795 aa8.58□□□□□ -1.04
CKS1B-205ENST00000473344 ATG9AQ7Z3C6 839 aa8.58□□□□□ -1.04
CKS1B-205ENST00000473344 PRRT2Q7Z6L0 340 aaPredicted RBP8.58□□□□□ -1.04
CKS1B-205ENST00000473344 ZFPM1Q8IX07 1006 aa8.58□□□□□ -1.04
CKS1B-205ENST00000473344 SSH1Q8WYL5 1049 aa8.58□□□□□ -1.04
CKS1B-205ENST00000473344 COA7Q96BR5 231 aa8.58□□□□□ -1.04
CKS1B-205ENST00000473344 IDI2Q9BXS1 227 aa8.58□□□□□ -1.04
CKS1B-205ENST00000473344 UNC93B1Q9H1C4 597 aa8.58□□□□□ -1.04
CKS1B-205ENST00000473344 TSHZ2Q9NRE2 1034 aa8.58□□□□□ -1.04
CKS1B-205ENST00000473344 SMC4Q9NTJ3 1288 aa8.58□□□□□ -1.04
CKS1B-205ENST00000473344 PNMA3Q9UL41 463 aa8.58□□□□□ -1.04
CKS1B-205ENST00000473344 GABRQQ9UN88 632 aa8.58□□□□□ -1.04
CKS1B-205ENST00000473344 SLC45A1Q9Y2W3 748 aa8.58□□□□□ -1.04
CKS1B-205ENST00000473344 ZSWIM8A7E2V4 1837 aa8.58□□□□□ -1.04
CKS1B-205ENST00000473344 PHF20L1A8MW92 1017 aa8.57□□□□□ -1.04
CKS1B-205ENST00000473344 CTNND1O60716 968 aaKnown RBP8.57□□□□□ -1.04
CKS1B-205ENST00000473344 INHAP05111 366 aa8.57□□□□□ -1.04
CKS1B-205ENST00000473344 ELNP15502 786 aa8.57□□□□□ -1.04
CKS1B-205ENST00000473344 PHKA1P46020 1223 aa8.57□□□□□ -1.04
CKS1B-205ENST00000473344 SPTY2D1Q68D10 685 aaPredicted RBP8.57□□□□□ -1.04
CKS1B-205ENST00000473344 CCDC102BQ68D86 513 aa8.57□□□□□ -1.04
CKS1B-205ENST00000473344 UBE2Q1Q7Z7E8 422 aa8.57□□□□□ -1.04
CKS1B-205ENST00000473344 PXYLP1Q8TE99 480 aa8.57□□□□□ -1.04
CKS1B-205ENST00000473344 DEFB118Q96PH6 123 aa8.57□□□□□ -1.04
CKS1B-205ENST00000473344 AFG3L2Q9Y4W6 797 aa8.57□□□□□ -1.04
CKS1B-205ENST00000473344 A0A0C4DFX4 3053 aa8.56□□□□□ -1.04
CKS1B-205ENST00000473344 ARHGAP33O14559 1287 aa8.56□□□□□ -1.04
CKS1B-205ENST00000473344 BTDP43251 543 aa8.56□□□□□ -1.04
CKS1B-205ENST00000473344 PABPC4Q13310 644 aaKnown RBP eCLIP8.56□□□□□ -1.04
CKS1B-205ENST00000473344 IRF5Q13568 498 aa8.56□□□□□ -1.04
CKS1B-205ENST00000473344 ALDH1L2Q3SY69 923 aa8.56□□□□□ -1.04
CKS1B-205ENST00000473344 ANKRD13CQ8N6S4 541 aa8.56□□□□□ -1.04
CKS1B-205ENST00000473344 YTHDC1Q96MU7 727 aaKnown RBP8.56□□□□□ -1.04
CKS1B-205ENST00000473344 HCSTQ9UBK5 93 aa8.56□□□□□ -1.04
CKS1B-205ENST00000473344 AGTPBP1Q9UPW5 1226 aa8.56□□□□□ -1.04
CKS1B-205ENST00000473344 GAKO14976 1311 aa8.55□□□□□ -1.04
CKS1B-205ENST00000473344 ZNF521Q96K83 1311 aa8.55□□□□□ -1.04
CKS1B-205ENST00000473344 A0A1W2PPC1 479 aa8.55□□□□□ -1.04
CKS1B-205ENST00000473344 DDTLA6NHG4 134 aaPredicted RBP8.55□□□□□ -1.04
CKS1B-205ENST00000473344 ZBTB7BO15156 539 aaPredicted RBP8.55□□□□□ -1.04
CKS1B-205ENST00000473344 TIMM10P62072 90 aa8.55□□□□□ -1.04
CKS1B-205ENST00000473344 MVPQ14764 893 aaKnown RBP8.55□□□□□ -1.04
CKS1B-205ENST00000473344 GORABQ5T7V8 394 aa8.55□□□□□ -1.04
CKS1B-205ENST00000473344 SH3BP5LQ7L8J4 393 aa8.55□□□□□ -1.04
CKS1B-205ENST00000473344 NECAB2Q7Z6G3 386 aa8.55□□□□□ -1.04
CKS1B-205ENST00000473344 SLC17A8Q8NDX2 589 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms