RNA–Protein interactions for RNA: ENST00000472892.1

VTI1A-203, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 1 (best)

Gene VTI1A, Length 1,247 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-203ENST00000472892 CYP2C8P10632 490 aa18.71■□□□□ 0.59
VTI1A-203ENST00000472892 BCRP11274 1271 aa18.71■□□□□ 0.59
VTI1A-203ENST00000472892 CTGFP29279 349 aa18.71■□□□□ 0.59
VTI1A-203ENST00000472892 SLC9C1Q4G0N8 1177 aa18.71■□□□□ 0.59
VTI1A-203ENST00000472892 ERC1Q8IUD2 1116 aa18.71■□□□□ 0.59
VTI1A-203ENST00000472892 DHX36Q9H2U1 1008 aaKnown RBP18.71■□□□□ 0.59
VTI1A-203ENST00000472892 PI4KBQ9UBF8 816 aa18.71■□□□□ 0.59
VTI1A-203ENST00000472892 EXOC6BQ9Y2D4 811 aa18.71■□□□□ 0.59
VTI1A-203ENST00000472892 DSG3P32926 999 aa18.7■□□□□ 0.58
VTI1A-203ENST00000472892 PSMC4P43686 418 aa18.7■□□□□ 0.58
VTI1A-203ENST00000472892 TRIM47Q96LD4 638 aa18.7■□□□□ 0.58
VTI1A-203ENST00000472892 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.7■□□□□ 0.58
VTI1A-203ENST00000472892 HERC5Q9UII4 1024 aaKnown RBP18.7■□□□□ 0.58
VTI1A-203ENST00000472892 TRIM75PA6NK02 468 aa18.69■□□□□ 0.58
VTI1A-203ENST00000472892 CAP2P40123 477 aa18.69■□□□□ 0.58
VTI1A-203ENST00000472892 RRP1BQ14684 758 aaKnown RBP18.69■□□□□ 0.58
VTI1A-203ENST00000472892 HSP90AB4PQ58FF6 505 aa18.69■□□□□ 0.58
VTI1A-203ENST00000472892 GADL1Q6ZQY3 521 aa18.69■□□□□ 0.58
VTI1A-203ENST00000472892 METTL16Q86W50 562 aaKnown RBP18.69■□□□□ 0.58
VTI1A-203ENST00000472892 RPAP2Q8IXW5 612 aaPredicted RBP18.69■□□□□ 0.58
VTI1A-203ENST00000472892 TGFBRAP1Q8WUH2 860 aa18.69■□□□□ 0.58
VTI1A-203ENST00000472892 TMEM106CQ9BVX2 250 aa18.69■□□□□ 0.58
VTI1A-203ENST00000472892 PDE4DIPQ5VU43 2346 aa18.68■□□□□ 0.58
VTI1A-203ENST00000472892 HOXD10P28358 340 aa18.68■□□□□ 0.58
VTI1A-203ENST00000472892 CCDC84Q86UT8 332 aaPredicted RBP18.68■□□□□ 0.58
VTI1A-203ENST00000472892 AACSQ86V21 672 aa18.68■□□□□ 0.58
VTI1A-203ENST00000472892 FOXP4Q8IVH2 680 aaPredicted RBP18.68■□□□□ 0.58
VTI1A-203ENST00000472892 TBC1D2Q9BYX2 928 aa18.68■□□□□ 0.58
VTI1A-203ENST00000472892 ZBTB40Q9NUA8 1239 aa18.68■□□□□ 0.58
VTI1A-203ENST00000472892 SRRDQ9UH36 339 aa18.68■□□□□ 0.58
VTI1A-203ENST00000472892 DDX19BQ9UMR2 479 aa18.68■□□□□ 0.58
VTI1A-203ENST00000472892 DOCK1Q14185 1865 aa18.67■□□□□ 0.58
VTI1A-203ENST00000472892 FMNL1O95466 1100 aaPredicted RBP18.67■□□□□ 0.58
VTI1A-203ENST00000472892 EN2P19622 333 aaPredicted RBP18.67■□□□□ 0.58
VTI1A-203ENST00000472892 OSBPP22059 807 aa18.67■□□□□ 0.58
VTI1A-203ENST00000472892 CYP7A1P22680 504 aa18.67■□□□□ 0.58
VTI1A-203ENST00000472892 SPP2Q13103 211 aa18.67■□□□□ 0.58
VTI1A-203ENST00000472892 PRPF38BQ5VTL8 546 aaKnown RBP18.67■□□□□ 0.58
VTI1A-203ENST00000472892 MAPKAPK5Q8IW41 473 aa18.67■□□□□ 0.58
VTI1A-203ENST00000472892 ZNF280CQ8ND82 737 aa18.67■□□□□ 0.58
VTI1A-203ENST00000472892 RHPN1Q8TCX5 695 aa18.67■□□□□ 0.58
VTI1A-203ENST00000472892 AGTPBP1Q9UPW5 1226 aa18.67■□□□□ 0.58
VTI1A-203ENST00000472892 COG6Q9Y2V7 657 aa18.67■□□□□ 0.58
VTI1A-203ENST00000472892 FLT1P17948 1338 aa18.67■□□□□ 0.58
VTI1A-203ENST00000472892 ZSWIM8A7E2V4 1837 aa18.66■□□□□ 0.58
VTI1A-203ENST00000472892 PHIPQ8WWQ0 1821 aa18.66■□□□□ 0.58
VTI1A-203ENST00000472892 IDH1O75874 414 aaKnown RBP18.66■□□□□ 0.58
VTI1A-203ENST00000472892 ECM2O94769 699 aaPredicted RBP18.66■□□□□ 0.58
VTI1A-203ENST00000472892 TMED8Q6PL24 325 aaPredicted RBP18.66■□□□□ 0.58
VTI1A-203ENST00000472892 SIRT2Q8IXJ6 389 aa18.66■□□□□ 0.58
VTI1A-203ENST00000472892 PROCA1Q8NCQ7 364 aaPredicted RBP18.66■□□□□ 0.58
VTI1A-203ENST00000472892 SH3TC2Q8TF17 1288 aa18.66■□□□□ 0.58
VTI1A-203ENST00000472892 ANTXR1Q9H6X2 564 aa18.66■□□□□ 0.58
VTI1A-203ENST00000472892 BRCA2P51587 3418 aa18.65■□□□□ 0.58
VTI1A-203ENST00000472892 USP17L5A8MUK1 530 aa18.65■□□□□ 0.58
VTI1A-203ENST00000472892 DYNLL1P63167 89 aaKnown RBP18.65■□□□□ 0.58
VTI1A-203ENST00000472892 CERS3Q8IU89 383 aa18.65■□□□□ 0.58
VTI1A-203ENST00000472892 IL1RAPL2Q9NP60 686 aa18.65■□□□□ 0.58
VTI1A-203ENST00000472892 RCAN3Q9UKA8 241 aa18.65■□□□□ 0.58
VTI1A-203ENST00000472892 PALD1Q9ULE6 856 aa18.65■□□□□ 0.58
VTI1A-203ENST00000472892 NDUFB9Q9Y6M9 179 aa18.65■□□□□ 0.58
VTI1A-203ENST00000472892 MAST2Q6P0Q8 1798 aa18.65■□□□□ 0.58
VTI1A-203ENST00000472892 RBBP6Q7Z6E9 1792 aaKnown RBP18.65■□□□□ 0.58
VTI1A-203ENST00000472892 HMMRO75330 724 aa18.64■□□□□ 0.57
VTI1A-203ENST00000472892 FCGRTP55899 365 aa18.64■□□□□ 0.57
VTI1A-203ENST00000472892 MAP3K12Q12852 859 aa18.64■□□□□ 0.57
VTI1A-203ENST00000472892 SLC4A8Q2Y0W8 1093 aa18.64■□□□□ 0.57
VTI1A-203ENST00000472892 SH3D19Q5HYK7 790 aa18.64■□□□□ 0.57
VTI1A-203ENST00000472892 TREML2Q5T2D2 321 aa18.64■□□□□ 0.57
VTI1A-203ENST00000472892 MAGEB6Q8N7X4 407 aa18.64■□□□□ 0.57
VTI1A-203ENST00000472892 KIF1BPQ96EK5 621 aa18.64■□□□□ 0.57
VTI1A-203ENST00000472892 CHMP4BQ9H444 224 aaKnown RBP18.64■□□□□ 0.57
VTI1A-203ENST00000472892 DNAJC18Q9H819 358 aa18.64■□□□□ 0.57
VTI1A-203ENST00000472892 KIAA0100Q14667 2235 aaKnown RBP18.64■□□□□ 0.57
VTI1A-203ENST00000472892 JAG1P78504 1218 aa18.63■□□□□ 0.57
VTI1A-203ENST00000472892 CLASRPQ8N2M8 674 aaKnown RBP18.63■□□□□ 0.57
VTI1A-203ENST00000472892 RAET1EQ8TD07 263 aa18.63■□□□□ 0.57
VTI1A-203ENST00000472892 SMCR8Q8TEV9 937 aaPredicted RBP18.63■□□□□ 0.57
VTI1A-203ENST00000472892 WDR18Q9BV38 432 aa18.63■□□□□ 0.57
VTI1A-203ENST00000472892 AS3MTQ9HBK9 375 aa18.63■□□□□ 0.57
VTI1A-203ENST00000472892 MYPNQ86TC9 1320 aa18.63■□□□□ 0.57
VTI1A-203ENST00000472892 MYO5AQ9Y4I1 1855 aaKnown RBP18.63■□□□□ 0.57
VTI1A-203ENST00000472892 PTPRFP10586 1907 aa18.62■□□□□ 0.57
VTI1A-203ENST00000472892 MKI67P46013 3256 aaKnown RBP18.62■□□□□ 0.57
VTI1A-203ENST00000472892 ASNSP08243 561 aa18.62■□□□□ 0.57
VTI1A-203ENST00000472892 GRK4P32298 578 aa18.62■□□□□ 0.57
VTI1A-203ENST00000472892 HMGCS2P54868 508 aa18.62■□□□□ 0.57
VTI1A-203ENST00000472892 PRKCZQ05513 592 aa18.62■□□□□ 0.57
VTI1A-203ENST00000472892 CRACR2BQ8N4Y2 399 aaPredicted RBP18.62■□□□□ 0.57
VTI1A-203ENST00000472892 MIGA1Q8NAN2 632 aa18.62■□□□□ 0.57
VTI1A-203ENST00000472892 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.62■□□□□ 0.57
VTI1A-203ENST00000472892 GINM1Q9NU53 330 aa18.62■□□□□ 0.57
VTI1A-203ENST00000472892 SAP30BPQ9UHR5 308 aaKnown RBP18.62■□□□□ 0.57
VTI1A-203ENST00000472892 PNMA3Q9UL41 463 aa18.62■□□□□ 0.57
VTI1A-203ENST00000472892 RAB11FIP3O75154 756 aa18.61■□□□□ 0.57
VTI1A-203ENST00000472892 MYCP01106 439 aaPredicted RBP18.61■□□□□ 0.57
VTI1A-203ENST00000472892 HLA-DOAP06340 250 aa18.61■□□□□ 0.57
VTI1A-203ENST00000472892 TTF1Q15361 905 aaPredicted RBP18.61■□□□□ 0.57
VTI1A-203ENST00000472892 SIPA1L1O43166 1804 aa18.6■□□□□ 0.57
VTI1A-203ENST00000472892 SLC34A2O95436 690 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms