RNA–Protein interactions for RNA: ENST00000469560.1

PMPCB-207, Transcript of peptidase, mitochondrial processing beta subunit, humanhuman

TSL 2

Gene PMPCB, Length 1,615 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCB-207ENST00000469560 VPS33BQ9H267 617 aa8.43□□□□□ -1.06
PMPCB-207ENST00000469560 TTF2Q9UNY4 1162 aaKnown RBP8.43□□□□□ -1.06
PMPCB-207ENST00000469560 SIPA1L1O43166 1804 aa8.43□□□□□ -1.06
PMPCB-207ENST00000469560 FOCADQ5VW36 1801 aa8.43□□□□□ -1.06
PMPCB-207ENST00000469560 PATL2C9JE40 543 aaKnown RBP8.43□□□□□ -1.06
PMPCB-207ENST00000469560 WDHD1O75717 1129 aaPredicted RBP8.43□□□□□ -1.06
PMPCB-207ENST00000469560 SLC4A3P48751 1232 aa8.43□□□□□ -1.06
PMPCB-207ENST00000469560 CACNB3P54284 484 aa8.43□□□□□ -1.06
PMPCB-207ENST00000469560 HAND2P61296 217 aa8.43□□□□□ -1.06
PMPCB-207ENST00000469560 NFIAQ12857 509 aa8.43□□□□□ -1.06
PMPCB-207ENST00000469560 ALX1Q15699 326 aa8.43□□□□□ -1.06
PMPCB-207ENST00000469560 TSGA10IPQ3SY00 556 aa8.43□□□□□ -1.06
PMPCB-207ENST00000469560 ZSCAN25Q6NSZ9 544 aa8.43□□□□□ -1.06
PMPCB-207ENST00000469560 CASC1Q6TDU7 716 aa8.43□□□□□ -1.06
PMPCB-207ENST00000469560 TBC1D22AQ8WUA7 517 aa8.43□□□□□ -1.06
PMPCB-207ENST00000469560 TTC14Q96N46 770 aa8.43□□□□□ -1.06
PMPCB-207ENST00000469560 TMX4Q9H1E5 349 aaPredicted RBP8.43□□□□□ -1.06
PMPCB-207ENST00000469560 DCP1AQ9NPI6 582 aaPredicted RBP8.43□□□□□ -1.06
PMPCB-207ENST00000469560 ASTN2O75129 1339 aaPredicted RBP8.43□□□□□ -1.06
PMPCB-207ENST00000469560 KIF3CO14782 793 aa8.42□□□□□ -1.06
PMPCB-207ENST00000469560 EPB41L2O43491 1005 aaKnown RBP8.42□□□□□ -1.06
PMPCB-207ENST00000469560 DTNBO60941 627 aa8.42□□□□□ -1.06
PMPCB-207ENST00000469560 CRKP46108 304 aa8.42□□□□□ -1.06
PMPCB-207ENST00000469560 SPTY2D1Q68D10 685 aaPredicted RBP8.42□□□□□ -1.06
PMPCB-207ENST00000469560 CDC42EP5Q6NZY7 148 aa8.42□□□□□ -1.06
PMPCB-207ENST00000469560 CTR9Q6PD62 1173 aa8.42□□□□□ -1.06
PMPCB-207ENST00000469560 SH3BP5LQ7L8J4 393 aa8.42□□□□□ -1.06
PMPCB-207ENST00000469560 DZIP1Q86YF9 867 aaKnown RBP8.42□□□□□ -1.06
PMPCB-207ENST00000469560 NIM1KQ8IY84 436 aa8.42□□□□□ -1.06
PMPCB-207ENST00000469560 KHSRPQ92945 711 aaKnown RBP eCLIP8.42□□□□□ -1.06
PMPCB-207ENST00000469560 AIDAQ96BJ3 306 aa8.42□□□□□ -1.06
PMPCB-207ENST00000469560 TCEANC2Q96MN5 208 aa8.42□□□□□ -1.06
PMPCB-207ENST00000469560 HS3ST6Q96QI5 342 aa8.42□□□□□ -1.06
PMPCB-207ENST00000469560 UPF3BQ9BZI7 483 aaKnown RBP8.42□□□□□ -1.06
PMPCB-207ENST00000469560 GPHNQ9NQX3 736 aaPredicted RBP8.42□□□□□ -1.06
PMPCB-207ENST00000469560 SLC4A4Q9Y6R1 1079 aa8.42□□□□□ -1.06
PMPCB-207ENST00000469560 TIAM2Q8IVF5 1701 aa8.41□□□□□ -1.06
PMPCB-207ENST00000469560 ECM29Q5VYK3 1845 aa8.41□□□□□ -1.06
PMPCB-207ENST00000469560 TRAK2O60296 914 aa8.41□□□□□ -1.06
PMPCB-207ENST00000469560 USP17L8P0C7I0 530 aa8.41□□□□□ -1.06
PMPCB-207ENST00000469560 PLCD1P51178 756 aa8.41□□□□□ -1.06
PMPCB-207ENST00000469560 ANTXR2P58335 489 aa8.41□□□□□ -1.06
PMPCB-207ENST00000469560 CTDSPL2Q05D32 466 aa8.41□□□□□ -1.06
PMPCB-207ENST00000469560 SLC4A8Q2Y0W8 1093 aa8.41□□□□□ -1.06
PMPCB-207ENST00000469560 HHIPL2Q6UWX4 724 aa8.41□□□□□ -1.06
PMPCB-207ENST00000469560 ZGPATQ8N5A5 531 aaKnown RBP8.41□□□□□ -1.06
PMPCB-207ENST00000469560 ZDHHC15Q96MV8 337 aa8.41□□□□□ -1.06
PMPCB-207ENST00000469560 MRIQ9BWK5 157 aa8.41□□□□□ -1.06
PMPCB-207ENST00000469560 FAM198AQ9UFP1 575 aa8.41□□□□□ -1.06
PMPCB-207ENST00000469560 PGAP2Q9UHJ9 254 aa8.41□□□□□ -1.06
PMPCB-207ENST00000469560 SCAF8Q9UPN6 1271 aaKnown RBP8.41□□□□□ -1.06
PMPCB-207ENST00000469560 SUGT1Q9Y2Z0 365 aa8.41□□□□□ -1.06
PMPCB-207ENST00000469560 USP17L12C9JPN9 530 aa8.4□□□□□ -1.06
PMPCB-207ENST00000469560 USP17L21D6R901 530 aa8.4□□□□□ -1.06
PMPCB-207ENST00000469560 E7EWF7 191 aa8.4□□□□□ -1.06
PMPCB-207ENST00000469560 ZMYM6O95789 1325 aa8.4□□□□□ -1.06
PMPCB-207ENST00000469560 HOXB1P14653 301 aaPredicted RBP8.4□□□□□ -1.06
PMPCB-207ENST00000469560 LMNB1P20700 586 aa8.4□□□□□ -1.06
PMPCB-207ENST00000469560 NEDD4P46934 1319 aa8.4□□□□□ -1.06
PMPCB-207ENST00000469560 GMPSP49915 693 aaPredicted RBP8.4□□□□□ -1.06
PMPCB-207ENST00000469560 HIRAP54198 1017 aaPredicted RBP8.4□□□□□ -1.06
PMPCB-207ENST00000469560 EXOSC10Q01780 885 aaKnown RBP8.4□□□□□ -1.06
PMPCB-207ENST00000469560 ST3GAL1Q11201 340 aa8.4□□□□□ -1.06
PMPCB-207ENST00000469560 CFAP100Q494V2 611 aa8.4□□□□□ -1.06
PMPCB-207ENST00000469560 CIAPIN1Q6FI81 312 aa8.4□□□□□ -1.06
PMPCB-207ENST00000469560 KIAA1211Q6ZU35 1233 aa8.4□□□□□ -1.06
PMPCB-207ENST00000469560 MAPKAPK5Q8IW41 473 aa8.4□□□□□ -1.06
PMPCB-207ENST00000469560 TGFBRAP1Q8WUH2 860 aa8.4□□□□□ -1.06
PMPCB-207ENST00000469560 TBC1D2Q9BYX2 928 aa8.4□□□□□ -1.06
PMPCB-207ENST00000469560 SENP2Q9HC62 589 aa8.4□□□□□ -1.06
PMPCB-207ENST00000469560 ZSWIM6Q9HCJ5 1215 aa8.4□□□□□ -1.06
PMPCB-207ENST00000469560 CNTNAP1P78357 1384 aa8.4□□□□□ -1.07
PMPCB-207ENST00000469560 FLT1P17948 1338 aa8.4□□□□□ -1.07
PMPCB-207ENST00000469560 POTECB2RU33 542 aa8.4□□□□□ -1.07
PMPCB-207ENST00000469560 IRF6O14896 467 aa8.4□□□□□ -1.07
PMPCB-207ENST00000469560 DDNO94850 711 aaPredicted RBP8.4□□□□□ -1.07
PMPCB-207ENST00000469560 LARGE1O95461 756 aa8.4□□□□□ -1.07
PMPCB-207ENST00000469560 FGRP09769 529 aa8.4□□□□□ -1.07
PMPCB-207ENST00000469560 ZNF280AP59817 542 aaPredicted RBP8.4□□□□□ -1.07
PMPCB-207ENST00000469560 ANAPC15P60006 121 aa8.4□□□□□ -1.07
PMPCB-207ENST00000469560 MAP2K5Q13163 448 aa8.4□□□□□ -1.07
PMPCB-207ENST00000469560 AMHR2Q16671 573 aa8.4□□□□□ -1.07
PMPCB-207ENST00000469560 SHROOM1Q2M3G4 852 aaPredicted RBP8.4□□□□□ -1.07
PMPCB-207ENST00000469560 NBPF9Q3BBW0 867 aa8.4□□□□□ -1.07
PMPCB-207ENST00000469560 C9orf131Q5VYM1 1079 aa8.4□□□□□ -1.07
PMPCB-207ENST00000469560 DLK2Q6UY11 383 aa8.4□□□□□ -1.07
PMPCB-207ENST00000469560 CYB5R4Q7L1T6 521 aa8.4□□□□□ -1.07
PMPCB-207ENST00000469560 MB21D2Q8IYB1 491 aaPredicted RBP8.4□□□□□ -1.07
PMPCB-207ENST00000469560 STK11IPQ8N1F8 1099 aa8.4□□□□□ -1.07
PMPCB-207ENST00000469560 DYNLL2Q96FJ2 89 aa8.4□□□□□ -1.07
PMPCB-207ENST00000469560 TDRD3Q9H7E2 651 aaKnown RBP8.4□□□□□ -1.07
PMPCB-207ENST00000469560 SERPINA10Q9UK55 444 aa8.4□□□□□ -1.07
PMPCB-207ENST00000469560 NAV1Q8NEY1 1877 aa8.39□□□□□ -1.07
PMPCB-207ENST00000469560 A6NJR5 290 aa8.39□□□□□ -1.07
PMPCB-207ENST00000469560 SPDYE16A6NNV3 312 aaPredicted RBP8.39□□□□□ -1.07
PMPCB-207ENST00000469560 HDLBPQ00341 1268 aaKnown RBP8.39□□□□□ -1.07
PMPCB-207ENST00000469560 TOB2Q14106 344 aaPredicted RBP8.39□□□□□ -1.07
PMPCB-207ENST00000469560 RRP1BQ14684 758 aaKnown RBP8.39□□□□□ -1.07
PMPCB-207ENST00000469560 LRRFIP1Q32MZ4 808 aaKnown RBP8.39□□□□□ -1.07
PMPCB-207ENST00000469560 ARSIQ5FYB1 569 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms