RNA–Protein interactions for RNA: ENST00000468136.5

MSH5-213, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 690 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-213ENST00000468136 SEC23AQ15436 765 aa11.87□□□□□ -0.51
MSH5-213ENST00000468136 RRP12Q5JTH9 1297 aaKnown RBP11.87□□□□□ -0.51
MSH5-213ENST00000468136 IFIT1BQ5T764 474 aaKnown RBP11.87□□□□□ -0.51
MSH5-213ENST00000468136 FOXD4L5Q5VV16 416 aaPredicted RBP11.87□□□□□ -0.51
MSH5-213ENST00000468136 DGKHQ86XP1 1220 aa11.87□□□□□ -0.51
MSH5-213ENST00000468136 RTKN2Q8IZC4 609 aa11.87□□□□□ -0.51
MSH5-213ENST00000468136 FOXD4L4Q8WXT5 416 aaPredicted RBP11.87□□□□□ -0.51
MSH5-213ENST00000468136 DDX11Q96FC9 970 aa11.87□□□□□ -0.51
MSH5-213ENST00000468136 TNKSO95271 1327 aa11.86□□□□□ -0.51
MSH5-213ENST00000468136 MYO3BQ8WXR4 1341 aa11.86□□□□□ -0.51
MSH5-213ENST00000468136 C10orf71Q711Q0 1435 aa11.86□□□□□ -0.51
MSH5-213ENST00000468136 GOLGA6L4A6NEF3 574 aa11.86□□□□□ -0.51
MSH5-213ENST00000468136 RANBP6O60518 1105 aaKnown RBP11.86□□□□□ -0.51
MSH5-213ENST00000468136 FMNL1O95466 1100 aaPredicted RBP11.86□□□□□ -0.51
MSH5-213ENST00000468136 BTDP43251 543 aa11.86□□□□□ -0.51
MSH5-213ENST00000468136 GNAQP50148 359 aa11.86□□□□□ -0.51
MSH5-213ENST00000468136 MMP14P50281 582 aa11.86□□□□□ -0.51
MSH5-213ENST00000468136 GTF2IP78347 998 aa11.86□□□□□ -0.51
MSH5-213ENST00000468136 DNM1Q05193 864 aaKnown RBP11.86□□□□□ -0.51
MSH5-213ENST00000468136 TTC6Q86TZ1 520 aa11.86□□□□□ -0.51
MSH5-213ENST00000468136 TEX11Q8IYF3 940 aa11.86□□□□□ -0.51
MSH5-213ENST00000468136 ZNF654Q8IZM8 581 aa11.86□□□□□ -0.51
MSH5-213ENST00000468136 RNF26Q9BY78 433 aaPredicted RBP11.86□□□□□ -0.51
MSH5-213ENST00000468136 DEXIO95424 95 aa11.85□□□□□ -0.51
MSH5-213ENST00000468136 POLR3DP05423 398 aaPredicted RBP11.85□□□□□ -0.51
MSH5-213ENST00000468136 FDPSP14324 419 aaKnown RBP11.85□□□□□ -0.51
MSH5-213ENST00000468136 KIF5BP33176 963 aa11.85□□□□□ -0.51
MSH5-213ENST00000468136 AKAP17AQ02040 695 aaKnown RBP11.85□□□□□ -0.51
MSH5-213ENST00000468136 SAFBQ15424 915 aaKnown RBP eCLIP11.85□□□□□ -0.51
MSH5-213ENST00000468136 NTRK3Q16288 839 aa11.85□□□□□ -0.51
MSH5-213ENST00000468136 CCDC183Q5T5S1 534 aa11.85□□□□□ -0.51
MSH5-213ENST00000468136 MSL1Q68DK7 614 aa11.85□□□□□ -0.51
MSH5-213ENST00000468136 MICU3Q86XE3 530 aa11.85□□□□□ -0.51
MSH5-213ENST00000468136 ZNF444Q8N0Y2 327 aaPredicted RBP11.85□□□□□ -0.51
MSH5-213ENST00000468136 FANCBQ8NB91 859 aa11.85□□□□□ -0.51
MSH5-213ENST00000468136 GPT2Q8TD30 523 aa11.85□□□□□ -0.51
MSH5-213ENST00000468136 C7orf43Q8WVR3 580 aa11.85□□□□□ -0.51
MSH5-213ENST00000468136 TEKT1Q969V4 418 aa11.85□□□□□ -0.51
MSH5-213ENST00000468136 SPATA32Q96LK8 384 aa11.85□□□□□ -0.51
MSH5-213ENST00000468136 MKNK2Q9HBH9 465 aa11.85□□□□□ -0.51
MSH5-213ENST00000468136 NCOA5Q9HCD5 579 aaKnown RBP11.85□□□□□ -0.51
MSH5-213ENST00000468136 SWAP70Q9UH65 585 aa11.85□□□□□ -0.51
MSH5-213ENST00000468136 CNPY2Q9Y2B0 182 aa11.85□□□□□ -0.51
MSH5-213ENST00000468136 TSPY2A6NKD2 308 aa11.84□□□□□ -0.51
MSH5-213ENST00000468136 FIBPO43427 364 aa11.84□□□□□ -0.51
MSH5-213ENST00000468136 TGFB2P61812 414 aa11.84□□□□□ -0.51
MSH5-213ENST00000468136 KIAA2012Q0VF49 1180 aa11.84□□□□□ -0.51
MSH5-213ENST00000468136 CCDC93Q567U6 631 aa11.84□□□□□ -0.51
MSH5-213ENST00000468136 CAVIN1Q6NZI2 390 aaKnown RBP11.84□□□□□ -0.51
MSH5-213ENST00000468136 TTLL6Q8N841 843 aa11.84□□□□□ -0.51
MSH5-213ENST00000468136 ENAHQ8N8S7 591 aaPredicted RBP11.84□□□□□ -0.51
MSH5-213ENST00000468136 CTCFLQ8NI51 663 aaPredicted RBP11.84□□□□□ -0.51
MSH5-213ENST00000468136 SH3RF3Q8TEJ3 882 aaPredicted RBP11.84□□□□□ -0.51
MSH5-213ENST00000468136 PSMD1Q99460 953 aa11.84□□□□□ -0.51
MSH5-213ENST00000468136 LZTS2Q9BRK4 669 aa11.84□□□□□ -0.51
MSH5-213ENST00000468136 ALG1Q9BT22 464 aa11.84□□□□□ -0.51
MSH5-213ENST00000468136 GPHNQ9NQX3 736 aaPredicted RBP11.84□□□□□ -0.51
MSH5-213ENST00000468136 LAMB1P07942 1786 aa11.84□□□□□ -0.51
MSH5-213ENST00000468136 COL11A2P13942 1736 aaPredicted RBP11.83□□□□□ -0.52
MSH5-213ENST00000468136 USP17L3A6NCW0 530 aa11.83□□□□□ -0.52
MSH5-213ENST00000468136 USP17L4A6NCW7 530 aa11.83□□□□□ -0.52
MSH5-213ENST00000468136 RIMBP2O15034 1052 aa11.83□□□□□ -0.52
MSH5-213ENST00000468136 YEATS4O95619 227 aa11.83□□□□□ -0.52
MSH5-213ENST00000468136 ADD1P35611 737 aaKnown RBP11.83□□□□□ -0.52
MSH5-213ENST00000468136 RHBDL3P58872 404 aa11.83□□□□□ -0.52
MSH5-213ENST00000468136 DIXDC1Q155Q3 683 aa11.83□□□□□ -0.52
MSH5-213ENST00000468136 ZSCAN23Q3MJ62 389 aa11.83□□□□□ -0.52
MSH5-213ENST00000468136 C16orf86Q6ZW13 317 aa11.83□□□□□ -0.52
MSH5-213ENST00000468136 USP17L1Q7RTZ2 530 aa11.83□□□□□ -0.52
MSH5-213ENST00000468136 CRACR2BQ8N4Y2 399 aaPredicted RBP11.83□□□□□ -0.52
MSH5-213ENST00000468136 KCNG4Q8TDN1 519 aa11.83□□□□□ -0.52
MSH5-213ENST00000468136 TGFBRAP1Q8WUH2 860 aa11.83□□□□□ -0.52
MSH5-213ENST00000468136 ZDHHC15Q96MV8 337 aa11.83□□□□□ -0.52
MSH5-213ENST00000468136 GZF1Q9H116 711 aaPredicted RBP11.83□□□□□ -0.52
MSH5-213ENST00000468136 FAM217BQ9NTX9 383 aaPredicted RBP11.83□□□□□ -0.52
MSH5-213ENST00000468136 RCOR1Q9UKL0 485 aa11.83□□□□□ -0.52
MSH5-213ENST00000468136 TTF2Q9UNY4 1162 aaKnown RBP11.83□□□□□ -0.52
MSH5-213ENST00000468136 DAGLAQ9Y4D2 1042 aa11.83□□□□□ -0.52
MSH5-213ENST00000468136 MYH2Q9UKX2 1941 aa11.82□□□□□ -0.52
MSH5-213ENST00000468136 PRPF3O43395 683 aaKnown RBP11.82□□□□□ -0.52
MSH5-213ENST00000468136 POLD1P28340 1107 aa11.82□□□□□ -0.52
MSH5-213ENST00000468136 SMARCA1P28370 1054 aa11.82□□□□□ -0.52
MSH5-213ENST00000468136 CDC27P30260 824 aa11.82□□□□□ -0.52
MSH5-213ENST00000468136 LRSAM1Q6UWE0 723 aa11.82□□□□□ -0.52
MSH5-213ENST00000468136 FERMT3Q86UX7 667 aa11.82□□□□□ -0.52
MSH5-213ENST00000468136 JMYQ8N9B5 988 aa11.82□□□□□ -0.52
MSH5-213ENST00000468136 LEO1Q8WVC0 666 aaPredicted RBP11.82□□□□□ -0.52
MSH5-213ENST00000468136 ANP32BQ92688 251 aaKnown RBP11.82□□□□□ -0.52
MSH5-213ENST00000468136 GPR101Q96P66 508 aaPredicted RBP11.82□□□□□ -0.52
MSH5-213ENST00000468136 DHX36Q9H2U1 1008 aaKnown RBP11.82□□□□□ -0.52
MSH5-213ENST00000468136 DDX19AQ9NUU7 478 aaKnown RBP11.82□□□□□ -0.52
MSH5-213ENST00000468136 POLR3EQ9NVU0 708 aa11.82□□□□□ -0.52
MSH5-213ENST00000468136 RTEL1Q9NZ71 1219 aa11.82□□□□□ -0.52
MSH5-213ENST00000468136 SERPINA10Q9UK55 444 aa11.82□□□□□ -0.52
MSH5-213ENST00000468136 TACC3Q9Y6A5 838 aa11.82□□□□□ -0.52
MSH5-213ENST00000468136 MORC2Q9Y6X9 1032 aaPredicted RBP11.82□□□□□ -0.52
MSH5-213ENST00000468136 FLT1P17948 1338 aa11.82□□□□□ -0.52
MSH5-213ENST00000468136 HLA-DOAP06340 250 aa11.81□□□□□ -0.52
MSH5-213ENST00000468136 USP17L8P0C7I0 530 aa11.81□□□□□ -0.52
MSH5-213ENST00000468136 TSPY3P0CV98 308 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms