RNA–Protein interactions for RNA: ENST00000473079.1

EPHB3-202, Transcript of EPH receptor B3, humanhuman

TSL 2

Gene EPHB3, Length 486 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3-202ENST00000473079 FOXP4Q8IVH2 680 aaPredicted RBP25.3■■□□□ 1.64
EPHB3-202ENST00000473079 TBC1D2Q9BYX2 928 aa25.3■■□□□ 1.64
EPHB3-202ENST00000473079 ANTXR1Q9H6X2 564 aa25.3■■□□□ 1.64
EPHB3-202ENST00000473079 SLC45A1Q9Y2W3 748 aa25.3■■□□□ 1.64
EPHB3-202ENST00000473079 FLT1P17948 1338 aa25.3■■□□□ 1.64
EPHB3-202ENST00000473079 ADGRA2Q96PE1 1338 aa25.3■■□□□ 1.64
EPHB3-202ENST00000473079 FAM196BA6NMK8 535 aa25.29■■□□□ 1.64
EPHB3-202ENST00000473079 GNRH1P01148 92 aa25.29■■□□□ 1.64
EPHB3-202ENST00000473079 CAP2P40123 477 aa25.29■■□□□ 1.64
EPHB3-202ENST00000473079 KIF22Q14807 665 aa25.29■■□□□ 1.64
EPHB3-202ENST00000473079 TTF1Q15361 905 aaPredicted RBP25.29■■□□□ 1.64
EPHB3-202ENST00000473079 MAPKAPK5Q8IW41 473 aa25.29■■□□□ 1.64
EPHB3-202ENST00000473079 NDUFB9Q9Y6M9 179 aa25.29■■□□□ 1.64
EPHB3-202ENST00000473079 IFIT2P09913 472 aaKnown RBP25.28■■□□□ 1.64
EPHB3-202ENST00000473079 DYNLL1P63167 89 aaKnown RBP25.28■■□□□ 1.64
EPHB3-202ENST00000473079 MAGEB6Q8N7X4 407 aa25.28■■□□□ 1.64
EPHB3-202ENST00000473079 ARMC5Q96C12 935 aa25.28■■□□□ 1.64
EPHB3-202ENST00000473079 PARK7Q99497 189 aaKnown RBP25.28■■□□□ 1.64
EPHB3-202ENST00000473079 DOCK1Q14185 1865 aa25.28■■□□□ 1.64
EPHB3-202ENST00000473079 APBB1O00213 710 aa25.27■■□□□ 1.64
EPHB3-202ENST00000473079 HTTP42858 3142 aa25.27■■□□□ 1.64
EPHB3-202ENST00000473079 RRP1BQ14684 758 aaKnown RBP25.26■■□□□ 1.63
EPHB3-202ENST00000473079 CPA4Q9UI42 421 aa25.26■■□□□ 1.63
EPHB3-202ENST00000473079 MYO5AQ9Y4I1 1855 aaKnown RBP25.26■■□□□ 1.63
EPHB3-202ENST00000473079 PRMT2P55345 433 aa25.25■■□□□ 1.63
EPHB3-202ENST00000473079 GADL1Q6ZQY3 521 aa25.25■■□□□ 1.63
EPHB3-202ENST00000473079 FRMD4AQ9P2Q2 1039 aaPredicted RBP25.25■■□□□ 1.63
EPHB3-202ENST00000473079 PALD1Q9ULE6 856 aa25.25■■□□□ 1.63
EPHB3-202ENST00000473079 TRIM75PA6NK02 468 aa25.24■■□□□ 1.63
EPHB3-202ENST00000473079 USP17L5A8MUK1 530 aa25.24■■□□□ 1.63
EPHB3-202ENST00000473079 BCRP11274 1271 aa25.24■■□□□ 1.63
EPHB3-202ENST00000473079 MIGA1Q8NAN2 632 aa25.24■■□□□ 1.63
EPHB3-202ENST00000473079 ZNF280CQ8ND82 737 aa25.24■■□□□ 1.63
EPHB3-202ENST00000473079 ARHGAP39Q9C0H5 1083 aa25.24■■□□□ 1.63
EPHB3-202ENST00000473079 GINM1Q9NU53 330 aa25.24■■□□□ 1.63
EPHB3-202ENST00000473079 PHIPQ8WWQ0 1821 aa25.23■■□□□ 1.63
EPHB3-202ENST00000473079 CYP2C8P10632 490 aa25.23■■□□□ 1.63
EPHB3-202ENST00000473079 SPP2Q13103 211 aa25.23■■□□□ 1.63
EPHB3-202ENST00000473079 CCDC84Q86UT8 332 aaPredicted RBP25.23■■□□□ 1.63
EPHB3-202ENST00000473079 PROCA1Q8NCQ7 364 aaPredicted RBP25.23■■□□□ 1.63
EPHB3-202ENST00000473079 DNAJC18Q9H819 358 aa25.23■■□□□ 1.63
EPHB3-202ENST00000473079 AGTPBP1Q9UPW5 1226 aa25.23■■□□□ 1.63
EPHB3-202ENST00000473079 FOCADQ5VW36 1801 aa25.22■■□□□ 1.63
EPHB3-202ENST00000473079 HLA-DOAP06340 250 aa25.22■■□□□ 1.63
EPHB3-202ENST00000473079 ASNSP08243 561 aa25.22■■□□□ 1.63
EPHB3-202ENST00000473079 ATP5JP18859 108 aa25.22■■□□□ 1.63
EPHB3-202ENST00000473079 CRACR2BQ8N4Y2 399 aaPredicted RBP25.22■■□□□ 1.63
EPHB3-202ENST00000473079 RIOK1Q9BRS2 568 aaKnown RBP25.22■■□□□ 1.63
EPHB3-202ENST00000473079 WDR18Q9BV38 432 aa25.22■■□□□ 1.63
EPHB3-202ENST00000473079 AS3MTQ9HBK9 375 aa25.22■■□□□ 1.63
EPHB3-202ENST00000473079 PTCH2Q9Y6C5 1203 aa25.22■■□□□ 1.63
EPHB3-202ENST00000473079 PSMC4P43686 418 aa25.21■■□□□ 1.63
EPHB3-202ENST00000473079 SH3D19Q5HYK7 790 aa25.21■■□□□ 1.63
EPHB3-202ENST00000473079 SLC9C2Q5TAH2 1124 aa25.21■■□□□ 1.63
EPHB3-202ENST00000473079 NBPF11Q86T75 865 aa25.21■■□□□ 1.63
EPHB3-202ENST00000473079 TRIM47Q96LD4 638 aa25.21■■□□□ 1.63
EPHB3-202ENST00000473079 LRRCC1Q9C099 1032 aa25.21■■□□□ 1.63
EPHB3-202ENST00000473079 CDK5RAP2Q96SN8 1893 aa25.21■■□□□ 1.63
EPHB3-202ENST00000473079 SIPA1L1O43166 1804 aa25.21■■□□□ 1.63
EPHB3-202ENST00000473079 GOLIM4O00461 696 aa25.2■■□□□ 1.62
EPHB3-202ENST00000473079 TNRC18O15417 2968 aaPredicted RBP25.2■■□□□ 1.62
EPHB3-202ENST00000473079 PDE6AP16499 860 aa25.2■■□□□ 1.62
EPHB3-202ENST00000473079 CTGFP29279 349 aa25.2■■□□□ 1.62
EPHB3-202ENST00000473079 USP5P45974 858 aa25.2■■□□□ 1.62
EPHB3-202ENST00000473079 TRIM34Q9BYJ4 488 aa25.2■■□□□ 1.62
EPHB3-202ENST00000473079 SAP30BPQ9UHR5 308 aaKnown RBP25.2■■□□□ 1.62
EPHB3-202ENST00000473079 HOXD10P28358 340 aa25.19■■□□□ 1.62
EPHB3-202ENST00000473079 SLC9C1Q4G0N8 1177 aa25.19■■□□□ 1.62
EPHB3-202ENST00000473079 ZNF333Q96JL9 665 aa25.19■■□□□ 1.62
EPHB3-202ENST00000473079 DNAJC2Q99543 621 aaKnown RBP25.19■■□□□ 1.62
EPHB3-202ENST00000473079 EHD4Q9H223 541 aa25.19■■□□□ 1.62
EPHB3-202ENST00000473079 SRRDQ9UH36 339 aa25.19■■□□□ 1.62
EPHB3-202ENST00000473079 PTPRFP10586 1907 aa25.18■■□□□ 1.62
EPHB3-202ENST00000473079 MAGEB6P1A0A0J9YX57 407 aa25.18■■□□□ 1.62
EPHB3-202ENST00000473079 TCRBV5S4A2TA0A5A2 114 aa25.18■■□□□ 1.62
EPHB3-202ENST00000473079 JAG1P78504 1218 aa25.18■■□□□ 1.62
EPHB3-202ENST00000473079 TREML2Q5T2D2 321 aa25.18■■□□□ 1.62
EPHB3-202ENST00000473079 TTC6Q86TZ1 520 aa25.18■■□□□ 1.62
EPHB3-202ENST00000473079 DCTPP1Q9H773 170 aa25.18■■□□□ 1.62
EPHB3-202ENST00000473079 PAG1Q9NWQ8 432 aa25.18■■□□□ 1.62
EPHB3-202ENST00000473079 FMNL1O95466 1100 aaPredicted RBP25.17■■□□□ 1.62
EPHB3-202ENST00000473079 PABPC4Q13310 644 aaKnown RBP eCLIP25.17■■□□□ 1.62
EPHB3-202ENST00000473079 TATDN1Q6P1N9 297 aa25.17■■□□□ 1.62
EPHB3-202ENST00000473079 HAUS7Q99871 368 aa25.17■■□□□ 1.62
EPHB3-202ENST00000473079 PNMA3Q9UL41 463 aa25.17■■□□□ 1.62
EPHB3-202ENST00000473079 ZNF532Q9HCE3 1301 aa25.16■■□□□ 1.62
EPHB3-202ENST00000473079 OSBPP22059 807 aa25.16■■□□□ 1.62
EPHB3-202ENST00000473079 HMGCS2P54868 508 aa25.16■■□□□ 1.62
EPHB3-202ENST00000473079 BACE1P56817 501 aa25.16■■□□□ 1.62
EPHB3-202ENST00000473079 SMCR8Q8TEV9 937 aaPredicted RBP25.16■■□□□ 1.62
EPHB3-202ENST00000473079 BOLA2Q9H3K6 86 aa25.16■■□□□ 1.62
EPHB3-202ENST00000473079 SERPINB13Q9UIV8 391 aa25.16■■□□□ 1.62
EPHB3-202ENST00000473079 ZBTB21Q9ULJ3 1066 aa25.16■■□□□ 1.62
EPHB3-202ENST00000473079 FCGRTP55899 365 aa25.15■■□□□ 1.62
EPHB3-202ENST00000473079 CRNKL1Q9BZJ0 848 aaKnown RBP25.15■■□□□ 1.62
EPHB3-202ENST00000473079 BCL11AQ9H165 835 aa25.15■■□□□ 1.62
EPHB3-202ENST00000473079 ATAD5Q96QE3 1844 aa25.14■■□□□ 1.62
EPHB3-202ENST00000473079 POTEFA5A3E0 1075 aa25.14■■□□□ 1.62
EPHB3-202ENST00000473079 C19orf81C9J6K1 198 aa25.14■■□□□ 1.62
EPHB3-202ENST00000473079 EDC3Q96F86 508 aaKnown RBP25.14■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms