RNA–Protein interactions for RNA: ENST00000471996.1

SORT1-203, Transcript of sortilin 1, humanhuman

TSL 3

Gene SORT1, Length 469 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-203ENST00000471996 DOCK1Q14185 1865 aa23.7■■□□□ 1.38
SORT1-203ENST00000471996 COL6A1P12109 1028 aa23.69■■□□□ 1.38
SORT1-203ENST00000471996 PRKAR2AP13861 404 aaKnown RBP23.69■■□□□ 1.38
SORT1-203ENST00000471996 HMGCS2P54868 508 aa23.69■■□□□ 1.38
SORT1-203ENST00000471996 DZIP1Q86YF9 867 aaKnown RBP23.69■■□□□ 1.38
SORT1-203ENST00000471996 SLF2Q8IX21 1173 aa23.69■■□□□ 1.38
SORT1-203ENST00000471996 GUCD1Q96NT3 240 aa23.69■■□□□ 1.38
SORT1-203ENST00000471996 TBC1D2Q9BYX2 928 aa23.69■■□□□ 1.38
SORT1-203ENST00000471996 OSBPL5Q9H0X9 879 aaPredicted RBP23.69■■□□□ 1.38
SORT1-203ENST00000471996 CEP126Q9P2H0 1117 aa23.69■■□□□ 1.38
SORT1-203ENST00000471996 MORF4L1Q9UBU8 362 aa23.69■■□□□ 1.38
SORT1-203ENST00000471996 CYP2B6P20813 491 aa23.68■■□□□ 1.38
SORT1-203ENST00000471996 BTDP43251 543 aa23.68■■□□□ 1.38
SORT1-203ENST00000471996 XPO5Q9HAV4 1204 aaKnown RBP eCLIP23.68■■□□□ 1.384e-7■■□□□ 11.5
SORT1-203ENST00000471996 FBXO3Q9UK99 471 aa23.68■■□□□ 1.38
SORT1-203ENST00000471996 MDM2Q00987 491 aaPredicted RBP23.67■■□□□ 1.38
SORT1-203ENST00000471996 VCANP13611 3396 aa23.66■■□□□ 1.38
SORT1-203ENST00000471996 FAM196BA6NMK8 535 aa23.66■■□□□ 1.38
SORT1-203ENST00000471996 NPM3O75607 178 aaKnown RBP23.66■■□□□ 1.38
SORT1-203ENST00000471996 CIAO1O76071 339 aa23.66■■□□□ 1.38
SORT1-203ENST00000471996 XRCC5P13010 732 aaKnown RBP23.66■■□□□ 1.38
SORT1-203ENST00000471996 LRRC26Q2I0M4 334 aa23.66■■□□□ 1.38
SORT1-203ENST00000471996 SH3D19Q5HYK7 790 aa23.66■■□□□ 1.38
SORT1-203ENST00000471996 MRPL50Q8N5N7 158 aaKnown RBP23.66■■□□□ 1.38
SORT1-203ENST00000471996 ABCF2Q9UG63 623 aa23.66■■□□□ 1.38
SORT1-203ENST00000471996 PTPRCP08575 1304 aa23.65■■□□□ 1.38
SORT1-203ENST00000471996 RHBDL3P58872 404 aa23.65■■□□□ 1.38
SORT1-203ENST00000471996 CCDC102BQ68D86 513 aa23.65■■□□□ 1.38
SORT1-203ENST00000471996 NUDT12Q9BQG2 462 aa23.65■■□□□ 1.38
SORT1-203ENST00000471996 SIL1Q9H173 461 aa23.65■■□□□ 1.38
SORT1-203ENST00000471996 MROH7-TTC4A0A0A0MT08 1334 aa23.64■■□□□ 1.38
SORT1-203ENST00000471996 CAP2P40123 477 aa23.64■■□□□ 1.37
SORT1-203ENST00000471996 LHX8Q68G74 356 aa23.64■■□□□ 1.37
SORT1-203ENST00000471996 TRMT44Q8IYL2 757 aaKnown RBP23.64■■□□□ 1.37
SORT1-203ENST00000471996 SOCS4Q8WXH5 440 aa23.64■■□□□ 1.37
SORT1-203ENST00000471996 LOC285556D6RIA3 1793 aa23.63■■□□□ 1.37
SORT1-203ENST00000471996 GPR75-ASB3A0A0A6YYF3 556 aa23.63■■□□□ 1.37
SORT1-203ENST00000471996 USP17L5A8MUK1 530 aa23.63■■□□□ 1.37
SORT1-203ENST00000471996 CACNB2Q08289 660 aaPredicted RBP23.63■■□□□ 1.37
SORT1-203ENST00000471996 SPTY2D1Q68D10 685 aaPredicted RBP23.63■■□□□ 1.37
SORT1-203ENST00000471996 COL2A1P02458 1487 aaPredicted RBP23.62■■□□□ 1.37
SORT1-203ENST00000471996 PDS5AQ29RF7 1337 aaKnown RBP23.62■■□□□ 1.37
SORT1-203ENST00000471996 ZKSCAN1P17029 563 aaPredicted RBP23.62■■□□□ 1.37
SORT1-203ENST00000471996 ADORA1P30542 326 aa23.62■■□□□ 1.37
SORT1-203ENST00000471996 RASGRF1Q13972 1273 aa23.62■■□□□ 1.37
SORT1-203ENST00000471996 RRP1BQ14684 758 aaKnown RBP23.62■■□□□ 1.37
SORT1-203ENST00000471996 FAM161BQ96MY7 647 aa23.62■■□□□ 1.37
SORT1-203ENST00000471996 AS3MTQ9HBK9 375 aa23.62■■□□□ 1.37
SORT1-203ENST00000471996 MRS2Q9HD23 443 aa23.62■■□□□ 1.37
SORT1-203ENST00000471996 MYH2Q9UKX2 1941 aa23.62■■□□□ 1.37
SORT1-203ENST00000471996 HOXA7P31268 230 aaPredicted RBP23.61■■□□□ 1.37
SORT1-203ENST00000471996 IL15P40933 162 aaPredicted RBP23.61■■□□□ 1.37
SORT1-203ENST00000471996 IRX3P78415 501 aaPredicted RBP23.61■■□□□ 1.37
SORT1-203ENST00000471996 GPRC5AQ8NFJ5 357 aa23.61■■□□□ 1.37
SORT1-203ENST00000471996 P2RX7Q99572 595 aaKnown RBP23.61■■□□□ 1.37
SORT1-203ENST00000471996 TXNRD2Q9NNW7 524 aa23.61■■□□□ 1.37
SORT1-203ENST00000471996 PLXNB2O15031 1838 aa23.61■■□□□ 1.37
SORT1-203ENST00000471996 PEX10O60683 326 aa23.6■■□□□ 1.37
SORT1-203ENST00000471996 CCND3P30281 292 aaPredicted RBP23.6■■□□□ 1.37
SORT1-203ENST00000471996 MECOMQ03112 1051 aa23.6■■□□□ 1.37
SORT1-203ENST00000471996 USP6NLQ92738 828 aa23.6■■□□□ 1.37
SORT1-203ENST00000471996 SPTBN5Q9NRC6 3674 aaKnown RBP23.59■■□□□ 1.37
SORT1-203ENST00000471996 MAP4K4O95819 1239 aaPredicted RBP23.59■■□□□ 1.37
SORT1-203ENST00000471996 MAPK4P31152 587 aa23.59■■□□□ 1.37
SORT1-203ENST00000471996 PDE3AQ14432 1141 aa23.59■■□□□ 1.37
SORT1-203ENST00000471996 ERICH6Q7L0X2 663 aa23.59■■□□□ 1.37
SORT1-203ENST00000471996 ZNF384Q8TF68 577 aa23.59■■□□□ 1.37
SORT1-203ENST00000471996 LBHD1Q9BQE6 289 aaPredicted RBP23.59■■□□□ 1.37
SORT1-203ENST00000471996 WDR18Q9BV38 432 aa23.59■■□□□ 1.37
SORT1-203ENST00000471996 BACE1P56817 501 aa23.58■■□□□ 1.37
SORT1-203ENST00000471996 HERVK_113P62684 666 aa23.58■■□□□ 1.37
SORT1-203ENST00000471996 MTMR2Q13614 643 aa23.58■■□□□ 1.37
SORT1-203ENST00000471996 ZNF697Q5TEC3 545 aa23.58■■□□□ 1.37
SORT1-203ENST00000471996 TMOD4Q9NZQ9 345 aa23.58■■□□□ 1.37
SORT1-203ENST00000471996 RGS2P41220 211 aa23.57■■□□□ 1.36
SORT1-203ENST00000471996 CCL14Q16627 93 aa23.57■■□□□ 1.36
SORT1-203ENST00000471996 MORN1Q5T089 497 aa23.57■■□□□ 1.36
SORT1-203ENST00000471996 RBPJLQ9UBG7 517 aa23.57■■□□□ 1.36
SORT1-203ENST00000471996 HERC5Q9UII4 1024 aaKnown RBP23.57■■□□□ 1.36
SORT1-203ENST00000471996 TIMM10P62072 90 aa23.56■■□□□ 1.36
SORT1-203ENST00000471996 Q3C1V9 767 aa23.56■■□□□ 1.36
SORT1-203ENST00000471996 PA2G4Q9UQ80 394 aaKnown RBP23.56■■□□□ 1.36
SORT1-203ENST00000471996 LAMA2P24043 3122 aaKnown RBP23.56■■□□□ 1.36
SORT1-203ENST00000471996 LDHCP07864 332 aa23.55■■□□□ 1.36
SORT1-203ENST00000471996 ERVK-9P63128 1117 aa23.55■■□□□ 1.36
SORT1-203ENST00000471996 ERVK-24P63145 666 aa23.55■■□□□ 1.36
SORT1-203ENST00000471996 GPR142Q7Z601 462 aa23.55■■□□□ 1.36
SORT1-203ENST00000471996 SSH1Q8WYL5 1049 aa23.55■■□□□ 1.36
SORT1-203ENST00000471996 CDX2Q99626 313 aaPredicted RBP23.55■■□□□ 1.36
SORT1-203ENST00000471996 APBA2Q99767 749 aa23.55■■□□□ 1.36
SORT1-203ENST00000471996 SENP6Q9GZR1 1112 aaPredicted RBP23.55■■□□□ 1.36
SORT1-203ENST00000471996 PORCNQ9H237 461 aa23.55■■□□□ 1.36
SORT1-203ENST00000471996 PRDM6Q9NQX0 595 aa23.55■■□□□ 1.36
SORT1-203ENST00000471996 EYSQ5T1H1 3165 aa23.54■■□□□ 1.36
SORT1-203ENST00000471996 UBTFL1P0CB47 393 aaPredicted RBP23.54■■□□□ 1.36
SORT1-203ENST00000471996 GSTO1P78417 241 aa23.54■■□□□ 1.36
SORT1-203ENST00000471996 PLEKHH3Q7Z736 793 aa23.54■■□□□ 1.36
SORT1-203ENST00000471996 CCAR1Q8IX12 1150 aaKnown RBP23.54■■□□□ 1.36
SORT1-203ENST00000471996 NSUN4Q96CB9 384 aaKnown RBP23.54■■□□□ 1.36
SORT1-203ENST00000471996 C19orf81C9J6K1 198 aa23.53■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms