RNA–Protein interactions for RNA: ENST00000468105.5

RPP40-204, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 2

Gene RPP40, Length 632 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-204ENST00000468105 TRIB2Q92519 343 aa16.9■□□□□ 0.3
RPP40-204ENST00000468105 CDCA7LQ96GN5 454 aa16.9■□□□□ 0.3
RPP40-204ENST00000468105 MTMR10Q9NXD2 777 aa16.9■□□□□ 0.3
RPP40-204ENST00000468105 BTDP43251 543 aa16.89■□□□□ 0.29
RPP40-204ENST00000468105 FAM110CQ1W6H9 321 aa16.89■□□□□ 0.29
RPP40-204ENST00000468105 SHROOM1Q2M3G4 852 aaPredicted RBP16.89■□□□□ 0.29
RPP40-204ENST00000468105 CCDC102BQ68D86 513 aa16.89■□□□□ 0.29
RPP40-204ENST00000468105 ZSCAN29Q8IWY8 852 aaPredicted RBP16.89■□□□□ 0.29
RPP40-204ENST00000468105 LRRFIP2Q9Y608 721 aaKnown RBP16.89■□□□□ 0.29
RPP40-204ENST00000468105 TIMM10P62072 90 aa16.88■□□□□ 0.29
RPP40-204ENST00000468105 SPP2Q13103 211 aa16.88■□□□□ 0.29
RPP40-204ENST00000468105 SIPA1L1O43166 1804 aa16.88■□□□□ 0.29
RPP40-204ENST00000468105 ATAD5Q96QE3 1844 aa16.87■□□□□ 0.29
RPP40-204ENST00000468105 HMGCS2P54868 508 aa16.87■□□□□ 0.29
RPP40-204ENST00000468105 LRIT3Q3SXY7 679 aa16.87■□□□□ 0.29
RPP40-204ENST00000468105 PI16Q6UXB8 463 aa16.87■□□□□ 0.29
RPP40-204ENST00000468105 COA7Q96BR5 231 aa16.87■□□□□ 0.29
RPP40-204ENST00000468105 FAM163AQ96GL9 167 aaPredicted RBP16.87■□□□□ 0.29
RPP40-204ENST00000468105 TXNRD2Q9NNW7 524 aa16.87■□□□□ 0.29
RPP40-204ENST00000468105 CIAO1O76071 339 aa16.86■□□□□ 0.29
RPP40-204ENST00000468105 HMGCRP04035 888 aa16.86■□□□□ 0.29
RPP40-204ENST00000468105 MAP3K21Q5TCX8 1036 aa16.86■□□□□ 0.29
RPP40-204ENST00000468105 COL25A1Q9BXS0 654 aaPredicted RBP16.86■□□□□ 0.29
RPP40-204ENST00000468105 ASCC2Q9H1I8 757 aaPredicted RBP16.86■□□□□ 0.29
RPP40-204ENST00000468105 OGDHLQ9ULD0 1010 aa16.86■□□□□ 0.29
RPP40-204ENST00000468105 DENND2AQ9ULE3 1009 aa16.86■□□□□ 0.29
RPP40-204ENST00000468105 CDH23Q9H251 3354 aa16.85■□□□□ 0.29
RPP40-204ENST00000468105 GPR75-ASB3A0A0A6YYF3 556 aa16.85■□□□□ 0.29
RPP40-204ENST00000468105 MECOMQ03112 1051 aa16.85■□□□□ 0.29
RPP40-204ENST00000468105 ANKLE1Q8NAG6 615 aa16.85■□□□□ 0.29
RPP40-204ENST00000468105 NBPF3Q9H094 633 aa16.85■□□□□ 0.29
RPP40-204ENST00000468105 C11orf49Q9H6J7 331 aa16.85■□□□□ 0.29
RPP40-204ENST00000468105 CEP126Q9P2H0 1117 aa16.85■□□□□ 0.29
RPP40-204ENST00000468105 ABCF2Q9UG63 623 aa16.85■□□□□ 0.29
RPP40-204ENST00000468105 STXBP5LQ9Y2K9 1186 aa16.85■□□□□ 0.29
RPP40-204ENST00000468105 MROH7-TTC4A0A0A0MT08 1334 aa16.85■□□□□ 0.29
RPP40-204ENST00000468105 PTPRCP08575 1304 aa16.85■□□□□ 0.29
RPP40-204ENST00000468105 RPTORQ8N122 1335 aa16.85■□□□□ 0.29
RPP40-204ENST00000468105 PRUNE2Q8WUY3 3088 aa16.85■□□□□ 0.29
RPP40-204ENST00000468105 SEMA3EO15041 775 aa16.84■□□□□ 0.29
RPP40-204ENST00000468105 ZBTB22O15209 634 aa16.84■□□□□ 0.29
RPP40-204ENST00000468105 TBC1D12O60347 775 aa16.84■□□□□ 0.29
RPP40-204ENST00000468105 COL6A1P12109 1028 aa16.84■□□□□ 0.29
RPP40-204ENST00000468105 CYP2B6P20813 491 aa16.84■□□□□ 0.29
RPP40-204ENST00000468105 GPR153Q6NV75 609 aa16.84■□□□□ 0.29
RPP40-204ENST00000468105 TBC1D9Q6ZT07 1266 aa16.84■□□□□ 0.29
RPP40-204ENST00000468105 TDHQ8IZJ6 230 aa16.84■□□□□ 0.29
RPP40-204ENST00000468105 PROCA1Q8NCQ7 364 aaPredicted RBP16.84■□□□□ 0.29
RPP40-204ENST00000468105 HMX1Q9NP08 348 aaPredicted RBP16.84■□□□□ 0.29
RPP40-204ENST00000468105 CCL14Q16627 93 aa16.83■□□□□ 0.28
RPP40-204ENST00000468105 LRRC26Q2I0M4 334 aa16.83■□□□□ 0.28
RPP40-204ENST00000468105 Q3C1V9 767 aa16.83■□□□□ 0.28
RPP40-204ENST00000468105 LHX8Q68G74 356 aa16.83■□□□□ 0.28
RPP40-204ENST00000468105 ZNF280CQ8ND82 737 aa16.83■□□□□ 0.28
RPP40-204ENST00000468105 GUCD1Q96NT3 240 aa16.83■□□□□ 0.28
RPP40-204ENST00000468105 P2RX7Q99572 595 aaKnown RBP16.83■□□□□ 0.28
RPP40-204ENST00000468105 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.83■□□□□ 0.28
RPP40-204ENST00000468105 PRKAR2AP13861 404 aaKnown RBP16.82■□□□□ 0.28
RPP40-204ENST00000468105 CCND3P30281 292 aaPredicted RBP16.82■□□□□ 0.28
RPP40-204ENST00000468105 CAP2P40123 477 aa16.82■□□□□ 0.28
RPP40-204ENST00000468105 SH3D19Q5HYK7 790 aa16.82■□□□□ 0.28
RPP40-204ENST00000468105 DZIP1Q86YF9 867 aaKnown RBP16.82■□□□□ 0.28
RPP40-204ENST00000468105 USP6NLQ92738 828 aa16.82■□□□□ 0.28
RPP40-204ENST00000468105 DNAJC18Q9H819 358 aa16.82■□□□□ 0.28
RPP40-204ENST00000468105 GNL3LQ9NVN8 582 aaKnown RBP16.82■□□□□ 0.28
RPP40-204ENST00000468105 MORF4L1Q9UBU8 362 aa16.82■□□□□ 0.28
RPP40-204ENST00000468105 CT47B1P0C2W7 299 aaPredicted RBP16.81■□□□□ 0.28
RPP40-204ENST00000468105 IL15P40933 162 aaPredicted RBP16.81■□□□□ 0.28
RPP40-204ENST00000468105 CACNB2Q08289 660 aaPredicted RBP16.81■□□□□ 0.28
RPP40-204ENST00000468105 NSUN4Q96CB9 384 aaKnown RBP16.81■□□□□ 0.28
RPP40-204ENST00000468105 XAGE2Q96GT9 111 aa16.81■□□□□ 0.28
RPP40-204ENST00000468105 UBE2OQ9C0C9 1292 aaKnown RBP16.81■□□□□ 0.28
RPP40-204ENST00000468105 OSBPL5Q9H0X9 879 aaPredicted RBP16.81■□□□□ 0.28
RPP40-204ENST00000468105 PORCNQ9H237 461 aa16.81■□□□□ 0.28
RPP40-204ENST00000468105 COPRSQ9NQ92 184 aa16.81■□□□□ 0.28
RPP40-204ENST00000468105 HMG20BQ9P0W2 317 aa16.81■□□□□ 0.28
RPP40-204ENST00000468105 RBPJLQ9UBG7 517 aa16.81■□□□□ 0.28
RPP40-204ENST00000468105 COL2A1P02458 1487 aaPredicted RBP16.8■□□□□ 0.28
RPP40-204ENST00000468105 A0A1B0GUL7 405 aa16.8■□□□□ 0.28
RPP40-204ENST00000468105 CAPN2P17655 700 aa16.8■□□□□ 0.28
RPP40-204ENST00000468105 GCLCP48506 637 aaPredicted RBP16.8■□□□□ 0.28
RPP40-204ENST00000468105 MDM2Q00987 491 aaPredicted RBP16.8■□□□□ 0.28
RPP40-204ENST00000468105 TFCP2Q12800 502 aa16.8■□□□□ 0.28
RPP40-204ENST00000468105 FBXO3Q9UK99 471 aa16.8■□□□□ 0.28
RPP40-204ENST00000468105 PNMA3Q9UL41 463 aa16.8■□□□□ 0.28
RPP40-204ENST00000468105 PDS5AQ29RF7 1337 aaKnown RBP16.79■□□□□ 0.28
RPP40-204ENST00000468105 POTEB2H3BUK9 544 aa16.79■□□□□ 0.28
RPP40-204ENST00000468105 NPM3O75607 178 aaKnown RBP16.79■□□□□ 0.28
RPP40-204ENST00000468105 MTMR2Q13614 643 aa16.79■□□□□ 0.28
RPP40-204ENST00000468105 SH3RF3Q8TEJ3 882 aaPredicted RBP16.79■□□□□ 0.28
RPP40-204ENST00000468105 MEIS3Q99687 375 aa16.79■□□□□ 0.28
RPP40-204ENST00000468105 FRMPD3Q5JV73 1810 aa16.78■□□□□ 0.28
RPP40-204ENST00000468105 USP17L5A8MUK1 530 aa16.78■□□□□ 0.28
RPP40-204ENST00000468105 UBTFL1P0CB47 393 aaPredicted RBP16.78■□□□□ 0.28
RPP40-204ENST00000468105 FAM161BQ96MY7 647 aa16.78■□□□□ 0.28
RPP40-204ENST00000468105 FLRT1Q9NZU1 646 aa16.78■□□□□ 0.28
RPP40-204ENST00000468105 MORN1Q5T089 497 aa16.77■□□□□ 0.28
RPP40-204ENST00000468105 ERICH6Q7L0X2 663 aa16.77■□□□□ 0.28
RPP40-204ENST00000468105 ADGRA1Q86SQ6 560 aa16.77■□□□□ 0.28
RPP40-204ENST00000468105 ZGPATQ8N5A5 531 aaKnown RBP16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms