RNA–Protein interactions for RNA: ENST00000471423.1

VPS72-204, Transcript of vacuolar protein sorting 72 homolog, humanhuman

TSL 2

Gene VPS72, Length 568 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS72-204ENST00000471423 SLC4A4Q9Y6R1 1079 aa21.32■■□□□ 1
VPS72-204ENST00000471423 PHF20L1A8MW92 1017 aa21.31■■□□□ 1
VPS72-204ENST00000471423 GPAA1O43292 621 aa21.31■■□□□ 1
VPS72-204ENST00000471423 TBC1D12O60347 775 aa21.31■■□□□ 1
VPS72-204ENST00000471423 KIF23Q02241 960 aaPredicted RBP21.31■■□□□ 1
VPS72-204ENST00000471423 TTC22Q5TAA0 569 aa21.31■■□□□ 1
VPS72-204ENST00000471423 SPRYD7Q5W111 196 aa21.31■■□□□ 1
VPS72-204ENST00000471423 CNKSR2Q8WXI2 1034 aa21.31■■□□□ 1
VPS72-204ENST00000471423 MCM9Q9NXL9 1143 aa21.31■■□□□ 1
VPS72-204ENST00000471423 HERC5Q9UII4 1024 aaKnown RBP21.31■■□□□ 1
VPS72-204ENST00000471423 GSPT1P15170 499 aaKnown RBP21.3■■□□□ 1
VPS72-204ENST00000471423 GJA5P36382 358 aa21.3■■□□□ 1
VPS72-204ENST00000471423 CRACR2BQ8N4Y2 399 aaPredicted RBP21.3■■□□□ 1
VPS72-204ENST00000471423 OPTNQ96CV9 577 aa21.3■■□□□ 1
VPS72-204ENST00000471423 TRIM34Q9BYJ4 488 aa21.3■■□□□ 1
VPS72-204ENST00000471423 DNAJC18Q9H819 358 aa21.3■■□□□ 1
VPS72-204ENST00000471423 ATP8A2Q9NTI2 1148 aa21.3■■□□□ 1
VPS72-204ENST00000471423 POLR3DP05423 398 aaPredicted RBP21.29■■□□□ 1
VPS72-204ENST00000471423 ZBTB48P10074 688 aaPredicted RBP21.29■■□□□ 1
VPS72-204ENST00000471423 NOL9Q5SY16 702 aaKnown RBP21.29■■□□□ 1
VPS72-204ENST00000471423 SKAP1Q86WV1 359 aa21.29■■□□□ 1
VPS72-204ENST00000471423 OTUD5Q96G74 571 aa21.29■■□□□ 1
VPS72-204ENST00000471423 BAZ2AQ9UIF9 1905 aaKnown RBP21.29■■□□□ 1
VPS72-204ENST00000471423 DOCK1Q14185 1865 aa21.28■■□□□ 1
VPS72-204ENST00000471423 SPDYE5A6NIY4 337 aa21.28■■□□□ 1
VPS72-204ENST00000471423 PLCD1P51178 756 aa21.28■■□□□ 1
VPS72-204ENST00000471423 MAP2K1Q02750 393 aaPredicted RBP21.28■■□□□ 1
VPS72-204ENST00000471423 EVX2Q03828 476 aa21.28■■□□□ 1
VPS72-204ENST00000471423 TTC6Q86TZ1 520 aa21.28■■□□□ 1
VPS72-204ENST00000471423 METTL16Q86W50 562 aaKnown RBP21.28■■□□□ 1
VPS72-204ENST00000471423 FOXP4Q8IVH2 680 aaPredicted RBP21.28■■□□□ 1
VPS72-204ENST00000471423 FAM227BQ96M60 508 aa21.28■■□□□ 1
VPS72-204ENST00000471423 A0A0D9SFI3 127 aa21.27■■□□□ 1
VPS72-204ENST00000471423 HSPA1AP0DMV8 641 aaKnown RBP21.27■■□□□ 1
VPS72-204ENST00000471423 HSPA1BP0DMV9 641 aaKnown RBP21.27■■□□□ 1
VPS72-204ENST00000471423 CYP2D6P10635 497 aa21.27■■□□□ 1
VPS72-204ENST00000471423 NMIQ13287 307 aaPredicted RBP21.27■■□□□ 1
VPS72-204ENST00000471423 ERICH6BQ5W0A0 696 aa21.27■■□□□ 1
VPS72-204ENST00000471423 CCDC129Q6ZRS4 1044 aa21.27■■□□□ 1
VPS72-204ENST00000471423 TICAM2Q86XR7 235 aa21.27■■□□□ 1
VPS72-204ENST00000471423 ERO1BQ86YB8 467 aa21.27■■□□□ 1
VPS72-204ENST00000471423 SCYL3Q8IZE3 742 aa21.27■■□□□ 1
VPS72-204ENST00000471423 DDRGK1Q96HY6 314 aa21.27■■□□□ 1
VPS72-204ENST00000471423 EHD4Q9H223 541 aa21.27■■□□□ 1
VPS72-204ENST00000471423 WBP1LQ9NX94 342 aa21.27■■□□□ 1
VPS72-204ENST00000471423 SERPINB13Q9UIV8 391 aa21.27■■□□□ 1
VPS72-204ENST00000471423 LAMB1P07942 1786 aa21.27■■□□□ 1
VPS72-204ENST00000471423 GSG1L2A8MUP6 293 aa21.26■□□□□ 0.99
VPS72-204ENST00000471423 CTNND1O60716 968 aaKnown RBP21.26■□□□□ 0.99
VPS72-204ENST00000471423 GNAT2P19087 354 aa21.26■□□□□ 0.99
VPS72-204ENST00000471423 SDSP20132 328 aa21.26■□□□□ 0.99
VPS72-204ENST00000471423 RRP1BQ14684 758 aaKnown RBP21.26■□□□□ 0.99
VPS72-204ENST00000471423 EPB41L4AQ9HCS5 686 aaPredicted RBP21.26■□□□□ 0.99
VPS72-204ENST00000471423 HELLSQ9NRZ9 838 aa21.26■□□□□ 0.99
VPS72-204ENST00000471423 ATAD5Q96QE3 1844 aa21.25■□□□□ 0.99
VPS72-204ENST00000471423 PICK1Q9NRD5 415 aa21.25■□□□□ 0.99
VPS72-204ENST00000471423 PPP4R2Q9NY27 417 aa21.25■□□□□ 0.99
VPS72-204ENST00000471423 FRMD4AQ9P2Q2 1039 aaPredicted RBP21.25■□□□□ 0.99
VPS72-204ENST00000471423 CYP2D7A0A087X1C5 515 aa21.24■□□□□ 0.99
VPS72-204ENST00000471423 USP17L12C9JPN9 530 aa21.24■□□□□ 0.99
VPS72-204ENST00000471423 USP17L21D6R901 530 aa21.24■□□□□ 0.99
VPS72-204ENST00000471423 APPP05067 770 aa21.24■□□□□ 0.99
VPS72-204ENST00000471423 PPIL2Q13356 520 aa21.24■□□□□ 0.99
VPS72-204ENST00000471423 CTR9Q6PD62 1173 aa21.24■□□□□ 0.99
VPS72-204ENST00000471423 AMOTL1Q8IY63 956 aa21.24■□□□□ 0.99
VPS72-204ENST00000471423 MANSC4A6NHS7 340 aaPredicted RBP21.23■□□□□ 0.99
VPS72-204ENST00000471423 IRF6O14896 467 aa21.23■□□□□ 0.99
VPS72-204ENST00000471423 PTPRAP18433 802 aa21.23■□□□□ 0.99
VPS72-204ENST00000471423 CAP2P40123 477 aa21.23■□□□□ 0.99
VPS72-204ENST00000471423 PPATQ06203 517 aa21.23■□□□□ 0.99
VPS72-204ENST00000471423 GABPAQ06546 454 aa21.23■□□□□ 0.99
VPS72-204ENST00000471423 SREBF2Q12772 1141 aa21.23■□□□□ 0.99
VPS72-204ENST00000471423 MCMDC2Q4G0Z9 681 aa21.23■□□□□ 0.99
VPS72-204ENST00000471423 GIMAP6Q6P9H5 292 aa21.23■□□□□ 0.99
VPS72-204ENST00000471423 BEGAINQ9BUH8 593 aa21.23■□□□□ 0.99
VPS72-204ENST00000471423 DIAPH3Q9NSV4 1193 aa21.23■□□□□ 0.99
VPS72-204ENST00000471423 ARPP21Q9UBL0 812 aaPredicted RBP21.23■□□□□ 0.99
VPS72-204ENST00000471423 PATL2C9JE40 543 aaKnown RBP21.22■□□□□ 0.99
VPS72-204ENST00000471423 SMIM22K7EJ46 135 aa21.22■□□□□ 0.99
VPS72-204ENST00000471423 GDF11O95390 407 aa21.22■□□□□ 0.99
VPS72-204ENST00000471423 SHMT1P34896 483 aa21.22■□□□□ 0.99
VPS72-204ENST00000471423 TDO2P48775 406 aa21.22■□□□□ 0.99
VPS72-204ENST00000471423 SHROOM1Q2M3G4 852 aaPredicted RBP21.22■□□□□ 0.99
VPS72-204ENST00000471423 C12orf60Q5U649 245 aa21.22■□□□□ 0.99
VPS72-204ENST00000471423 ZNF589Q86UQ0 364 aaPredicted RBP21.22■□□□□ 0.99
VPS72-204ENST00000471423 CCDC84Q86UT8 332 aaPredicted RBP21.22■□□□□ 0.99
VPS72-204ENST00000471423 REM2Q8IYK8 340 aaPredicted RBP21.22■□□□□ 0.99
VPS72-204ENST00000471423 DYNLL2Q96FJ2 89 aa21.22■□□□□ 0.99
VPS72-204ENST00000471423 HIP1O00291 1037 aa21.21■□□□□ 0.99
VPS72-204ENST00000471423 JAG1P78504 1218 aa21.21■□□□□ 0.99
VPS72-204ENST00000471423 TATDN1Q6P1N9 297 aa21.21■□□□□ 0.99
VPS72-204ENST00000471423 CWC27Q6UX04 472 aaKnown RBP21.21■□□□□ 0.99
VPS72-204ENST00000471423 IFNL3Q8IZI9 196 aa21.21■□□□□ 0.99
VPS72-204ENST00000471423 SLC44A5Q8NCS7 719 aa21.21■□□□□ 0.99
VPS72-204ENST00000471423 MS4A4AQ96JQ5 239 aa21.21■□□□□ 0.99
VPS72-204ENST00000471423 ZHX2Q9Y6X8 837 aa21.21■□□□□ 0.99
VPS72-204ENST00000471423 PHIPQ8WWQ0 1821 aa21.2■□□□□ 0.98
VPS72-204ENST00000471423 FOXN1O15353 648 aa21.2■□□□□ 0.98
VPS72-204ENST00000471423 FOXP2O15409 715 aa21.2■□□□□ 0.98
VPS72-204ENST00000471423 TM4SF4P48230 202 aa21.2■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms