RNA–Protein interactions for RNA: ENST00000471181.6

BRCA1-210, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 5,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-210ENST00000471181 RASSF2P50749 326 aa7.64□□□□□ -1.19
BRCA1-210ENST00000471181 IFT20Q8IY31 132 aa7.64□□□□□ -1.19
BRCA1-210ENST00000471181 CCDC105Q8IYK2 499 aa7.64□□□□□ -1.19
BRCA1-210ENST00000471181 FNBP4Q8N3X1 1017 aaPredicted RBP7.64□□□□□ -1.19
BRCA1-210ENST00000471181 CFAP61Q8NHU2 1237 aa7.64□□□□□ -1.19
BRCA1-210ENST00000471181 ZCRB1Q8TBF4 217 aaKnown RBP7.64□□□□□ -1.19
BRCA1-210ENST00000471181 KRT12Q99456 494 aa7.64□□□□□ -1.19
BRCA1-210ENST00000471181 NBPF3Q9H094 633 aa7.64□□□□□ -1.19
BRCA1-210ENST00000471181 MAP3K2Q9Y2U5 619 aa7.64□□□□□ -1.19
BRCA1-210ENST00000471181 CALUO43852 315 aaPredicted RBP7.64□□□□□ -1.19
BRCA1-210ENST00000471181 PRPF6O94906 941 aaKnown RBP7.64□□□□□ -1.19
BRCA1-210ENST00000471181 SMTNP53814 917 aa7.64□□□□□ -1.19
BRCA1-210ENST00000471181 FAM180AQ6UWF9 173 aa7.64□□□□□ -1.19
BRCA1-210ENST00000471181 STAG1Q8WVM7 1258 aa7.64□□□□□ -1.19
BRCA1-210ENST00000471181 KRT10P13645 584 aa7.64□□□□□ -1.19
BRCA1-210ENST00000471181 STX2P32856 288 aa7.64□□□□□ -1.19
BRCA1-210ENST00000471181 KRT81Q14533 505 aa7.64□□□□□ -1.19
BRCA1-210ENST00000471181 CAPN12Q6ZSI9 719 aa7.64□□□□□ -1.19
BRCA1-210ENST00000471181 USP48Q86UV5 1035 aa7.64□□□□□ -1.19
BRCA1-210ENST00000471181 CCDC13Q8IYE1 715 aa7.64□□□□□ -1.19
BRCA1-210ENST00000471181 MCUQ8NE86 351 aa7.64□□□□□ -1.19
BRCA1-210ENST00000471181 KIF9Q9HAQ2 790 aa7.64□□□□□ -1.19
BRCA1-210ENST00000471181 AMOTL2Q9Y2J4 779 aa7.64□□□□□ -1.19
BRCA1-210ENST00000471181 ANGPTL3Q9Y5C1 460 aa7.64□□□□□ -1.19
BRCA1-210ENST00000471181 RTEL1-TNFRSF6BF6WH68 1400 aa7.64□□□□□ -1.19
BRCA1-210ENST00000471181 GTPBP10A4D1E9 387 aaKnown RBP7.63□□□□□ -1.19
BRCA1-210ENST00000471181 TRIM75PA6NK02 468 aa7.63□□□□□ -1.19
BRCA1-210ENST00000471181 CEP104O60308 925 aa7.63□□□□□ -1.19
BRCA1-210ENST00000471181 SERPINI2O75830 405 aa7.63□□□□□ -1.19
BRCA1-210ENST00000471181 LONP1P36776 959 aaKnown RBP7.63□□□□□ -1.19
BRCA1-210ENST00000471181 ARHGAP25P42331 645 aa7.63□□□□□ -1.19
BRCA1-210ENST00000471181 GNAQP50148 359 aa7.63□□□□□ -1.19
BRCA1-210ENST00000471181 AP1ARQ63HQ0 302 aa7.63□□□□□ -1.19
BRCA1-210ENST00000471181 MYLK4Q86YV6 388 aaPredicted RBP7.63□□□□□ -1.19
BRCA1-210ENST00000471181 RSAD2Q8WXG1 361 aa7.63□□□□□ -1.19
BRCA1-210ENST00000471181 FGD4Q96M96 766 aa7.63□□□□□ -1.19
BRCA1-210ENST00000471181 OGFRQ9NZT2 677 aa7.63□□□□□ -1.19
BRCA1-210ENST00000471181 SUCLA2Q9P2R7 463 aaPredicted RBP7.63□□□□□ -1.19
BRCA1-210ENST00000471181 PYGLP06737 847 aa7.63□□□□□ -1.19
BRCA1-210ENST00000471181 MAP2K2P36507 400 aa7.63□□□□□ -1.19
BRCA1-210ENST00000471181 RASIP1Q5U651 963 aa7.63□□□□□ -1.19
BRCA1-210ENST00000471181 Q6ZUG5 572 aa7.63□□□□□ -1.19
BRCA1-210ENST00000471181 NLRP7Q8WX94 980 aa7.63□□□□□ -1.19
BRCA1-210ENST00000471181 NAPGQ99747 312 aaPredicted RBP7.63□□□□□ -1.19
BRCA1-210ENST00000471181 SMYD2Q9NRG4 433 aa7.63□□□□□ -1.19
BRCA1-210ENST00000471181 CD2APQ9Y5K6 639 aa7.63□□□□□ -1.19
BRCA1-210ENST00000471181 AKR1B15C9JRZ8 316 aaPredicted RBP7.63□□□□□ -1.19
BRCA1-210ENST00000471181 M0QZ92 97 aa7.63□□□□□ -1.19
BRCA1-210ENST00000471181 NOP56O00567 594 aaKnown RBP7.63□□□□□ -1.19
BRCA1-210ENST00000471181 UQCRFS1P1P0C7P4 283 aa7.63□□□□□ -1.19
BRCA1-210ENST00000471181 CD19P15391 556 aa7.63□□□□□ -1.19
BRCA1-210ENST00000471181 EEF1DP29692 281 aaKnown RBP7.63□□□□□ -1.19
BRCA1-210ENST00000471181 TUBB4BP68371 445 aa7.63□□□□□ -1.19
BRCA1-210ENST00000471181 NFE2L2Q16236 605 aa7.63□□□□□ -1.19
BRCA1-210ENST00000471181 ANKRD20A4Q4UJ75 823 aa7.63□□□□□ -1.19
BRCA1-210ENST00000471181 ANKRD20A8PQ5CZ79 823 aa7.63□□□□□ -1.19
BRCA1-210ENST00000471181 ANKRD20A2Q5SQ80 823 aa7.63□□□□□ -1.19
BRCA1-210ENST00000471181 ANKRD20A1Q5TYW2 823 aa7.63□□□□□ -1.19
BRCA1-210ENST00000471181 SV2BQ7L1I2 683 aa7.63□□□□□ -1.19
BRCA1-210ENST00000471181 TTC30BQ8N4P2 665 aa7.63□□□□□ -1.19
BRCA1-210ENST00000471181 RMDN2Q96LZ7 410 aa7.63□□□□□ -1.19
BRCA1-210ENST00000471181 SLC12A5Q9H2X9 1139 aa7.63□□□□□ -1.19
BRCA1-210ENST00000471181 CNNM2Q9H8M5 875 aa7.63□□□□□ -1.19
BRCA1-210ENST00000471181 BEND3Q5T5X7 828 aa7.63□□□□□ -1.19
BRCA1-210ENST00000471181 LRCH2Q5VUJ6 765 aa7.63□□□□□ -1.19
BRCA1-210ENST00000471181 DENND2CQ68D51 928 aa7.63□□□□□ -1.19
BRCA1-210ENST00000471181 FAM186BQ8IYM0 893 aa7.63□□□□□ -1.19
BRCA1-210ENST00000471181 TAB3Q8N5C8 712 aaPredicted RBP7.63□□□□□ -1.19
BRCA1-210ENST00000471181 CCDC138Q96M89 665 aa7.63□□□□□ -1.19
BRCA1-210ENST00000471181 RTL9Q8NET4 1388 aa7.63□□□□□ -1.19
BRCA1-210ENST00000471181 MAGEB6P1A0A0J9YX57 407 aa7.63□□□□□ -1.19
BRCA1-210ENST00000471181 RIMBP2O15034 1052 aa7.63□□□□□ -1.19
BRCA1-210ENST00000471181 CALML3P27482 149 aa7.63□□□□□ -1.19
BRCA1-210ENST00000471181 BRDTQ58F21 947 aaPredicted RBP7.63□□□□□ -1.19
BRCA1-210ENST00000471181 MYSM1Q5VVJ2 828 aa7.63□□□□□ -1.19
BRCA1-210ENST00000471181 TCEANC2Q96MN5 208 aa7.63□□□□□ -1.19
BRCA1-210ENST00000471181 PSMB7Q99436 277 aa7.63□□□□□ -1.19
BRCA1-210ENST00000471181 NEUROG2Q9H2A3 272 aa7.63□□□□□ -1.19
BRCA1-210ENST00000471181 GIMAP4Q9NUV9 329 aa7.63□□□□□ -1.19
BRCA1-210ENST00000471181 DACT1Q9NYF0 836 aa7.63□□□□□ -1.19
BRCA1-210ENST00000471181 HMG20BQ9P0W2 317 aa7.63□□□□□ -1.19
BRCA1-210ENST00000471181 RNF40O75150 1001 aa7.62□□□□□ -1.19
BRCA1-210ENST00000471181 TRPA1O75762 1119 aa7.62□□□□□ -1.19
BRCA1-210ENST00000471181 CSPG5O95196 566 aa7.62□□□□□ -1.19
BRCA1-210ENST00000471181 MYCLP12524 364 aaPredicted RBP7.62□□□□□ -1.19
BRCA1-210ENST00000471181 KIF11P52732 1056 aa7.62□□□□□ -1.19
BRCA1-210ENST00000471181 CCDC152Q4G0S7 254 aa7.62□□□□□ -1.19
BRCA1-210ENST00000471181 VWA3BQ502W6 1294 aa7.62□□□□□ -1.19
BRCA1-210ENST00000471181 DTHD1Q6ZMT9 781 aa7.62□□□□□ -1.19
BRCA1-210ENST00000471181 ZNF804AQ7Z570 1209 aa7.62□□□□□ -1.19
BRCA1-210ENST00000471181 CCDC68Q9H2F9 335 aa7.62□□□□□ -1.19
BRCA1-210ENST00000471181 FAM8A1Q9UBU6 413 aa7.62□□□□□ -1.19
BRCA1-210ENST00000471181 OCM2P0CE71 109 aa7.62□□□□□ -1.19
BRCA1-210ENST00000471181 OCMP0CE72 109 aaPredicted RBP7.62□□□□□ -1.19
BRCA1-210ENST00000471181 SCYL2Q6P3W7 929 aa7.62□□□□□ -1.19
BRCA1-210ENST00000471181 TRIM50Q86XT4 487 aa7.62□□□□□ -1.19
BRCA1-210ENST00000471181 ZGPATQ8N5A5 531 aaKnown RBP7.62□□□□□ -1.19
BRCA1-210ENST00000471181 NGLY1Q96IV0 654 aa7.62□□□□□ -1.19
BRCA1-210ENST00000471181 ECHDC1Q9NTX5 307 aa7.62□□□□□ -1.19
BRCA1-210ENST00000471181 HIP1RO75146 1068 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms