RNA–Protein interactions for RNA: ENST00000469670.1

TTC28-205, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 3

Gene TTC28, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-205ENST00000469670 SSH1Q8WYL5 1049 aa22.68■■□□□ 1.22
TTC28-205ENST00000469670 OSBPL5Q9H0X9 879 aaPredicted RBP22.68■■□□□ 1.22
TTC28-205ENST00000469670 XPO5Q9HAV4 1204 aaKnown RBP eCLIP22.68■■□□□ 1.22
TTC28-205ENST00000469670 PHIPQ8WWQ0 1821 aa22.68■■□□□ 1.22
TTC28-205ENST00000469670 MROH7-TTC4A0A0A0MT08 1334 aa22.67■■□□□ 1.22
TTC28-205ENST00000469670 IL15P40933 162 aaPredicted RBP22.67■■□□□ 1.22
TTC28-205ENST00000469670 HMGCS2P54868 508 aa22.67■■□□□ 1.22
TTC28-205ENST00000469670 SPTY2D1Q68D10 685 aaPredicted RBP22.67■■□□□ 1.22
TTC28-205ENST00000469670 ZNF280CQ8ND82 737 aa22.67■■□□□ 1.22
TTC28-205ENST00000469670 MTMR10Q9NXD2 777 aa22.67■■□□□ 1.22
TTC28-205ENST00000469670 OGDHLQ9ULD0 1010 aa22.67■■□□□ 1.22
TTC28-205ENST00000469670 PDS5AQ29RF7 1337 aaKnown RBP22.66■■□□□ 1.22
TTC28-205ENST00000469670 RHBDL3P58872 404 aa22.66■■□□□ 1.22
TTC28-205ENST00000469670 TBC1D2Q9BYX2 928 aa22.66■■□□□ 1.22
TTC28-205ENST00000469670 ASCC2Q9H1I8 757 aaPredicted RBP22.66■■□□□ 1.22
TTC28-205ENST00000469670 GPR75-ASB3A0A0A6YYF3 556 aa22.65■■□□□ 1.22
TTC28-205ENST00000469670 NPM3O75607 178 aaKnown RBP22.65■■□□□ 1.22
TTC28-205ENST00000469670 UBTFL1P0CB47 393 aaPredicted RBP22.65■■□□□ 1.22
TTC28-205ENST00000469670 TRIB2Q92519 343 aa22.65■■□□□ 1.22
TTC28-205ENST00000469670 UBE2OQ9C0C9 1292 aaKnown RBP22.65■■□□□ 1.22
TTC28-205ENST00000469670 PA2G4Q9UQ80 394 aaKnown RBP22.65■■□□□ 1.22
TTC28-205ENST00000469670 MYH2Q9UKX2 1941 aa22.65■■□□□ 1.22
TTC28-205ENST00000469670 ZNF521Q96K83 1311 aa22.64■■□□□ 1.22
TTC28-205ENST00000469670 DOCK3Q8IZD9 2030 aa22.64■■□□□ 1.22
TTC28-205ENST00000469670 MORF4L1Q9UBU8 362 aa22.64■■□□□ 1.21
TTC28-205ENST00000469670 ANP32CO43423 234 aa22.63■■□□□ 1.21
TTC28-205ENST00000469670 CYP2B6P20813 491 aa22.63■■□□□ 1.21
TTC28-205ENST00000469670 TIMM10P62072 90 aa22.63■■□□□ 1.21
TTC28-205ENST00000469670 MECOMQ03112 1051 aa22.63■■□□□ 1.21
TTC28-205ENST00000469670 SH3D19Q5HYK7 790 aa22.63■■□□□ 1.21
TTC28-205ENST00000469670 MAP3K21Q5TCX8 1036 aa22.63■■□□□ 1.21
TTC28-205ENST00000469670 ERICH6Q7L0X2 663 aa22.63■■□□□ 1.21
TTC28-205ENST00000469670 FAM9BQ8IZU0 186 aa22.63■■□□□ 1.21
TTC28-205ENST00000469670 PFASO15067 1338 aa22.62■■□□□ 1.21
TTC28-205ENST00000469670 USP17L5A8MUK1 530 aa22.62■■□□□ 1.21
TTC28-205ENST00000469670 PRKAR2AP13861 404 aaKnown RBP22.62■■□□□ 1.21
TTC28-205ENST00000469670 CAP2P40123 477 aa22.62■■□□□ 1.21
TTC28-205ENST00000469670 ZNF384Q8TF68 577 aa22.62■■□□□ 1.21
TTC28-205ENST00000469670 DDX60LQ5H9U9 1706 aaKnown RBP22.62■■□□□ 1.21
TTC28-205ENST00000469670 LOC285556D6RIA3 1793 aa22.61■■□□□ 1.21
TTC28-205ENST00000469670 RRP1BQ14684 758 aaKnown RBP22.61■■□□□ 1.21
TTC28-205ENST00000469670 AS3MTQ9HBK9 375 aa22.61■■□□□ 1.21
TTC28-205ENST00000469670 COPRSQ9NQ92 184 aa22.61■■□□□ 1.21
TTC28-205ENST00000469670 MAP4K4O95819 1239 aaPredicted RBP22.6■■□□□ 1.21
TTC28-205ENST00000469670 NUDT12Q9BQG2 462 aa22.6■■□□□ 1.21
TTC28-205ENST00000469670 COL2A1P02458 1487 aaPredicted RBP22.6■■□□□ 1.21
TTC28-205ENST00000469670 XRCC5P13010 732 aaKnown RBP22.59■■□□□ 1.21
TTC28-205ENST00000469670 IRX3P78415 501 aaPredicted RBP22.59■■□□□ 1.21
TTC28-205ENST00000469670 SOCS4Q8WXH5 440 aa22.59■■□□□ 1.21
TTC28-205ENST00000469670 XAGE2Q96GT9 111 aa22.59■■□□□ 1.21
TTC28-205ENST00000469670 A0A1B0GUL7 405 aa22.58■■□□□ 1.21
TTC28-205ENST00000469670 LDHCP07864 332 aa22.58■■□□□ 1.21
TTC28-205ENST00000469670 COL6A1P12109 1028 aa22.58■■□□□ 1.21
TTC28-205ENST00000469670 GSTO1P78417 241 aa22.58■■□□□ 1.21
TTC28-205ENST00000469670 MVPQ14764 893 aaKnown RBP22.58■■□□□ 1.21
TTC28-205ENST00000469670 P2RX7Q99572 595 aaKnown RBP22.58■■□□□ 1.21
TTC28-205ENST00000469670 HERC5Q9UII4 1024 aaKnown RBP22.58■■□□□ 1.21
TTC28-205ENST00000469670 PEX10O60683 326 aa22.57■■□□□ 1.2
TTC28-205ENST00000469670 MTMR2Q13614 643 aa22.57■■□□□ 1.2
TTC28-205ENST00000469670 ALDH1L2Q3SY69 923 aa22.57■■□□□ 1.2
TTC28-205ENST00000469670 TRMT44Q8IYL2 757 aaKnown RBP22.57■■□□□ 1.2
TTC28-205ENST00000469670 GPRC5AQ8NFJ5 357 aa22.57■■□□□ 1.2
TTC28-205ENST00000469670 NSUN4Q96CB9 384 aaKnown RBP22.57■■□□□ 1.2
TTC28-205ENST00000469670 WDR18Q9BV38 432 aa22.57■■□□□ 1.2
TTC28-205ENST00000469670 COL25A1Q9BXS0 654 aaPredicted RBP22.57■■□□□ 1.2
TTC28-205ENST00000469670 TXNRD2Q9NNW7 524 aa22.57■■□□□ 1.2
TTC28-205ENST00000469670 TMOD4Q9NZQ9 345 aa22.57■■□□□ 1.2
TTC28-205ENST00000469670 HDAC5Q9UQL6 1122 aa22.57■■□□□ 1.2
TTC28-205ENST00000469670 AKAP2Q9Y2D5 859 aa22.57■■□□□ 1.2
TTC28-205ENST00000469670 E9PSI1 815 aa22.56■■□□□ 1.2
TTC28-205ENST00000469670 ZKSCAN1P17029 563 aaPredicted RBP22.56■■□□□ 1.2
TTC28-205ENST00000469670 HOXA7P31268 230 aaPredicted RBP22.56■■□□□ 1.2
TTC28-205ENST00000469670 BACE1P56817 501 aa22.56■■□□□ 1.2
TTC28-205ENST00000469670 CACNB2Q08289 660 aaPredicted RBP22.56■■□□□ 1.2
TTC28-205ENST00000469670 PDE3AQ14432 1141 aa22.56■■□□□ 1.2
TTC28-205ENST00000469670 LRRC26Q2I0M4 334 aa22.56■■□□□ 1.2
TTC28-205ENST00000469670 SMC4Q9NTJ3 1288 aa22.56■■□□□ 1.2
TTC28-205ENST00000469670 HMG20BQ9P0W2 317 aa22.56■■□□□ 1.2
TTC28-205ENST00000469670 PLXNB2O15031 1838 aa22.55■■□□□ 1.2
TTC28-205ENST00000469670 HERVK_113P62684 666 aa22.55■■□□□ 1.2
TTC28-205ENST00000469670 MDM2Q00987 491 aaPredicted RBP22.55■■□□□ 1.2
TTC28-205ENST00000469670 TFCP2Q12800 502 aa22.55■■□□□ 1.2
TTC28-205ENST00000469670 TBC1D9Q6ZT07 1266 aa22.55■■□□□ 1.2
TTC28-205ENST00000469670 TEX11Q8IYF3 940 aa22.55■■□□□ 1.2
TTC28-205ENST00000469670 CCND3P30281 292 aaPredicted RBP22.54■■□□□ 1.2
TTC28-205ENST00000469670 MAPK4P31152 587 aa22.54■■□□□ 1.2
TTC28-205ENST00000469670 LHX8Q68G74 356 aa22.54■■□□□ 1.2
TTC28-205ENST00000469670 PI16Q6UXB8 463 aa22.54■■□□□ 1.2
TTC28-205ENST00000469670 PHF6Q8IWS0 365 aaKnown RBP eCLIP22.54■■□□□ 1.2
TTC28-205ENST00000469670 SPATA5Q8NB90 893 aa22.54■■□□□ 1.2
TTC28-205ENST00000469670 RAI14Q9P0K7 980 aa22.54■■□□□ 1.2
TTC28-205ENST00000469670 PI4KBQ9UBF8 816 aa22.54■■□□□ 1.2
TTC28-205ENST00000469670 ASNSP08243 561 aa22.53■■□□□ 1.2
TTC28-205ENST00000469670 USP6NLQ92738 828 aa22.53■■□□□ 1.2
TTC28-205ENST00000469670 NEUROD6Q96NK8 337 aa22.53■■□□□ 1.2
TTC28-205ENST00000469670 RBPJLQ9UBG7 517 aa22.53■■□□□ 1.2
TTC28-205ENST00000469670 C19orf81C9J6K1 198 aa22.52■■□□□ 1.2
TTC28-205ENST00000469670 RGS2P41220 211 aa22.52■■□□□ 1.2
TTC28-205ENST00000469670 CCL14Q16627 93 aa22.52■■□□□ 1.2
TTC28-205ENST00000469670 Q3C1V9 767 aa22.52■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms