RNA–Protein interactions for RNA: ENST00000471307.6

CCDC39-202, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 783 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-202ENST00000471307 PRAMEF27A3QJZ7 478 aa9.87□□□□□ -0.83
CCDC39-202ENST00000471307 CAP2P40123 477 aa9.87□□□□□ -0.83
CCDC39-202ENST00000471307 WIPI1Q5MNZ9 446 aaPredicted RBP9.87□□□□□ -0.83
CCDC39-202ENST00000471307 TOP6BLQ8N6T0 577 aa9.87□□□□□ -0.83
CCDC39-202ENST00000471307 NETO1Q8TDF5 533 aa9.87□□□□□ -0.83
CCDC39-202ENST00000471307 WNT10AQ9GZT5 417 aa9.87□□□□□ -0.83
CCDC39-202ENST00000471307 BCL11AQ9H165 835 aa9.87□□□□□ -0.83
CCDC39-202ENST00000471307 LEFTY1O75610 366 aa9.86□□□□□ -0.83
CCDC39-202ENST00000471307 LRIG2O94898 1065 aa9.86□□□□□ -0.83
CCDC39-202ENST00000471307 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.86□□□□□ -0.83
CCDC39-202ENST00000471307 CCDC84Q86UT8 332 aaPredicted RBP9.86□□□□□ -0.83
CCDC39-202ENST00000471307 PRDM10Q9NQV6 1147 aa9.86□□□□□ -0.83
CCDC39-202ENST00000471307 VTI1BQ9UEU0 232 aa9.86□□□□□ -0.83
CCDC39-202ENST00000471307 PCDHB5Q9Y5E4 795 aa9.86□□□□□ -0.83
CCDC39-202ENST00000471307 TFE3P19532 575 aaPredicted RBP9.85□□□□□ -0.83
CCDC39-202ENST00000471307 IRAK1P51617 712 aa9.85□□□□□ -0.83
CCDC39-202ENST00000471307 MAP3K11Q16584 847 aa9.85□□□□□ -0.83
CCDC39-202ENST00000471307 TSNAXIP1Q2TAA8 658 aa9.85□□□□□ -0.83
CCDC39-202ENST00000471307 ZNF326Q5BKZ1 582 aaKnown RBP9.85□□□□□ -0.83
CCDC39-202ENST00000471307 AGBL5Q8NDL9 886 aa9.85□□□□□ -0.83
CCDC39-202ENST00000471307 GTF2IRD1Q9UHL9 959 aa9.85□□□□□ -0.83
CCDC39-202ENST00000471307 IGF2BP3O00425 579 aaKnown RBP eCLIP9.84□□□□□ -0.83
CCDC39-202ENST00000471307 GFRA2O00451 464 aa9.84□□□□□ -0.83
CCDC39-202ENST00000471307 TAGLNQ01995 201 aaKnown RBP9.84□□□□□ -0.83
CCDC39-202ENST00000471307 SEPT6Q14141 434 aa9.84□□□□□ -0.83
CCDC39-202ENST00000471307 IFI16Q16666 785 aaKnown RBP9.84□□□□□ -0.83
CCDC39-202ENST00000471307 BCL2L13Q9BXK5 485 aa9.84□□□□□ -0.83
CCDC39-202ENST00000471307 COL17A1Q9UMD9 1497 aaPredicted RBP9.84□□□□□ -0.83
CCDC39-202ENST00000471307 ETF1P62495 437 aaKnown RBP9.83□□□□□ -0.84
CCDC39-202ENST00000471307 RPL6Q02878 288 aaKnown RBP9.83□□□□□ -0.84
CCDC39-202ENST00000471307 PWP1Q13610 501 aa9.83□□□□□ -0.84
CCDC39-202ENST00000471307 MCTP1Q6DN14 999 aa9.83□□□□□ -0.84
CCDC39-202ENST00000471307 NFXL1Q6ZNB6 911 aa9.83□□□□□ -0.84
CCDC39-202ENST00000471307 ARHGAP27Q6ZUM4 889 aa9.83□□□□□ -0.84
CCDC39-202ENST00000471307 ARMCX6Q7L4S7 300 aa9.83□□□□□ -0.84
CCDC39-202ENST00000471307 UBE3DQ7Z6J8 389 aa9.83□□□□□ -0.84
CCDC39-202ENST00000471307 HID1Q8IV36 788 aa9.83□□□□□ -0.84
CCDC39-202ENST00000471307 MFSD2AQ8NA29 543 aa9.83□□□□□ -0.84
CCDC39-202ENST00000471307 PHC3Q8NDX5 983 aa9.83□□□□□ -0.84
CCDC39-202ENST00000471307 SLC5A6Q9Y289 635 aa9.83□□□□□ -0.84
CCDC39-202ENST00000471307 CEACAM5P06731 702 aa9.82□□□□□ -0.84
CCDC39-202ENST00000471307 OXCT1P55809 520 aa9.82□□□□□ -0.84
CCDC39-202ENST00000471307 TMCO4Q5TGY1 634 aa9.82□□□□□ -0.84
CCDC39-202ENST00000471307 FAM214BQ7L5A3 538 aa9.82□□□□□ -0.84
CCDC39-202ENST00000471307 FLCNQ8NFG4 579 aa9.82□□□□□ -0.84
CCDC39-202ENST00000471307 BCL7CQ8WUZ0 217 aaPredicted RBP9.82□□□□□ -0.84
CCDC39-202ENST00000471307 RSRP1Q9BUV0 290 aa9.82□□□□□ -0.84
CCDC39-202ENST00000471307 FOXQ1Q9C009 403 aa9.82□□□□□ -0.84
CCDC39-202ENST00000471307 HOMEZQ8IX15 550 aa9.81□□□□□ -0.84
CCDC39-202ENST00000471307 TP53INP2Q8IXH6 220 aa9.81□□□□□ -0.84
CCDC39-202ENST00000471307 PLD6Q8N2A8 252 aaKnown RBP9.81□□□□□ -0.84
CCDC39-202ENST00000471307 FAM181AQ8N9Y4 354 aa9.81□□□□□ -0.84
CCDC39-202ENST00000471307 VAV3Q9UKW4 847 aa9.81□□□□□ -0.84
CCDC39-202ENST00000471307 MAPK8IP1Q9UQF2 711 aa9.81□□□□□ -0.84
CCDC39-202ENST00000471307 TLR6Q9Y2C9 796 aa9.81□□□□□ -0.84
CCDC39-202ENST00000471307 TMEM265A0A087WTH1 108 aa9.8□□□□□ -0.84
CCDC39-202ENST00000471307 LMNB2Q03252 620 aa9.8□□□□□ -0.84
CCDC39-202ENST00000471307 PRKCQQ04759 706 aa9.8□□□□□ -0.84
CCDC39-202ENST00000471307 PDE4BQ07343 736 aa9.8□□□□□ -0.84
CCDC39-202ENST00000471307 SLBPQ14493 270 aaKnown RBP eCLIP9.8□□□□□ -0.84
CCDC39-202ENST00000471307 ABI1Q8IZP0 508 aa9.8□□□□□ -0.84
CCDC39-202ENST00000471307 HEXIM2Q96MH2 286 aaKnown RBP9.8□□□□□ -0.84
CCDC39-202ENST00000471307 FBRSQ9HAH7 460 aa9.8□□□□□ -0.84
CCDC39-202ENST00000471307 PAK6Q9NQU5 681 aaPredicted RBP9.8□□□□□ -0.84
CCDC39-202ENST00000471307 ADGRE2Q9UHX3 823 aa9.8□□□□□ -0.84
CCDC39-202ENST00000471307 SNX11Q9Y5W9 270 aa9.8□□□□□ -0.84
CCDC39-202ENST00000471307 GRK4P32298 578 aa9.79□□□□□ -0.84
CCDC39-202ENST00000471307 CDK8P49336 464 aa9.79□□□□□ -0.84
CCDC39-202ENST00000471307 RELL1Q8IUW5 271 aa9.79□□□□□ -0.84
CCDC39-202ENST00000471307 GIPC2Q8TF65 315 aa9.79□□□□□ -0.84
CCDC39-202ENST00000471307 TMEM74Q96NL1 305 aa9.79□□□□□ -0.84
CCDC39-202ENST00000471307 TNKS2Q9H2K2 1166 aa9.79□□□□□ -0.84
CCDC39-202ENST00000471307 PRDM5Q9NQX1 630 aaPredicted RBP9.79□□□□□ -0.84
CCDC39-202ENST00000471307 EOMESO95936 686 aa9.78□□□□□ -0.84
CCDC39-202ENST00000471307 CAMK2GQ13555 558 aaPredicted RBP9.78□□□□□ -0.84
CCDC39-202ENST00000471307 ZNF746Q6NUN9 644 aaPredicted RBP9.78□□□□□ -0.84
CCDC39-202ENST00000471307 RHOVQ96L33 236 aa9.78□□□□□ -0.84
CCDC39-202ENST00000471307 ADAM30Q9UKF2 790 aa9.78□□□□□ -0.84
CCDC39-202ENST00000471307 U3KQE9 123 aa9.78□□□□□ -0.84
CCDC39-202ENST00000471307 SLITRK5O94991 958 aa9.77□□□□□ -0.85
CCDC39-202ENST00000471307 CST3P01034 146 aaPredicted RBP9.77□□□□□ -0.85
CCDC39-202ENST00000471307 MRPL58Q14197 206 aaKnown RBP9.77□□□□□ -0.85
CCDC39-202ENST00000471307 NKG7Q16617 165 aa9.77□□□□□ -0.85
CCDC39-202ENST00000471307 C22orf34Q6ZV56 151 aa9.77□□□□□ -0.85
CCDC39-202ENST00000471307 MRPL41Q8IXM3 137 aaKnown RBP9.77□□□□□ -0.85
CCDC39-202ENST00000471307 COX4I2Q96KJ9 171 aa9.77□□□□□ -0.85
CCDC39-202ENST00000471307 HRASLS5Q96KN8 279 aa9.77□□□□□ -0.85
CCDC39-202ENST00000471307 GNAT3A8MTJ3 354 aa9.76□□□□□ -0.85
CCDC39-202ENST00000471307 BPNT1O95861 308 aa9.76□□□□□ -0.85
CCDC39-202ENST00000471307 SLC6A19Q695T7 634 aa9.76□□□□□ -0.85
CCDC39-202ENST00000471307 CBLL1Q75N03 491 aa9.76□□□□□ -0.85
CCDC39-202ENST00000471307 WFDC3Q8IUB2 231 aa9.76□□□□□ -0.85
CCDC39-202ENST00000471307 GATAD2BQ8WXI9 593 aa9.76□□□□□ -0.85
CCDC39-202ENST00000471307 JARID2Q92833 1246 aaPredicted RBP9.76□□□□□ -0.85
CCDC39-202ENST00000471307 PLAGL2Q9UPG8 496 aa9.76□□□□□ -0.85
CCDC39-202ENST00000471307 NISCHQ9Y2I1 1504 aa9.76□□□□□ -0.85
CCDC39-202ENST00000471307 CILPO75339 1184 aa9.75□□□□□ -0.85
CCDC39-202ENST00000471307 PF4P02776 101 aa9.75□□□□□ -0.85
CCDC39-202ENST00000471307 PGRP06401 933 aa9.75□□□□□ -0.85
CCDC39-202ENST00000471307 TAL1P17542 331 aaPredicted RBP9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms