RNA–Protein interactions for RNA: ENST00000470396.1

PSMD4-210, Transcript of proteasome 26S subunit, non-ATPase 4, humanhuman

TSL 1 (best)

Gene PSMD4, Length 338 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD4-210ENST00000470396 ZNF341Q9BYN7 854 aa8.26□□□□□ -1.09
PSMD4-210ENST00000470396 OSBPL3Q9H4L5 887 aa8.26□□□□□ -1.09
PSMD4-210ENST00000470396 DCP1AQ9NPI6 582 aaPredicted RBP8.26□□□□□ -1.09
PSMD4-210ENST00000470396 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.26□□□□□ -1.09
PSMD4-210ENST00000470396 SAP30BPQ9UHR5 308 aaKnown RBP8.26□□□□□ -1.09
PSMD4-210ENST00000470396 PTPRFP10586 1907 aa8.26□□□□□ -1.09
PSMD4-210ENST00000470396 ATAD5Q96QE3 1844 aa8.26□□□□□ -1.09
PSMD4-210ENST00000470396 SPDYE5A6NIY4 337 aa8.25□□□□□ -1.09
PSMD4-210ENST00000470396 FOXP2O15409 715 aa8.25□□□□□ -1.09
PSMD4-210ENST00000470396 RNF113AO15541 343 aaKnown RBP8.25□□□□□ -1.09
PSMD4-210ENST00000470396 TBC1D12O60347 775 aa8.25□□□□□ -1.09
PSMD4-210ENST00000470396 ZBTB48P10074 688 aaPredicted RBP8.25□□□□□ -1.09
PSMD4-210ENST00000470396 CYP2D6P10635 497 aa8.25□□□□□ -1.09
PSMD4-210ENST00000470396 CTCFP49711 727 aaPredicted RBP8.25□□□□□ -1.09
PSMD4-210ENST00000470396 PLCD1P51178 756 aa8.25□□□□□ -1.09
PSMD4-210ENST00000470396 ZMYM1Q5SVZ6 1142 aa8.25□□□□□ -1.09
PSMD4-210ENST00000470396 NOL9Q5SY16 702 aaKnown RBP8.25□□□□□ -1.09
PSMD4-210ENST00000470396 DCAF15Q66K64 600 aa8.25□□□□□ -1.09
PSMD4-210ENST00000470396 CCDC84Q86UT8 332 aaPredicted RBP8.25□□□□□ -1.09
PSMD4-210ENST00000470396 ZSCAN29Q8IWY8 852 aaPredicted RBP8.25□□□□□ -1.09
PSMD4-210ENST00000470396 OPTNQ96CV9 577 aa8.25□□□□□ -1.09
PSMD4-210ENST00000470396 MS4A4AQ96JQ5 239 aa8.25□□□□□ -1.09
PSMD4-210ENST00000470396 STRBPQ96SI9 672 aaKnown RBP8.25□□□□□ -1.09
PSMD4-210ENST00000470396 PTPN18Q99952 460 aa8.25□□□□□ -1.09
PSMD4-210ENST00000470396 NOL10Q9BSC4 688 aaKnown RBP8.25□□□□□ -1.09
PSMD4-210ENST00000470396 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.25□□□□□ -1.09
PSMD4-210ENST00000470396 EPB41L4AQ9HCS5 686 aaPredicted RBP8.25□□□□□ -1.09
PSMD4-210ENST00000470396 TSKSQ9UJT2 592 aa8.25□□□□□ -1.09
PSMD4-210ENST00000470396 CYP2D7A0A087X1C5 515 aa8.24□□□□□ -1.09
PSMD4-210ENST00000470396 GSG1L2A8MUP6 293 aa8.24□□□□□ -1.09
PSMD4-210ENST00000470396 IGF2BP3O00425 579 aaKnown RBP eCLIP8.24□□□□□ -1.09
PSMD4-210ENST00000470396 IRF6O14896 467 aa8.24□□□□□ -1.09
PSMD4-210ENST00000470396 GSPT1P15170 499 aaKnown RBP8.24□□□□□ -1.09
PSMD4-210ENST00000470396 TM4SF4P48230 202 aa8.24□□□□□ -1.09
PSMD4-210ENST00000470396 MAP2K1Q02750 393 aaPredicted RBP8.24□□□□□ -1.09
PSMD4-210ENST00000470396 GABPAQ06546 454 aa8.24□□□□□ -1.09
PSMD4-210ENST00000470396 MOGSQ13724 837 aa8.24□□□□□ -1.09
PSMD4-210ENST00000470396 CERS3Q8IU89 383 aa8.24□□□□□ -1.09
PSMD4-210ENST00000470396 APPBP2Q92624 585 aa8.24□□□□□ -1.09
PSMD4-210ENST00000470396 HOOK2Q96ED9 719 aa8.24□□□□□ -1.09
PSMD4-210ENST00000470396 OTUD5Q96G74 571 aa8.24□□□□□ -1.09
PSMD4-210ENST00000470396 FSD1Q9BTV5 496 aa8.24□□□□□ -1.09
PSMD4-210ENST00000470396 CRNKL1Q9BZJ0 848 aaKnown RBP8.24□□□□□ -1.09
PSMD4-210ENST00000470396 DHX36Q9H2U1 1008 aaKnown RBP8.24□□□□□ -1.09
PSMD4-210ENST00000470396 R3HDMLQ9H3Y0 253 aa8.24□□□□□ -1.09
PSMD4-210ENST00000470396 PI4KBQ9UBF8 816 aa8.24□□□□□ -1.09
PSMD4-210ENST00000470396 CASP8AP2Q9UKL3 1982 aa8.24□□□□□ -1.09
PSMD4-210ENST00000470396 A0A0D9SFI3 127 aa8.23□□□□□ -1.09
PSMD4-210ENST00000470396 TESPA1A2RU30 521 aaPredicted RBP8.23□□□□□ -1.09
PSMD4-210ENST00000470396 GPAA1O43292 621 aa8.23□□□□□ -1.09
PSMD4-210ENST00000470396 CTNND1O60716 968 aaKnown RBP8.23□□□□□ -1.09
PSMD4-210ENST00000470396 ZFYP08048 801 aaPredicted RBP8.23□□□□□ -1.09
PSMD4-210ENST00000470396 HSPA8P11142 646 aaKnown RBP8.23□□□□□ -1.09
PSMD4-210ENST00000470396 PTPRAP18433 802 aa8.23□□□□□ -1.09
PSMD4-210ENST00000470396 SHMT1P34896 483 aa8.23□□□□□ -1.09
PSMD4-210ENST00000470396 USP5P45974 858 aa8.23□□□□□ -1.09
PSMD4-210ENST00000470396 LBX1P52954 281 aa8.23□□□□□ -1.09
PSMD4-210ENST00000470396 ZSCAN25Q6NSZ9 544 aa8.23□□□□□ -1.09
PSMD4-210ENST00000470396 CCDC129Q6ZRS4 1044 aa8.23□□□□□ -1.09
PSMD4-210ENST00000470396 ERO1BQ86YB8 467 aa8.23□□□□□ -1.09
PSMD4-210ENST00000470396 SLC44A5Q8NCS7 719 aa8.23□□□□□ -1.09
PSMD4-210ENST00000470396 BRI3BPQ8WY22 251 aa8.23□□□□□ -1.09
PSMD4-210ENST00000470396 AIDAQ96BJ3 306 aa8.23□□□□□ -1.09
PSMD4-210ENST00000470396 EVI5LQ96CN4 794 aa8.23□□□□□ -1.09
PSMD4-210ENST00000470396 FAM227BQ96M60 508 aa8.23□□□□□ -1.09
PSMD4-210ENST00000470396 EHD4Q9H223 541 aa8.23□□□□□ -1.09
PSMD4-210ENST00000470396 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.23□□□□□ -1.09
PSMD4-210ENST00000470396 RNF186Q9NXI6 227 aa8.23□□□□□ -1.09
PSMD4-210ENST00000470396 ZBTB47Q9UFB7 747 aaPredicted RBP8.23□□□□□ -1.09
PSMD4-210ENST00000470396 HERC5Q9UII4 1024 aaKnown RBP8.23□□□□□ -1.09
PSMD4-210ENST00000470396 KCNH4Q9UQ05 1017 aa8.23□□□□□ -1.09
PSMD4-210ENST00000470396 CSADQ9Y600 493 aa8.23□□□□□ -1.09
PSMD4-210ENST00000470396 TNRC18O15417 2968 aaPredicted RBP8.22□□□□□ -1.09
PSMD4-210ENST00000470396 TRPA1O75762 1119 aa8.22□□□□□ -1.09
PSMD4-210ENST00000470396 CAP2P40123 477 aa8.22□□□□□ -1.09
PSMD4-210ENST00000470396 PPIL2Q13356 520 aa8.22□□□□□ -1.09
PSMD4-210ENST00000470396 TATDN1Q6P1N9 297 aa8.22□□□□□ -1.09
PSMD4-210ENST00000470396 CTR9Q6PD62 1173 aa8.22□□□□□ -1.09
PSMD4-210ENST00000470396 ZNF589Q86UQ0 364 aaPredicted RBP8.22□□□□□ -1.09
PSMD4-210ENST00000470396 IFNL1Q8IU54 200 aa8.22□□□□□ -1.09
PSMD4-210ENST00000470396 SCYL3Q8IZE3 742 aa8.22□□□□□ -1.09
PSMD4-210ENST00000470396 DYNLL2Q96FJ2 89 aa8.22□□□□□ -1.09
PSMD4-210ENST00000470396 IL25Q9H293 177 aa8.22□□□□□ -1.09
PSMD4-210ENST00000470396 ATP8A2Q9NTI2 1148 aa8.22□□□□□ -1.09
PSMD4-210ENST00000470396 MCM9Q9NXL9 1143 aa8.22□□□□□ -1.09
PSMD4-210ENST00000470396 AFG3L2Q9Y4W6 797 aa8.22□□□□□ -1.09
PSMD4-210ENST00000470396 SLC4A4Q9Y6R1 1079 aa8.22□□□□□ -1.09
PSMD4-210ENST00000470396 LOC285556D6RIA3 1793 aa8.21□□□□□ -1.1
PSMD4-210ENST00000470396 MANSC4A6NHS7 340 aaPredicted RBP8.21□□□□□ -1.1
PSMD4-210ENST00000470396 USP17L12C9JPN9 530 aa8.21□□□□□ -1.1
PSMD4-210ENST00000470396 USP17L21D6R901 530 aa8.21□□□□□ -1.1
PSMD4-210ENST00000470396 GDF11O95390 407 aa8.21□□□□□ -1.1
PSMD4-210ENST00000470396 GUCY1A2P33402 732 aa8.21□□□□□ -1.1
PSMD4-210ENST00000470396 PPATQ06203 517 aa8.21□□□□□ -1.1
PSMD4-210ENST00000470396 NMIQ13287 307 aaPredicted RBP8.21□□□□□ -1.1
PSMD4-210ENST00000470396 DGKZQ13574 1117 aa8.21□□□□□ -1.1
PSMD4-210ENST00000470396 TTC22Q5TAA0 569 aa8.21□□□□□ -1.1
PSMD4-210ENST00000470396 C12orf60Q5U649 245 aa8.21□□□□□ -1.1
PSMD4-210ENST00000470396 VPS53Q5VIR6 699 aa8.21□□□□□ -1.1
PSMD4-210ENST00000470396 FOXP4Q8IVH2 680 aaPredicted RBP8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms