RNA–Protein interactions for RNA: ENST00000471494.5

RNF220-208, Transcript of ring finger protein 220, humanhuman

TSL 5

Gene RNF220, Length 720 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-208ENST00000471494 PDHXO00330 501 aa28.49■■■□□ 2.15
RNF220-208ENST00000471494 ARHGEF6Q15052 776 aa28.49■■■□□ 2.15
RNF220-208ENST00000471494 TTF1Q15361 905 aaPredicted RBP28.49■■■□□ 2.15
RNF220-208ENST00000471494 TMED8Q6PL24 325 aaPredicted RBP28.49■■■□□ 2.15
RNF220-208ENST00000471494 CERS3Q8IU89 383 aa28.49■■■□□ 2.15
RNF220-208ENST00000471494 PI4KBQ9UBF8 816 aa28.49■■■□□ 2.15
RNF220-208ENST00000471494 DYNLL1P63167 89 aaKnown RBP28.48■■■□□ 2.15
RNF220-208ENST00000471494 MLLT1Q03111 559 aaPredicted RBP28.48■■■□□ 2.15
RNF220-208ENST00000471494 MOGSQ13724 837 aa28.48■■■□□ 2.15
RNF220-208ENST00000471494 MIGA1Q8NAN2 632 aa28.48■■■□□ 2.15
RNF220-208ENST00000471494 AFG3L2Q9Y4W6 797 aa28.48■■■□□ 2.15
RNF220-208ENST00000471494 ZSWIM8A7E2V4 1837 aa28.48■■■□□ 2.15
RNF220-208ENST00000471494 FASTKD5Q7L8L6 764 aaKnown RBP28.47■■■□□ 2.15
RNF220-208ENST00000471494 PPIL4Q8WUA2 492 aaKnown RBP eCLIP28.47■■■□□ 2.15
RNF220-208ENST00000471494 A0A0G2JLL6 359 aaPredicted RBP28.46■■■□□ 2.15
RNF220-208ENST00000471494 PRRT2Q7Z6L0 340 aaPredicted RBP28.46■■■□□ 2.15
RNF220-208ENST00000471494 DNAJC2Q99543 621 aaKnown RBP28.46■■■□□ 2.15
RNF220-208ENST00000471494 TRIM34Q9BYJ4 488 aa28.46■■■□□ 2.15
RNF220-208ENST00000471494 FRMD4AQ9P2Q2 1039 aaPredicted RBP28.46■■■□□ 2.15
RNF220-208ENST00000471494 TRIM75PA6NK02 468 aa28.45■■■□□ 2.14
RNF220-208ENST00000471494 KIF22Q14807 665 aa28.45■■■□□ 2.14
RNF220-208ENST00000471494 GADL1Q6ZQY3 521 aa28.45■■■□□ 2.14
RNF220-208ENST00000471494 PARK7Q99497 189 aaKnown RBP28.45■■■□□ 2.14
RNF220-208ENST00000471494 PTPN22Q9Y2R2 807 aa28.45■■■□□ 2.14
RNF220-208ENST00000471494 MYH7P12883 1935 aa28.44■■■□□ 2.14
RNF220-208ENST00000471494 CAP1Q01518 475 aa28.44■■■□□ 2.14
RNF220-208ENST00000471494 CCDC84Q86UT8 332 aaPredicted RBP28.44■■■□□ 2.14
RNF220-208ENST00000471494 CRACR2BQ8N4Y2 399 aaPredicted RBP28.44■■■□□ 2.14
RNF220-208ENST00000471494 LRRCC1Q9C099 1032 aa28.44■■■□□ 2.14
RNF220-208ENST00000471494 SAP30BPQ9UHR5 308 aaKnown RBP28.44■■■□□ 2.14
RNF220-208ENST00000471494 PALD1Q9ULE6 856 aa28.44■■■□□ 2.14
RNF220-208ENST00000471494 NAV1Q8NEY1 1877 aa28.44■■■□□ 2.14
RNF220-208ENST00000471494 LOC285556D6RIA3 1793 aa28.43■■■□□ 2.14
RNF220-208ENST00000471494 GOLIM4O00461 696 aa28.43■■■□□ 2.14
RNF220-208ENST00000471494 HLA-DOAP06340 250 aa28.43■■■□□ 2.14
RNF220-208ENST00000471494 CAP2P40123 477 aa28.43■■■□□ 2.14
RNF220-208ENST00000471494 USP5P45974 858 aa28.43■■■□□ 2.14
RNF220-208ENST00000471494 LACTBP83111 547 aaPredicted RBP28.43■■■□□ 2.14
RNF220-208ENST00000471494 GPAT2Q6NUI2 795 aa28.43■■■□□ 2.14
RNF220-208ENST00000471494 CPA4Q9UI42 421 aa28.43■■■□□ 2.14
RNF220-208ENST00000471494 C17orf99Q6UX52 265 aa28.42■■■□□ 2.14
RNF220-208ENST00000471494 HTTP42858 3142 aa28.42■■■□□ 2.14
RNF220-208ENST00000471494 ADGRA2Q96PE1 1338 aa28.42■■■□□ 2.14
RNF220-208ENST00000471494 PDE6AP16499 860 aa28.41■■■□□ 2.14
RNF220-208ENST00000471494 SLC9C2Q5TAH2 1124 aa28.41■■■□□ 2.14
RNF220-208ENST00000471494 FOXP4Q8IVH2 680 aaPredicted RBP28.41■■■□□ 2.14
RNF220-208ENST00000471494 TBC1D2Q9BYX2 928 aa28.41■■■□□ 2.14
RNF220-208ENST00000471494 ATP5JP18859 108 aa28.4■■■□□ 2.14
RNF220-208ENST00000471494 RRP1BQ14684 758 aaKnown RBP28.4■■■□□ 2.14
RNF220-208ENST00000471494 DDX60LQ5H9U9 1706 aaKnown RBP28.4■■■□□ 2.14
RNF220-208ENST00000471494 MGAMO43451 1857 aa28.4■■■□□ 2.14
RNF220-208ENST00000471494 MAGEB6P1A0A0J9YX57 407 aa28.39■■■□□ 2.14
RNF220-208ENST00000471494 CYP2C8P10632 490 aa28.39■■■□□ 2.14
RNF220-208ENST00000471494 SLC4A8Q2Y0W8 1093 aa28.39■■■□□ 2.14
RNF220-208ENST00000471494 METTL16Q86W50 562 aaKnown RBP28.39■■■□□ 2.14
RNF220-208ENST00000471494 ZNF280CQ8ND82 737 aa28.39■■■□□ 2.14
RNF220-208ENST00000471494 YTHDC1Q96MU7 727 aaKnown RBP28.39■■■□□ 2.14
RNF220-208ENST00000471494 ARHGAP39Q9C0H5 1083 aa28.39■■■□□ 2.14
RNF220-208ENST00000471494 BOLA2Q9H3K6 86 aa28.39■■■□□ 2.14
RNF220-208ENST00000471494 PAG1Q9NWQ8 432 aa28.39■■■□□ 2.14
RNF220-208ENST00000471494 SLC45A1Q9Y2W3 748 aa28.39■■■□□ 2.14
RNF220-208ENST00000471494 USP17L5A8MUK1 530 aa28.38■■■□□ 2.13
RNF220-208ENST00000471494 SPP2Q13103 211 aa28.38■■■□□ 2.13
RNF220-208ENST00000471494 EDC3Q96F86 508 aaKnown RBP28.38■■■□□ 2.13
RNF220-208ENST00000471494 DNAJC18Q9H819 358 aa28.38■■■□□ 2.13
RNF220-208ENST00000471494 AS3MTQ9HBK9 375 aa28.38■■■□□ 2.13
RNF220-208ENST00000471494 SMARCA5O60264 1052 aaPredicted RBP28.37■■■□□ 2.13
RNF220-208ENST00000471494 GNRH1P01148 92 aa28.37■■■□□ 2.13
RNF220-208ENST00000471494 ASNSP08243 561 aa28.37■■■□□ 2.13
RNF220-208ENST00000471494 RRP1P56182 461 aaKnown RBP28.37■■■□□ 2.13
RNF220-208ENST00000471494 RIOK1Q9BRS2 568 aaKnown RBP28.37■■■□□ 2.13
RNF220-208ENST00000471494 AGTPBP1Q9UPW5 1226 aa28.37■■■□□ 2.13
RNF220-208ENST00000471494 ZNF532Q9HCE3 1301 aa28.37■■■□□ 2.13
RNF220-208ENST00000471494 ECM2O94769 699 aaPredicted RBP28.36■■■□□ 2.13
RNF220-208ENST00000471494 PROCA1Q8NCQ7 364 aaPredicted RBP28.36■■■□□ 2.13
RNF220-208ENST00000471494 PTCH2Q9Y6C5 1203 aa28.36■■■□□ 2.13
RNF220-208ENST00000471494 RBBP6Q7Z6E9 1792 aaKnown RBP28.36■■■□□ 2.13
RNF220-208ENST00000471494 KIAA0100Q14667 2235 aaKnown RBP28.35■■■□□ 2.13
RNF220-208ENST00000471494 SMCR8Q8TEV9 937 aaPredicted RBP28.35■■■□□ 2.13
RNF220-208ENST00000471494 HAUS7Q99871 368 aa28.35■■■□□ 2.13
RNF220-208ENST00000471494 CRNKL1Q9BZJ0 848 aaKnown RBP28.35■■■□□ 2.13
RNF220-208ENST00000471494 DCTPP1Q9H773 170 aa28.35■■■□□ 2.13
RNF220-208ENST00000471494 PDE4DIPQ5VU43 2346 aa28.35■■■□□ 2.13
RNF220-208ENST00000471494 GDF11O95390 407 aa28.34■■■□□ 2.13
RNF220-208ENST00000471494 TTC6Q86TZ1 520 aa28.34■■■□□ 2.13
RNF220-208ENST00000471494 ARMC5Q96C12 935 aa28.34■■■□□ 2.13
RNF220-208ENST00000471494 DDX24Q9GZR7 859 aaKnown RBP eCLIP28.34■■■□□ 2.13
RNF220-208ENST00000471494 GINM1Q9NU53 330 aa28.34■■■□□ 2.13
RNF220-208ENST00000471494 PNMA3Q9UL41 463 aa28.34■■■□□ 2.13
RNF220-208ENST00000471494 TCRBV5S4A2TA0A5A2 114 aa28.33■■■□□ 2.13
RNF220-208ENST00000471494 BCRP11274 1271 aa28.33■■■□□ 2.13
RNF220-208ENST00000471494 PSMC4P43686 418 aa28.33■■■□□ 2.13
RNF220-208ENST00000471494 HMGCS2P54868 508 aa28.33■■■□□ 2.13
RNF220-208ENST00000471494 SLC9C1Q4G0N8 1177 aa28.33■■■□□ 2.13
RNF220-208ENST00000471494 EHD4Q9H223 541 aa28.33■■■□□ 2.13
RNF220-208ENST00000471494 SERPINB13Q9UIV8 391 aa28.33■■■□□ 2.13
RNF220-208ENST00000471494 ZBTB21Q9ULJ3 1066 aa28.33■■■□□ 2.13
RNF220-208ENST00000471494 MYH8P13535 1937 aa28.32■■■□□ 2.12
RNF220-208ENST00000471494 PRMT2P55345 433 aa28.32■■■□□ 2.12
RNF220-208ENST00000471494 TREML2Q5T2D2 321 aa28.32■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms