RNA–Protein interactions for RNA: ENST00000472119.1

SCN9A-206, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

TSL 2

Gene SCN9A, Length 905 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-206ENST00000472119 NFICP08651 508 aa9.83□□□□□ -0.84
SCN9A-206ENST00000472119 VN1R5Q7Z5H4 357 aa9.83□□□□□ -0.84
SCN9A-206ENST00000472119 ABTB2Q8N961 1025 aa9.83□□□□□ -0.84
SCN9A-206ENST00000472119 TMEM102Q8N9M5 508 aaPredicted RBP9.83□□□□□ -0.84
SCN9A-206ENST00000472119 SLC38A3Q99624 504 aa9.83□□□□□ -0.84
SCN9A-206ENST00000472119 A2ML1A8K2U0 1454 aa9.83□□□□□ -0.84
SCN9A-206ENST00000472119 PREX1Q8TCU6 1659 aa9.83□□□□□ -0.84
SCN9A-206ENST00000472119 MAP7Q14244 749 aa9.82□□□□□ -0.84
SCN9A-206ENST00000472119 SPRED2Q7Z698 418 aa9.82□□□□□ -0.84
SCN9A-206ENST00000472119 THEMISQ8N1K5 641 aaPredicted RBP9.82□□□□□ -0.84
SCN9A-206ENST00000472119 NLRP1Q9C000 1473 aa9.82□□□□□ -0.84
SCN9A-206ENST00000472119 MYO3AQ8NEV4 1616 aa9.82□□□□□ -0.84
SCN9A-206ENST00000472119 SYNMO15061 1565 aa9.81□□□□□ -0.84
SCN9A-206ENST00000472119 UGGT1Q9NYU2 1555 aa9.81□□□□□ -0.84
SCN9A-206ENST00000472119 CEP170BQ9Y4F5 1589 aaPredicted RBP9.81□□□□□ -0.84
SCN9A-206ENST00000472119 PLA2R1Q13018 1463 aa9.81□□□□□ -0.84
SCN9A-206ENST00000472119 STK11IPQ8N1F8 1099 aa9.81□□□□□ -0.84
SCN9A-206ENST00000472119 ACTL7BQ9Y614 415 aa9.81□□□□□ -0.84
SCN9A-206ENST00000472119 PTPRTO14522 1441 aa9.81□□□□□ -0.84
SCN9A-206ENST00000472119 ADH5P11766 374 aa9.8□□□□□ -0.84
SCN9A-206ENST00000472119 GSTM4Q03013 218 aa9.8□□□□□ -0.84
SCN9A-206ENST00000472119 ATG4DQ86TL0 474 aaPredicted RBP9.8□□□□□ -0.84
SCN9A-206ENST00000472119 WFDC3Q8IUB2 231 aa9.8□□□□□ -0.84
SCN9A-206ENST00000472119 NXPE3Q969Y0 559 aa9.8□□□□□ -0.84
SCN9A-206ENST00000472119 OSMRQ99650 979 aa9.8□□□□□ -0.84
SCN9A-206ENST00000472119 RC3H2Q9HBD1 1191 aaKnown RBP9.8□□□□□ -0.84
SCN9A-206ENST00000472119 ZNF865P0CJ78 1059 aaPredicted RBP9.79□□□□□ -0.84
SCN9A-206ENST00000472119 ANKLE2Q86XL3 938 aa9.79□□□□□ -0.84
SCN9A-206ENST00000472119 ASAP3Q8TDY4 903 aa9.79□□□□□ -0.84
SCN9A-206ENST00000472119 SOX17Q9H6I2 414 aaPredicted RBP9.79□□□□□ -0.84
SCN9A-206ENST00000472119 LTKP29376 864 aa9.78□□□□□ -0.84
SCN9A-206ENST00000472119 BNIP3Q12983 259 aa9.78□□□□□ -0.84
SCN9A-206ENST00000472119 CFAP70Q5T0N1 1121 aa9.78□□□□□ -0.84
SCN9A-206ENST00000472119 TXNDC2Q86VQ3 553 aa9.78□□□□□ -0.84
SCN9A-206ENST00000472119 ATCAYQ86WG3 371 aa9.78□□□□□ -0.84
SCN9A-206ENST00000472119 SEMA6CQ9H3T2 930 aa9.78□□□□□ -0.84
SCN9A-206ENST00000472119 PIK3C2BO00750 1634 aa9.78□□□□□ -0.84
SCN9A-206ENST00000472119 ZNF326Q5BKZ1 582 aaKnown RBP9.77□□□□□ -0.85
SCN9A-206ENST00000472119 GLIS3Q8NEA6 775 aa9.77□□□□□ -0.85
SCN9A-206ENST00000472119 TMEM40Q8WWA1 233 aa9.77□□□□□ -0.85
SCN9A-206ENST00000472119 ZKSCAN3Q9BRR0 538 aa9.77□□□□□ -0.85
SCN9A-206ENST00000472119 CXXC1Q9P0U4 656 aaPredicted RBP9.77□□□□□ -0.85
SCN9A-206ENST00000472119 ANKRD30BQ9BXX2 1392 aa9.76□□□□□ -0.85
SCN9A-206ENST00000472119 ESRRAP11474 423 aaPredicted RBP9.76□□□□□ -0.85
SCN9A-206ENST00000472119 RGL3Q3MIN7 710 aa9.76□□□□□ -0.85
SCN9A-206ENST00000472119 DYMQ7RTS9 669 aa9.76□□□□□ -0.85
SCN9A-206ENST00000472119 EID1Q9Y6B2 187 aa9.76□□□□□ -0.85
SCN9A-206ENST00000472119 ZNF142P52746 1687 aaPredicted RBP9.76□□□□□ -0.85
SCN9A-206ENST00000472119 TRPM2O94759 1503 aa9.76□□□□□ -0.85
SCN9A-206ENST00000472119 SPHKAPQ2M3C7 1700 aa9.76□□□□□ -0.85
SCN9A-206ENST00000472119 TMEM2Q9UHN6 1383 aa9.75□□□□□ -0.85
SCN9A-206ENST00000472119 CCDC144AA2RUR9 1427 aa9.75□□□□□ -0.85
SCN9A-206ENST00000472119 A6NHS1 94 aa9.75□□□□□ -0.85
SCN9A-206ENST00000472119 KRTAP19-4Q3LI73 84 aa9.75□□□□□ -0.85
SCN9A-206ENST00000472119 CHRDQ9H2X0 955 aa9.75□□□□□ -0.85
SCN9A-206ENST00000472119 UBR1Q8IWV7 1749 aa9.75□□□□□ -0.85
SCN9A-206ENST00000472119 CLTCL1P53675 1640 aa9.74□□□□□ -0.85
SCN9A-206ENST00000472119 ADGRB3O60242 1522 aa9.74□□□□□ -0.85
SCN9A-206ENST00000472119 RPLP1P05386 114 aaKnown RBP9.74□□□□□ -0.85
SCN9A-206ENST00000472119 RNASE1P07998 156 aaKnown RBP9.74□□□□□ -0.85
SCN9A-206ENST00000472119 C8orf34Q49A92 452 aa9.74□□□□□ -0.85
SCN9A-206ENST00000472119 EDEM1Q92611 657 aa9.74□□□□□ -0.85
SCN9A-206ENST00000472119 PMEPA1Q969W9 287 aa9.74□□□□□ -0.85
SCN9A-206ENST00000472119 MISP3Q96FF7 219 aa9.74□□□□□ -0.85
SCN9A-206ENST00000472119 DHX57Q6P158 1386 aaKnown RBP9.74□□□□□ -0.85
SCN9A-206ENST00000472119 RIMS2Q9UQ26 1411 aa9.73□□□□□ -0.85
SCN9A-206ENST00000472119 PPP1R15AO75807 674 aaPredicted RBP9.73□□□□□ -0.85
SCN9A-206ENST00000472119 CD8BP10966 210 aa9.73□□□□□ -0.85
SCN9A-206ENST00000472119 FUT4P22083 530 aa9.73□□□□□ -0.85
SCN9A-206ENST00000472119 AKAP4Q5JQC9 854 aa9.73□□□□□ -0.85
SCN9A-206ENST00000472119 XKR5Q6UX68 686 aa9.73□□□□□ -0.85
SCN9A-206ENST00000472119 TTC16Q8NEE8 873 aa9.73□□□□□ -0.85
SCN9A-206ENST00000472119 LGR6Q9HBX8 967 aa9.73□□□□□ -0.85
SCN9A-206ENST00000472119 MBNL3Q9NUK0 354 aaKnown RBP9.73□□□□□ -0.85
SCN9A-206ENST00000472119 FAM105AQ9NUU6 356 aa9.73□□□□□ -0.85
SCN9A-206ENST00000472119 ZMIZ1Q9ULJ6 1067 aa9.73□□□□□ -0.85
SCN9A-206ENST00000472119 TMEM131LA2VDJ0 1609 aa9.73□□□□□ -0.85
SCN9A-206ENST00000472119 STRCQ7RTU9 1775 aa9.73□□□□□ -0.85
SCN9A-206ENST00000472119 ARHGAP23Q9P227 1491 aa9.72□□□□□ -0.85
SCN9A-206ENST00000472119 DNM1Q05193 864 aaKnown RBP9.72□□□□□ -0.85
SCN9A-206ENST00000472119 LCE5AQ5TCM9 118 aa9.72□□□□□ -0.85
SCN9A-206ENST00000472119 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.72□□□□□ -0.85
SCN9A-206ENST00000472119 FAM84AQ96KN4 292 aa9.72□□□□□ -0.85
SCN9A-206ENST00000472119 SIN3AQ96ST3 1273 aa9.72□□□□□ -0.85
SCN9A-206ENST00000472119 ACSS3Q9H6R3 686 aa9.72□□□□□ -0.85
SCN9A-206ENST00000472119 ADAMTS6Q9UKP5 1117 aa9.72□□□□□ -0.85
SCN9A-206ENST00000472119 AP4E1Q9UPM8 1137 aa9.72□□□□□ -0.85
SCN9A-206ENST00000472119 SCAF11Q99590 1463 aaKnown RBP9.72□□□□□ -0.85
SCN9A-206ENST00000472119 SLIT1O75093 1534 aa9.72□□□□□ -0.85
SCN9A-206ENST00000472119 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9.71□□□□□ -0.86
SCN9A-206ENST00000472119 PCSK2P16519 638 aa9.71□□□□□ -0.86
SCN9A-206ENST00000472119 OGFOD3Q6PK18 319 aa9.71□□□□□ -0.86
SCN9A-206ENST00000472119 LRRN4CLQ8ND94 238 aa9.71□□□□□ -0.86
SCN9A-206ENST00000472119 STK32AQ8WU08 396 aa9.71□□□□□ -0.86
SCN9A-206ENST00000472119 GGNBP2Q9H3C7 697 aa9.71□□□□□ -0.86
SCN9A-206ENST00000472119 C1GALT1Q9NS00 363 aa9.71□□□□□ -0.86
SCN9A-206ENST00000472119 RAD18Q9NS91 495 aa9.71□□□□□ -0.86
SCN9A-206ENST00000472119 DAGLAQ9Y4D2 1042 aa9.71□□□□□ -0.86
SCN9A-206ENST00000472119 NPHP4O75161 1426 aaPredicted RBP9.71□□□□□ -0.86
SCN9A-206ENST00000472119 ZFYVE9O95405 1425 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms