RNA–Protein interactions for RNA: ENST00000469511.1

PTPN4-209, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 476 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-209ENST00000469511 CASP7P55210 303 aa6.8□□□□□ -1.32
PTPN4-209ENST00000469511 LSM11P83369 360 aaKnown RBP eCLIP6.8□□□□□ -1.32
PTPN4-209ENST00000469511 ARHGEF6Q15052 776 aa6.8□□□□□ -1.32
PTPN4-209ENST00000469511 TUSC1Q2TAM9 212 aa6.8□□□□□ -1.32
PTPN4-209ENST00000469511 SWT1Q5T5J6 900 aaKnown RBP6.8□□□□□ -1.32
PTPN4-209ENST00000469511 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.8□□□□□ -1.32
PTPN4-209ENST00000469511 DZIP1LQ8IYY4 767 aaKnown RBP6.8□□□□□ -1.32
PTPN4-209ENST00000469511 C7orf61Q8IZ16 206 aa6.8□□□□□ -1.32
PTPN4-209ENST00000469511 PI4KAP1Q8N8J0 262 aa6.8□□□□□ -1.32
PTPN4-209ENST00000469511 GOLGA6L2Q8N9W4 650 aaPredicted RBP6.8□□□□□ -1.32
PTPN4-209ENST00000469511 TTC28Q96AY4 2481 aa6.8□□□□□ -1.32
PTPN4-209ENST00000469511 ZNF594Q96JF6 807 aaPredicted RBP6.8□□□□□ -1.32
PTPN4-209ENST00000469511 DEFB118Q96PH6 123 aa6.8□□□□□ -1.32
PTPN4-209ENST00000469511 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.8□□□□□ -1.32
PTPN4-209ENST00000469511 BIN2Q9UBW5 565 aaPredicted RBP6.8□□□□□ -1.32
PTPN4-209ENST00000469511 PLXNB2O15031 1838 aa6.8□□□□□ -1.32
PTPN4-209ENST00000469511 PHIPQ8WWQ0 1821 aa6.79□□□□□ -1.32
PTPN4-209ENST00000469511 A0A1W2PPC1 479 aa6.79□□□□□ -1.32
PTPN4-209ENST00000469511 PDHXO00330 501 aa6.79□□□□□ -1.32
PTPN4-209ENST00000469511 MYO1BO43795 1136 aa6.79□□□□□ -1.32
PTPN4-209ENST00000469511 TFRCP02786 760 aaKnown RBP6.79□□□□□ -1.32
PTPN4-209ENST00000469511 CSF1RP07333 972 aa6.79□□□□□ -1.32
PTPN4-209ENST00000469511 BCRP11274 1271 aa6.79□□□□□ -1.32
PTPN4-209ENST00000469511 CETPP11597 493 aa6.79□□□□□ -1.32
PTPN4-209ENST00000469511 MAGEA10P43363 369 aaPredicted RBP6.79□□□□□ -1.32
PTPN4-209ENST00000469511 CRKP46108 304 aa6.79□□□□□ -1.32
PTPN4-209ENST00000469511 GYG1P46976 350 aa6.79□□□□□ -1.32
PTPN4-209ENST00000469511 KCNJ4P48050 445 aa6.79□□□□□ -1.32
PTPN4-209ENST00000469511 MMP14P50281 582 aa6.79□□□□□ -1.32
PTPN4-209ENST00000469511 EPHA10Q5JZY3 1008 aa6.79□□□□□ -1.32
PTPN4-209ENST00000469511 GPAT2Q6NUI2 795 aa6.79□□□□□ -1.32
PTPN4-209ENST00000469511 C15orf52Q6ZUT6 534 aaKnown RBP6.79□□□□□ -1.32
PTPN4-209ENST00000469511 MIGA2Q7L4E1 593 aa6.79□□□□□ -1.32
PTPN4-209ENST00000469511 ERO1BQ86YB8 467 aa6.79□□□□□ -1.32
PTPN4-209ENST00000469511 PROCA1Q8NCQ7 364 aaPredicted RBP6.79□□□□□ -1.32
PTPN4-209ENST00000469511 NKX2-3Q8TAU0 364 aa6.79□□□□□ -1.32
PTPN4-209ENST00000469511 FAM161BQ96MY7 647 aa6.79□□□□□ -1.32
PTPN4-209ENST00000469511 GUCD1Q96NT3 240 aa6.79□□□□□ -1.32
PTPN4-209ENST00000469511 WRNIP1Q96S55 665 aa6.79□□□□□ -1.32
PTPN4-209ENST00000469511 MPHOSPH8Q99549 860 aa6.79□□□□□ -1.32
PTPN4-209ENST00000469511 ANKRD2Q9GZV1 360 aa6.79□□□□□ -1.32
PTPN4-209ENST00000469511 POLR3EQ9NVU0 708 aa6.79□□□□□ -1.32
PTPN4-209ENST00000469511 TTF2Q9UNY4 1162 aaKnown RBP6.79□□□□□ -1.32
PTPN4-209ENST00000469511 IQSEC3Q9UPP2 1182 aaPredicted RBP6.79□□□□□ -1.32
PTPN4-209ENST00000469511 CSADQ9Y600 493 aa6.79□□□□□ -1.32
PTPN4-209ENST00000469511 FAM205AQ6ZU69 1335 aa6.78□□□□□ -1.32
PTPN4-209ENST00000469511 SPTLC1O15269 473 aa6.78□□□□□ -1.32
PTPN4-209ENST00000469511 HRO43593 1189 aa6.78□□□□□ -1.32
PTPN4-209ENST00000469511 ADCY3O60266 1144 aa6.78□□□□□ -1.32
PTPN4-209ENST00000469511 GNRH1P01148 92 aa6.78□□□□□ -1.32
PTPN4-209ENST00000469511 INHAP05111 366 aa6.78□□□□□ -1.32
PTPN4-209ENST00000469511 HSP90B1P14625 803 aaKnown RBP6.78□□□□□ -1.32
PTPN4-209ENST00000469511 BMP8BP34820 402 aa6.78□□□□□ -1.32
PTPN4-209ENST00000469511 GCGRP47871 477 aa6.78□□□□□ -1.32
PTPN4-209ENST00000469511 SLC4A3P48751 1232 aa6.78□□□□□ -1.32
PTPN4-209ENST00000469511 FLT3LGP49771 235 aa6.78□□□□□ -1.32
PTPN4-209ENST00000469511 PRMT2P55345 433 aa6.78□□□□□ -1.32
PTPN4-209ENST00000469511 FKBP1AP62942 108 aaKnown RBP6.78□□□□□ -1.32
PTPN4-209ENST00000469511 LMOD3Q0VAK6 560 aa6.78□□□□□ -1.32
PTPN4-209ENST00000469511 FLIIQ13045 1269 aa6.78□□□□□ -1.32
PTPN4-209ENST00000469511 TRIM32Q13049 653 aa6.78□□□□□ -1.32
PTPN4-209ENST00000469511 PPIL2Q13356 520 aa6.78□□□□□ -1.32
PTPN4-209ENST00000469511 SNAPC2Q13487 334 aa6.78□□□□□ -1.32
PTPN4-209ENST00000469511 MFSD14BQ5SR56 506 aa6.78□□□□□ -1.32
PTPN4-209ENST00000469511 ADGRD1Q6QNK2 874 aa6.78□□□□□ -1.32
PTPN4-209ENST00000469511 KSR2Q6VAB6 950 aa6.78□□□□□ -1.32
PTPN4-209ENST00000469511 SLF2Q8IX21 1173 aa6.78□□□□□ -1.32
PTPN4-209ENST00000469511 RDH13Q8NBN7 331 aa6.78□□□□□ -1.32
PTPN4-209ENST00000469511 TDRD7Q8NHU6 1098 aaKnown RBP6.78□□□□□ -1.32
PTPN4-209ENST00000469511 PNNQ9H307 717 aaKnown RBP6.78□□□□□ -1.32
PTPN4-209ENST00000469511 SPTBN5Q9NRC6 3674 aaKnown RBP6.77□□□□□ -1.33
PTPN4-209ENST00000469511 KDM4AO75164 1064 aa6.77□□□□□ -1.33
PTPN4-209ENST00000469511 USP46P62068 366 aa6.77□□□□□ -1.33
PTPN4-209ENST00000469511 UBXN2AP68543 259 aa6.77□□□□□ -1.33
PTPN4-209ENST00000469511 FOXO4P98177 505 aa6.77□□□□□ -1.33
PTPN4-209ENST00000469511 GCKRQ14397 625 aa6.77□□□□□ -1.33
PTPN4-209ENST00000469511 LRIT3Q3SXY7 679 aa6.77□□□□□ -1.33
PTPN4-209ENST00000469511 ANKRD23Q86SG2 305 aa6.77□□□□□ -1.33
PTPN4-209ENST00000469511 FAM84BQ96KN1 310 aaPredicted RBP6.77□□□□□ -1.33
PTPN4-209ENST00000469511 PLA2G12BQ9BX93 195 aa6.77□□□□□ -1.33
PTPN4-209ENST00000469511 PUS3Q9BZE2 481 aaKnown RBP6.77□□□□□ -1.33
PTPN4-209ENST00000469511 FRMD4AQ9P2Q2 1039 aaPredicted RBP6.77□□□□□ -1.33
PTPN4-209ENST00000469511 ADAMTS8Q9UP79 889 aa6.77□□□□□ -1.33
PTPN4-209ENST00000469511 VCANP13611 3396 aa6.77□□□□□ -1.33
PTPN4-209ENST00000469511 MYO9BQ13459 2157 aa6.76□□□□□ -1.33
PTPN4-209ENST00000469511 HOXD10P28358 340 aa6.76□□□□□ -1.33
PTPN4-209ENST00000469511 TNFAIP1Q13829 316 aa6.76□□□□□ -1.33
PTPN4-209ENST00000469511 ZNF804AQ7Z570 1209 aa6.76□□□□□ -1.33
PTPN4-209ENST00000469511 CCDC84Q86UT8 332 aaPredicted RBP6.76□□□□□ -1.33
PTPN4-209ENST00000469511 TDHQ8IZJ6 230 aa6.76□□□□□ -1.33
PTPN4-209ENST00000469511 MRPL50Q8N5N7 158 aaKnown RBP6.76□□□□□ -1.33
PTPN4-209ENST00000469511 RUNDC1Q96C34 613 aa6.76□□□□□ -1.33
PTPN4-209ENST00000469511 ZFRQ96KR1 1074 aaKnown RBP6.76□□□□□ -1.33
PTPN4-209ENST00000469511 ZCCHC17Q9NP64 241 aaKnown RBP6.76□□□□□ -1.33
PTPN4-209ENST00000469511 PAK6Q9NQU5 681 aaPredicted RBP6.76□□□□□ -1.33
PTPN4-209ENST00000469511 PRDM6Q9NQX0 595 aa6.76□□□□□ -1.33
PTPN4-209ENST00000469511 LIMD1Q9UGP4 676 aa6.76□□□□□ -1.33
PTPN4-209ENST00000469511 SERPINA10Q9UK55 444 aa6.76□□□□□ -1.33
PTPN4-209ENST00000469511 KCNH4Q9UQ05 1017 aa6.76□□□□□ -1.33
PTPN4-209ENST00000469511 MYH13Q9UKX3 1938 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms