RNA–Protein interactions for RNA: ENST00000471455.1

CPSF4-211, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 569 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-211ENST00000471455 EPAS1Q99814 870 aa11.37□□□□□ -0.59
CPSF4-211ENST00000471455 SRRDQ9UH36 339 aa11.37□□□□□ -0.59
CPSF4-211ENST00000471455 KCNH4Q9UQ05 1017 aa11.37□□□□□ -0.59
CPSF4-211ENST00000471455 E9PSI1 815 aa11.36□□□□□ -0.59
CPSF4-211ENST00000471455 TK2O00142 265 aa11.36□□□□□ -0.59
CPSF4-211ENST00000471455 PDHXO00330 501 aa11.36□□□□□ -0.59
CPSF4-211ENST00000471455 FMNL1O95466 1100 aaPredicted RBP11.36□□□□□ -0.59
CPSF4-211ENST00000471455 MYCP01106 439 aaPredicted RBP11.36□□□□□ -0.59
CPSF4-211ENST00000471455 LDHBP07195 334 aaKnown RBP11.36□□□□□ -0.59
CPSF4-211ENST00000471455 PTPREP23469 700 aa11.36□□□□□ -0.59
CPSF4-211ENST00000471455 PSMC4P43686 418 aa11.36□□□□□ -0.59
CPSF4-211ENST00000471455 FXR1P51114 621 aaKnown RBP eCLIP11.36□□□□□ -0.59
CPSF4-211ENST00000471455 FCGRTP55899 365 aa11.36□□□□□ -0.59
CPSF4-211ENST00000471455 UBXN2AP68543 259 aa11.36□□□□□ -0.59
CPSF4-211ENST00000471455 C17orf99Q6UX52 265 aa11.36□□□□□ -0.59
CPSF4-211ENST00000471455 MIGA2Q7L4E1 593 aa11.36□□□□□ -0.59
CPSF4-211ENST00000471455 ZGPATQ8N5A5 531 aaKnown RBP11.36□□□□□ -0.59
CPSF4-211ENST00000471455 MRPL50Q8N5N7 158 aaKnown RBP11.36□□□□□ -0.59
CPSF4-211ENST00000471455 TRIM47Q96LD4 638 aa11.36□□□□□ -0.59
CPSF4-211ENST00000471455 ZBED2Q9BTP6 218 aa11.36□□□□□ -0.59
CPSF4-211ENST00000471455 HTATIP2Q9BUP3 242 aa11.36□□□□□ -0.59
CPSF4-211ENST00000471455 ARHGAP39Q9C0H5 1083 aa11.36□□□□□ -0.59
CPSF4-211ENST00000471455 ZNF112Q9UJU3 913 aa11.36□□□□□ -0.59
CPSF4-211ENST00000471455 TRIOBPQ9H2D6 2365 aa11.36□□□□□ -0.59
CPSF4-211ENST00000471455 MYPNQ86TC9 1320 aa11.35□□□□□ -0.59
CPSF4-211ENST00000471455 CXCL11O14625 94 aa11.35□□□□□ -0.59
CPSF4-211ENST00000471455 CIAO1O76071 339 aa11.35□□□□□ -0.59
CPSF4-211ENST00000471455 CAPN2P17655 700 aa11.35□□□□□ -0.59
CPSF4-211ENST00000471455 INPP5BP32019 993 aa11.35□□□□□ -0.59
CPSF4-211ENST00000471455 GRK4P32298 578 aa11.35□□□□□ -0.59
CPSF4-211ENST00000471455 NBR1Q14596 966 aa11.35□□□□□ -0.59
CPSF4-211ENST00000471455 ATP2B3Q16720 1220 aa11.35□□□□□ -0.59
CPSF4-211ENST00000471455 FASTKD5Q7L8L6 764 aaKnown RBP11.35□□□□□ -0.59
CPSF4-211ENST00000471455 SLF2Q8IX21 1173 aa11.35□□□□□ -0.59
CPSF4-211ENST00000471455 KLHDC4Q8TBB5 520 aa11.35□□□□□ -0.59
CPSF4-211ENST00000471455 USP44Q9H0E7 712 aa11.35□□□□□ -0.59
CPSF4-211ENST00000471455 PICK1Q9NRD5 415 aa11.35□□□□□ -0.59
CPSF4-211ENST00000471455 CEP126Q9P2H0 1117 aa11.35□□□□□ -0.59
CPSF4-211ENST00000471455 CPA4Q9UI42 421 aa11.35□□□□□ -0.59
CPSF4-211ENST00000471455 DENND2AQ9ULE3 1009 aa11.35□□□□□ -0.59
CPSF4-211ENST00000471455 DAGLAQ9Y4D2 1042 aa11.35□□□□□ -0.59
CPSF4-211ENST00000471455 AK9Q5TCS8 1911 aa11.35□□□□□ -0.59
CPSF4-211ENST00000471455 SALL1Q9NSC2 1324 aa11.35□□□□□ -0.59
CPSF4-211ENST00000471455 OSBPP22059 807 aa11.34□□□□□ -0.59
CPSF4-211ENST00000471455 MLLT3P42568 568 aaPredicted RBP11.34□□□□□ -0.59
CPSF4-211ENST00000471455 TCP10Q12799 353 aa11.34□□□□□ -0.59
CPSF4-211ENST00000471455 CDC42EP5Q6NZY7 148 aa11.34□□□□□ -0.59
CPSF4-211ENST00000471455 SLC4A5Q9BY07 1137 aa11.34□□□□□ -0.59
CPSF4-211ENST00000471455 USP40Q9NVE5 1235 aa11.34□□□□□ -0.59
CPSF4-211ENST00000471455 BIN2Q9UBW5 565 aaPredicted RBP11.34□□□□□ -0.59
CPSF4-211ENST00000471455 VPS9D1Q9Y2B5 631 aa11.34□□□□□ -0.59
CPSF4-211ENST00000471455 ZNF521Q96K83 1311 aa11.34□□□□□ -0.59
CPSF4-211ENST00000471455 ADGRA2Q96PE1 1338 aa11.34□□□□□ -0.59
CPSF4-211ENST00000471455 PPP1R3GB7ZBB8 358 aa11.33□□□□□ -0.6
CPSF4-211ENST00000471455 H0YGN5 161 aa11.33□□□□□ -0.6
CPSF4-211ENST00000471455 ENTPD3O75355 529 aa11.33□□□□□ -0.6
CPSF4-211ENST00000471455 GJB1P08034 283 aa11.33□□□□□ -0.6
CPSF4-211ENST00000471455 UBTFL1P0CB47 393 aaPredicted RBP11.33□□□□□ -0.6
CPSF4-211ENST00000471455 IL15P40933 162 aaPredicted RBP11.33□□□□□ -0.6
CPSF4-211ENST00000471455 DIXDC1Q155Q3 683 aa11.33□□□□□ -0.6
CPSF4-211ENST00000471455 TSR1Q2NL82 804 aaKnown RBP11.33□□□□□ -0.6
CPSF4-211ENST00000471455 ALDH1L2Q3SY69 923 aa11.33□□□□□ -0.6
CPSF4-211ENST00000471455 DZIP1Q86YF9 867 aaKnown RBP11.33□□□□□ -0.6
CPSF4-211ENST00000471455 SCYL3Q8IZE3 742 aa11.33□□□□□ -0.6
CPSF4-211ENST00000471455 SSH1Q8WYL5 1049 aa11.33□□□□□ -0.6
CPSF4-211ENST00000471455 DPF3Q92784 378 aa11.33□□□□□ -0.6
CPSF4-211ENST00000471455 SLC45A1Q9Y2W3 748 aa11.33□□□□□ -0.6
CPSF4-211ENST00000471455 NR2E3Q9Y5X4 410 aa11.33□□□□□ -0.6
CPSF4-211ENST00000471455 LRRFIP2Q9Y608 721 aaKnown RBP11.33□□□□□ -0.6
CPSF4-211ENST00000471455 CCL5P13501 91 aa11.32□□□□□ -0.6
CPSF4-211ENST00000471455 PRDX5P30044 214 aa11.32□□□□□ -0.6
CPSF4-211ENST00000471455 GJA8P48165 433 aa11.32□□□□□ -0.6
CPSF4-211ENST00000471455 RFX5P48382 616 aaPredicted RBP11.32□□□□□ -0.6
CPSF4-211ENST00000471455 NFIAQ12857 509 aa11.32□□□□□ -0.6
CPSF4-211ENST00000471455 C6orf132Q5T0Z8 1188 aa11.32□□□□□ -0.6
CPSF4-211ENST00000471455 SPTY2D1Q68D10 685 aaPredicted RBP11.32□□□□□ -0.6
CPSF4-211ENST00000471455 ZSCAN29Q8IWY8 852 aaPredicted RBP11.32□□□□□ -0.6
CPSF4-211ENST00000471455 SMCR8Q8TEV9 937 aaPredicted RBP11.32□□□□□ -0.6
CPSF4-211ENST00000471455 IDI2Q9BXS1 227 aa11.32□□□□□ -0.6
CPSF4-211ENST00000471455 RNF208Q9H0X6 261 aa11.32□□□□□ -0.6
CPSF4-211ENST00000471455 SMC4Q9NTJ3 1288 aa11.32□□□□□ -0.6
CPSF4-211ENST00000471455 ZSWIM8A7E2V4 1837 aa11.32□□□□□ -0.6
CPSF4-211ENST00000471455 DOCK2Q92608 1830 aa11.32□□□□□ -0.6
CPSF4-211ENST00000471455 PDS5AQ29RF7 1337 aaKnown RBP11.32□□□□□ -0.6
CPSF4-211ENST00000471455 A0A0G2JLL6 359 aaPredicted RBP11.31□□□□□ -0.6
CPSF4-211ENST00000471455 GRXCR2A6NFK2 248 aa11.31□□□□□ -0.6
CPSF4-211ENST00000471455 BCRP11274 1271 aa11.31□□□□□ -0.6
CPSF4-211ENST00000471455 PRKCZQ05513 592 aa11.31□□□□□ -0.6
CPSF4-211ENST00000471455 MTFR1Q15390 333 aa11.31□□□□□ -0.6
CPSF4-211ENST00000471455 ATG9AQ7Z3C6 839 aa11.31□□□□□ -0.6
CPSF4-211ENST00000471455 PRRT2Q7Z6L0 340 aaPredicted RBP11.31□□□□□ -0.6
CPSF4-211ENST00000471455 SHISA4Q96DD7 197 aa11.31□□□□□ -0.6
CPSF4-211ENST00000471455 SIL1Q9H173 461 aa11.31□□□□□ -0.6
CPSF4-211ENST00000471455 FAM198AQ9UFP1 575 aa11.31□□□□□ -0.6
CPSF4-211ENST00000471455 PNMA3Q9UL41 463 aa11.31□□□□□ -0.6
CPSF4-211ENST00000471455 ZHX2Q9Y6X8 837 aa11.31□□□□□ -0.6
CPSF4-211ENST00000471455 MKI67P46013 3256 aaKnown RBP11.31□□□□□ -0.6
CPSF4-211ENST00000471455 CENPFP49454 3210 aa11.3□□□□□ -0.6
CPSF4-211ENST00000471455 TNPO2O14787 897 aaKnown RBP11.3□□□□□ -0.6
CPSF4-211ENST00000471455 FARP2O94887 1054 aaPredicted RBP11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms