RNA–Protein interactions for RNA: ENST00000472725.5

SF1-213, Transcript of splicing factor 1, humanhuman

TSL 3

Gene SF1, Length 632 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-213ENST00000472725 CASC1Q6TDU7 716 aa23.89■■□□□ 1.41
SF1-213ENST00000472725 IFNL3Q8IZI9 196 aa23.89■■□□□ 1.41
SF1-213ENST00000472725 TRIM34Q9BYJ4 488 aa23.89■■□□□ 1.41
SF1-213ENST00000472725 USP17L12C9JPN9 530 aa23.88■■□□□ 1.41
SF1-213ENST00000472725 USP17L21D6R901 530 aa23.88■■□□□ 1.41
SF1-213ENST00000472725 DEFB115Q30KQ5 88 aa23.88■■□□□ 1.41
SF1-213ENST00000472725 C12orf60Q5U649 245 aa23.88■■□□□ 1.41
SF1-213ENST00000472725 CCDC129Q6ZRS4 1044 aa23.88■■□□□ 1.41
SF1-213ENST00000472725 MIGA2Q7L4E1 593 aa23.88■■□□□ 1.41
SF1-213ENST00000472725 ZNF589Q86UQ0 364 aaPredicted RBP23.88■■□□□ 1.41
SF1-213ENST00000472725 CRACR2BQ8N4Y2 399 aaPredicted RBP23.88■■□□□ 1.41
SF1-213ENST00000472725 XPO5Q9HAV4 1204 aaKnown RBP eCLIP23.88■■□□□ 1.41
SF1-213ENST00000472725 UBE2Q2LH0YL09 131 aa23.87■■□□□ 1.41
SF1-213ENST00000472725 CDC45O75419 566 aa23.87■■□□□ 1.41
SF1-213ENST00000472725 HSPD1P10809 573 aaKnown RBP23.87■■□□□ 1.41
SF1-213ENST00000472725 TDO2P48775 406 aa23.87■■□□□ 1.41
SF1-213ENST00000472725 PRKG1Q13976 671 aa23.87■■□□□ 1.41
SF1-213ENST00000472725 CTR9Q6PD62 1173 aa23.87■■□□□ 1.41
SF1-213ENST00000472725 NAPBQ9H115 298 aa23.87■■□□□ 1.41
SF1-213ENST00000472725 EPB41L4AQ9HCS5 686 aaPredicted RBP23.87■■□□□ 1.41
SF1-213ENST00000472725 SWAP70Q9UH65 585 aa23.87■■□□□ 1.41
SF1-213ENST00000472725 GTF3C3Q9Y5Q9 886 aa23.87■■□□□ 1.41
SF1-213ENST00000472725 CSADQ9Y600 493 aa23.87■■□□□ 1.41
SF1-213ENST00000472725 OTOFQ9HC10 1997 aa23.86■■□□□ 1.41
SF1-213ENST00000472725 PHF20L1A8MW92 1017 aa23.86■■□□□ 1.41
SF1-213ENST00000472725 PLCD1P51178 756 aa23.86■■□□□ 1.41
SF1-213ENST00000472725 GABPAQ06546 454 aa23.86■■□□□ 1.41
SF1-213ENST00000472725 RGMBQ6NW40 437 aa23.86■■□□□ 1.41
SF1-213ENST00000472725 MOB2Q70IA6 237 aa23.86■■□□□ 1.41
SF1-213ENST00000472725 CCDC102AQ96A19 550 aa23.86■■□□□ 1.41
SF1-213ENST00000472725 WRNIP1Q96S55 665 aa23.86■■□□□ 1.41
SF1-213ENST00000472725 DSCC1Q9BVC3 393 aa23.86■■□□□ 1.41
SF1-213ENST00000472725 GINM1Q9NU53 330 aa23.86■■□□□ 1.41
SF1-213ENST00000472725 SGSM2O43147 1006 aa23.85■■□□□ 1.41
SF1-213ENST00000472725 CTNND1O60716 968 aaKnown RBP23.85■■□□□ 1.41
SF1-213ENST00000472725 ECE1P42892 770 aa23.85■■□□□ 1.41
SF1-213ENST00000472725 NOL9Q5SY16 702 aaKnown RBP23.85■■□□□ 1.41
SF1-213ENST00000472725 LAMB1P07942 1786 aa23.85■■□□□ 1.41
SF1-213ENST00000472725 ROBO3Q96MS0 1386 aa23.84■■□□□ 1.41
SF1-213ENST00000472725 FOXP2O15409 715 aa23.84■■□□□ 1.41
SF1-213ENST00000472725 PPP1R3FQ6ZSY5 799 aaPredicted RBP23.84■■□□□ 1.41
SF1-213ENST00000472725 VPS53Q5VIR6 699 aa23.83■■□□□ 1.41
SF1-213ENST00000472725 TATDN1Q6P1N9 297 aa23.83■■□□□ 1.41
SF1-213ENST00000472725 SLC10A4Q96EP9 437 aa23.83■■□□□ 1.41
SF1-213ENST00000472725 ZNF287Q9HBT7 754 aa23.83■■□□□ 1.41
SF1-213ENST00000472725 FZD1Q9UP38 647 aa23.83■■□□□ 1.41
SF1-213ENST00000472725 FGAP02671 866 aa23.82■■□□□ 1.4
SF1-213ENST00000472725 SLC3A2P08195 630 aaKnown RBP23.82■■□□□ 1.4
SF1-213ENST00000472725 ZNF157P51786 506 aaPredicted RBP23.82■■□□□ 1.4
SF1-213ENST00000472725 VGLL4Q14135 290 aa23.82■■□□□ 1.4
SF1-213ENST00000472725 C16orf86Q6ZW13 317 aa23.82■■□□□ 1.4
SF1-213ENST00000472725 DNAJC18Q9H819 358 aa23.82■■□□□ 1.4
SF1-213ENST00000472725 CTNNA3Q9UI47 895 aa23.82■■□□□ 1.4
SF1-213ENST00000472725 DOCK1Q14185 1865 aa23.81■■□□□ 1.4
SF1-213ENST00000472725 MYH8P13535 1937 aa23.81■■□□□ 1.4
SF1-213ENST00000472725 CAP2P40123 477 aa23.81■■□□□ 1.4
SF1-213ENST00000472725 SCYL3Q8IZE3 742 aa23.81■■□□□ 1.4
SF1-213ENST00000472725 ESYT1Q9BSJ8 1104 aa23.81■■□□□ 1.4
SF1-213ENST00000472725 ANAPC4Q9UJX5 808 aa23.81■■□□□ 1.4
SF1-213ENST00000472725 MINDY4BA8MYZ0 360 aa23.8■■□□□ 1.4
SF1-213ENST00000472725 SLC10A3P09131 477 aa23.8■■□□□ 1.4
SF1-213ENST00000472725 CYP2D6P10635 497 aa23.8■■□□□ 1.4
SF1-213ENST00000472725 INPP5BP32019 993 aa23.8■■□□□ 1.4
SF1-213ENST00000472725 KIAA1211Q6ZU35 1233 aa23.8■■□□□ 1.4
SF1-213ENST00000472725 ERO1BQ86YB8 467 aa23.8■■□□□ 1.4
SF1-213ENST00000472725 CCDC17Q96LX7 622 aa23.8■■□□□ 1.4
SF1-213ENST00000472725 TBC1D2Q9BYX2 928 aa23.8■■□□□ 1.4
SF1-213ENST00000472725 FAM196BA6NMK8 535 aa23.79■■□□□ 1.4
SF1-213ENST00000472725 ASNSP08243 561 aa23.79■■□□□ 1.4
SF1-213ENST00000472725 ZBTB48P10074 688 aaPredicted RBP23.79■■□□□ 1.4
SF1-213ENST00000472725 PPARAQ07869 468 aa23.79■■□□□ 1.4
SF1-213ENST00000472725 SLC4A8Q2Y0W8 1093 aa23.79■■□□□ 1.4
SF1-213ENST00000472725 RASAL3Q86YV0 1011 aa23.79■■□□□ 1.4
SF1-213ENST00000472725 ZKSCAN4Q969J2 545 aaPredicted RBP23.79■■□□□ 1.4
SF1-213ENST00000472725 IL25Q9H293 177 aa23.79■■□□□ 1.4
SF1-213ENST00000472725 PICK1Q9NRD5 415 aa23.79■■□□□ 1.4
SF1-213ENST00000472725 SNCAIPQ9Y6H5 919 aa23.79■■□□□ 1.4
SF1-213ENST00000472725 ATAD5Q96QE3 1844 aa23.79■■□□□ 1.4
SF1-213ENST00000472725 CYP2D7A0A087X1C5 515 aa23.78■■□□□ 1.4
SF1-213ENST00000472725 SPDYE5A6NIY4 337 aa23.78■■□□□ 1.4
SF1-213ENST00000472725 PCP11498 1178 aaKnown RBP23.78■■□□□ 1.4
SF1-213ENST00000472725 SHMT1P34896 483 aa23.78■■□□□ 1.4
SF1-213ENST00000472725 CDK8P49336 464 aa23.78■■□□□ 1.4
SF1-213ENST00000472725 NT5C2P49902 561 aa23.78■■□□□ 1.4
SF1-213ENST00000472725 HTRA3P83110 453 aa23.78■■□□□ 1.4
SF1-213ENST00000472725 PPATQ06203 517 aa23.78■■□□□ 1.4
SF1-213ENST00000472725 PDE4BQ07343 736 aa23.78■■□□□ 1.4
SF1-213ENST00000472725 NOGQ13253 232 aa23.78■■□□□ 1.4
SF1-213ENST00000472725 CERKLQ49MI3 558 aaPredicted RBP23.78■■□□□ 1.4
SF1-213ENST00000472725 CLMNQ96JQ2 1002 aa23.78■■□□□ 1.4
SF1-213ENST00000472725 CAPNS2Q96L46 248 aa23.78■■□□□ 1.4
SF1-213ENST00000472725 PAXIP1Q6ZW49 1069 aaPredicted RBP23.77■■□□□ 1.4
SF1-213ENST00000472725 REM2Q8IYK8 340 aaPredicted RBP23.77■■□□□ 1.4
SF1-213ENST00000472725 WDR33Q9C0J8 1336 aaKnown RBP23.77■■□□□ 1.4
SF1-213ENST00000472725 LAMA4Q16363 1823 aa23.76■■□□□ 1.39
SF1-213ENST00000472725 FAM155AB1AL88 458 aaPredicted RBP23.76■■□□□ 1.39
SF1-213ENST00000472725 EIF5BO60841 1220 aaKnown RBP23.76■■□□□ 1.39
SF1-213ENST00000472725 SLURP2P0DP57 97 aa23.76■■□□□ 1.39
SF1-213ENST00000472725 MAP2K2P36507 400 aa23.76■■□□□ 1.39
SF1-213ENST00000472725 SPRYD7Q5W111 196 aa23.76■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms