RNA–Protein interactions for RNA: ENST00000471260.1

HMGN1-211, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 615 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-211ENST00000471260 IDH1O75874 414 aaKnown RBP16.44■□□□□ 0.22
HMGN1-211ENST00000471260 PRMT2P55345 433 aa16.44■□□□□ 0.22
HMGN1-211ENST00000471260 TTF1Q15361 905 aaPredicted RBP16.44■□□□□ 0.22
HMGN1-211ENST00000471260 METTL16Q86W50 562 aaKnown RBP16.44■□□□□ 0.22
HMGN1-211ENST00000471260 SIRT2Q8IXJ6 389 aa16.44■□□□□ 0.22
HMGN1-211ENST00000471260 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.44■□□□□ 0.22
HMGN1-211ENST00000471260 TGFBRAP1Q8WUH2 860 aa16.44■□□□□ 0.22
HMGN1-211ENST00000471260 ARMC5Q96C12 935 aa16.44■□□□□ 0.22
HMGN1-211ENST00000471260 PARK7Q99497 189 aaKnown RBP16.44■□□□□ 0.22
HMGN1-211ENST00000471260 CYP7A1P22680 504 aa16.43■□□□□ 0.22
HMGN1-211ENST00000471260 CAP2P40123 477 aa16.43■□□□□ 0.22
HMGN1-211ENST00000471260 GPAT2Q6NUI2 795 aa16.43■□□□□ 0.22
HMGN1-211ENST00000471260 ADGRA1Q86SQ6 560 aa16.43■□□□□ 0.22
HMGN1-211ENST00000471260 NBPF11Q86T75 865 aa16.43■□□□□ 0.22
HMGN1-211ENST00000471260 IL1RAPL2Q9NP60 686 aa16.43■□□□□ 0.22
HMGN1-211ENST00000471260 DOCK1Q14185 1865 aa16.43■□□□□ 0.22
HMGN1-211ENST00000471260 FLT1P17948 1338 aa16.43■□□□□ 0.22
HMGN1-211ENST00000471260 ADGRA2Q96PE1 1338 aa16.43■□□□□ 0.22
HMGN1-211ENST00000471260 IFIT2P09913 472 aaKnown RBP16.42■□□□□ 0.22
HMGN1-211ENST00000471260 HOXD10P28358 340 aa16.42■□□□□ 0.22
HMGN1-211ENST00000471260 CAP1Q01518 475 aa16.42■□□□□ 0.22
HMGN1-211ENST00000471260 GINM1Q9NU53 330 aa16.42■□□□□ 0.22
HMGN1-211ENST00000471260 USP17L5A8MUK1 530 aa16.41■□□□□ 0.22
HMGN1-211ENST00000471260 SLURP2P0DP57 97 aa16.41■□□□□ 0.22
HMGN1-211ENST00000471260 MAPKAPK5Q8IW41 473 aa16.41■□□□□ 0.22
HMGN1-211ENST00000471260 MAGEB6Q8N7X4 407 aa16.41■□□□□ 0.22
HMGN1-211ENST00000471260 ZNF280CQ8ND82 737 aa16.41■□□□□ 0.22
HMGN1-211ENST00000471260 AS3MTQ9HBK9 375 aa16.41■□□□□ 0.22
HMGN1-211ENST00000471260 CPA4Q9UI42 421 aa16.41■□□□□ 0.22
HMGN1-211ENST00000471260 MYO5AQ9Y4I1 1855 aaKnown RBP16.4■□□□□ 0.22
HMGN1-211ENST00000471260 TRIM75PA6NK02 468 aa16.4■□□□□ 0.22
HMGN1-211ENST00000471260 HLA-DOAP06340 250 aa16.4■□□□□ 0.22
HMGN1-211ENST00000471260 BCRP11274 1271 aa16.4■□□□□ 0.22
HMGN1-211ENST00000471260 GADL1Q6ZQY3 521 aa16.4■□□□□ 0.22
HMGN1-211ENST00000471260 PROCA1Q8NCQ7 364 aaPredicted RBP16.4■□□□□ 0.22
HMGN1-211ENST00000471260 TRIM34Q9BYJ4 488 aa16.4■□□□□ 0.22
HMGN1-211ENST00000471260 ANTXR1Q9H6X2 564 aa16.4■□□□□ 0.22
HMGN1-211ENST00000471260 AGTPBP1Q9UPW5 1226 aa16.4■□□□□ 0.22
HMGN1-211ENST00000471260 FAM196BA6NMK8 535 aa16.39■□□□□ 0.21
HMGN1-211ENST00000471260 ASNSP08243 561 aa16.39■□□□□ 0.21
HMGN1-211ENST00000471260 DYNLL1P63167 89 aaKnown RBP16.39■□□□□ 0.21
HMGN1-211ENST00000471260 SPP2Q13103 211 aa16.39■□□□□ 0.21
HMGN1-211ENST00000471260 SLC9C1Q4G0N8 1177 aa16.39■□□□□ 0.21
HMGN1-211ENST00000471260 CRACR2BQ8N4Y2 399 aaPredicted RBP16.39■□□□□ 0.21
HMGN1-211ENST00000471260 PNMA3Q9UL41 463 aa16.39■□□□□ 0.21
HMGN1-211ENST00000471260 PALD1Q9ULE6 856 aa16.39■□□□□ 0.21
HMGN1-211ENST00000471260 PTCH2Q9Y6C5 1203 aa16.39■□□□□ 0.21
HMGN1-211ENST00000471260 FOCADQ5VW36 1801 aa16.39■□□□□ 0.21
HMGN1-211ENST00000471260 PHIPQ8WWQ0 1821 aa16.39■□□□□ 0.21
HMGN1-211ENST00000471260 CYP2C8P10632 490 aa16.38■□□□□ 0.21
HMGN1-211ENST00000471260 PSMC4P43686 418 aa16.38■□□□□ 0.21
HMGN1-211ENST00000471260 USP5P45974 858 aa16.38■□□□□ 0.21
HMGN1-211ENST00000471260 PABPC4Q13310 644 aaKnown RBP eCLIP16.38■□□□□ 0.21
HMGN1-211ENST00000471260 SH3D19Q5HYK7 790 aa16.38■□□□□ 0.21
HMGN1-211ENST00000471260 ZNF333Q96JL9 665 aa16.38■□□□□ 0.21
HMGN1-211ENST00000471260 WDR18Q9BV38 432 aa16.38■□□□□ 0.21
HMGN1-211ENST00000471260 ARHGAP39Q9C0H5 1083 aa16.38■□□□□ 0.21
HMGN1-211ENST00000471260 SRRDQ9UH36 339 aa16.38■□□□□ 0.21
HMGN1-211ENST00000471260 NDUFB9Q9Y6M9 179 aa16.38■□□□□ 0.21
HMGN1-211ENST00000471260 PTPRFP10586 1907 aa16.38■□□□□ 0.21
HMGN1-211ENST00000471260 APBB1O00213 710 aa16.37■□□□□ 0.21
HMGN1-211ENST00000471260 FMNL1O95466 1100 aaPredicted RBP16.37■□□□□ 0.21
HMGN1-211ENST00000471260 FCGRTP55899 365 aa16.37■□□□□ 0.21
HMGN1-211ENST00000471260 SLC9C2Q5TAH2 1124 aa16.37■□□□□ 0.21
HMGN1-211ENST00000471260 C20orf194Q5TEA3 1177 aa16.37■□□□□ 0.21
HMGN1-211ENST00000471260 TTC6Q86TZ1 520 aa16.37■□□□□ 0.21
HMGN1-211ENST00000471260 MIGA1Q8NAN2 632 aa16.37■□□□□ 0.21
HMGN1-211ENST00000471260 SMCR8Q8TEV9 937 aaPredicted RBP16.37■□□□□ 0.21
HMGN1-211ENST00000471260 TMEM106CQ9BVX2 250 aa16.37■□□□□ 0.21
HMGN1-211ENST00000471260 EHD4Q9H223 541 aa16.37■□□□□ 0.21
HMGN1-211ENST00000471260 DNAJC18Q9H819 358 aa16.37■□□□□ 0.21
HMGN1-211ENST00000471260 CDK5RAP2Q96SN8 1893 aa16.37■□□□□ 0.21
HMGN1-211ENST00000471260 HTTP42858 3142 aa16.36■□□□□ 0.21
HMGN1-211ENST00000471260 C19orf81C9J6K1 198 aa16.36■□□□□ 0.21
HMGN1-211ENST00000471260 ATP5JP18859 108 aa16.36■□□□□ 0.21
HMGN1-211ENST00000471260 RRP1BQ14684 758 aaKnown RBP16.36■□□□□ 0.21
HMGN1-211ENST00000471260 TRIM47Q96LD4 638 aa16.36■□□□□ 0.21
HMGN1-211ENST00000471260 RIOK1Q9BRS2 568 aaKnown RBP16.36■□□□□ 0.21
HMGN1-211ENST00000471260 LRRCC1Q9C099 1032 aa16.36■□□□□ 0.21
HMGN1-211ENST00000471260 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.36■□□□□ 0.21
HMGN1-211ENST00000471260 MAGEB6P1A0A0J9YX57 407 aa16.35■□□□□ 0.21
HMGN1-211ENST00000471260 PDE6AP16499 860 aa16.35■□□□□ 0.21
HMGN1-211ENST00000471260 OSBPP22059 807 aa16.35■□□□□ 0.21
HMGN1-211ENST00000471260 CTGFP29279 349 aa16.35■□□□□ 0.21
HMGN1-211ENST00000471260 BACE1P56817 501 aa16.35■□□□□ 0.21
HMGN1-211ENST00000471260 TATDN1Q6P1N9 297 aa16.35■□□□□ 0.21
HMGN1-211ENST00000471260 CCDC84Q86UT8 332 aaPredicted RBP16.35■□□□□ 0.21
HMGN1-211ENST00000471260 SAP30BPQ9UHR5 308 aaKnown RBP16.35■□□□□ 0.21
HMGN1-211ENST00000471260 SERPINB13Q9UIV8 391 aa16.35■□□□□ 0.21
HMGN1-211ENST00000471260 TAOK2Q9UL54 1235 aa16.35■□□□□ 0.21
HMGN1-211ENST00000471260 SIPA1L1O43166 1804 aa16.35■□□□□ 0.21
HMGN1-211ENST00000471260 KIAA0100Q14667 2235 aaKnown RBP16.34■□□□□ 0.21
HMGN1-211ENST00000471260 ATAD5Q96QE3 1844 aa16.34■□□□□ 0.21
HMGN1-211ENST00000471260 POTEFA5A3E0 1075 aa16.34■□□□□ 0.21
HMGN1-211ENST00000471260 GOLIM4O00461 696 aa16.34■□□□□ 0.21
HMGN1-211ENST00000471260 GCLCP48506 637 aaPredicted RBP16.34■□□□□ 0.21
HMGN1-211ENST00000471260 HMGCS2P54868 508 aa16.34■□□□□ 0.21
HMGN1-211ENST00000471260 TREML2Q5T2D2 321 aa16.34■□□□□ 0.21
HMGN1-211ENST00000471260 RAET1EQ8TD07 263 aa16.34■□□□□ 0.21
HMGN1-211ENST00000471260 DNAJC2Q99543 621 aaKnown RBP16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms