RNA–Protein interactions for RNA: ENST00000467124.1

VPS13A-209, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 5

Gene VPS13A, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-209ENST00000467124 MEGF11A6BM72 1044 aa6.05□□□□□ -1.44
VPS13A-209ENST00000467124 DNAJA2O60884 412 aa6.05□□□□□ -1.44
VPS13A-209ENST00000467124 ATE1O95260 518 aa6.05□□□□□ -1.44
VPS13A-209ENST00000467124 HTR3BO95264 441 aa6.05□□□□□ -1.44
VPS13A-209ENST00000467124 SLFN14P0C7P3 912 aa6.05□□□□□ -1.44
VPS13A-209ENST00000467124 TRIM28Q13263 835 aaKnown RBP6.05□□□□□ -1.44
VPS13A-209ENST00000467124 TNNI3KQ59H18 835 aa6.05□□□□□ -1.44
VPS13A-209ENST00000467124 IGF2-ASQ6U949 168 aa6.05□□□□□ -1.44
VPS13A-209ENST00000467124 HDXQ7Z353 690 aa6.05□□□□□ -1.44
VPS13A-209ENST00000467124 UBASH3BQ8TF42 649 aa6.05□□□□□ -1.44
VPS13A-209ENST00000467124 DNAJC7Q99615 494 aa6.05□□□□□ -1.44
VPS13A-209ENST00000467124 RNF208Q9H0X6 261 aa6.05□□□□□ -1.44
VPS13A-209ENST00000467124 REV1Q9UBZ9 1251 aa6.05□□□□□ -1.44
VPS13A-209ENST00000467124 SBNO2Q9Y2G9 1366 aa6.05□□□□□ -1.44
VPS13A-209ENST00000467124 PRR36Q9H6K5 1346 aa6.04□□□□□ -1.44
VPS13A-209ENST00000467124 GFRA2O00451 464 aa6.04□□□□□ -1.44
VPS13A-209ENST00000467124 DDAH1O94760 285 aa6.04□□□□□ -1.44
VPS13A-209ENST00000467124 SPATA31C1P0DKV0 1188 aa6.04□□□□□ -1.44
VPS13A-209ENST00000467124 PLCG1P19174 1290 aa6.04□□□□□ -1.44
VPS13A-209ENST00000467124 INSM1Q01101 510 aaPredicted RBP6.04□□□□□ -1.44
VPS13A-209ENST00000467124 MLECQ14165 292 aa6.04□□□□□ -1.44
VPS13A-209ENST00000467124 DDR2Q16832 855 aa6.04□□□□□ -1.44
VPS13A-209ENST00000467124 DUOXA2Q1HG44 320 aa6.04□□□□□ -1.44
VPS13A-209ENST00000467124 EXOSC6Q5RKV6 272 aaKnown RBP6.04□□□□□ -1.44
VPS13A-209ENST00000467124 BEND7Q8N7W2 519 aaPredicted RBP6.04□□□□□ -1.44
VPS13A-209ENST00000467124 ZSCAN1Q8NBB4 408 aa6.04□□□□□ -1.44
VPS13A-209ENST00000467124 RNPC3Q96LT9 517 aaKnown RBP6.04□□□□□ -1.44
VPS13A-209ENST00000467124 PLVAPQ9BX97 442 aa6.04□□□□□ -1.44
VPS13A-209ENST00000467124 TMPRSS13Q9BYE2 586 aa6.04□□□□□ -1.44
VPS13A-209ENST00000467124 EHMT1Q9H9B1 1298 aa6.04□□□□□ -1.44
VPS13A-209ENST00000467124 FAM86C1Q9NVL1 165 aa6.04□□□□□ -1.44
VPS13A-209ENST00000467124 PFDN2Q9UHV9 154 aa6.04□□□□□ -1.44
VPS13A-209ENST00000467124 PCDHB10Q9UN67 800 aa6.04□□□□□ -1.44
VPS13A-209ENST00000467124 MAPK8IP1Q9UQF2 711 aa6.04□□□□□ -1.44
VPS13A-209ENST00000467124 AOC2O75106 756 aa6.03□□□□□ -1.44
VPS13A-209ENST00000467124 GJB6O95452 261 aa6.03□□□□□ -1.44
VPS13A-209ENST00000467124 GRK4P32298 578 aa6.03□□□□□ -1.44
VPS13A-209ENST00000467124 CHMP4BP1P59074 171 aa6.03□□□□□ -1.44
VPS13A-209ENST00000467124 ERVK-24P63145 666 aa6.03□□□□□ -1.44
VPS13A-209ENST00000467124 SNRPNP63162 240 aaKnown RBP6.03□□□□□ -1.44
VPS13A-209ENST00000467124 PDE4BQ07343 736 aa6.03□□□□□ -1.44
VPS13A-209ENST00000467124 ZYXQ15942 572 aaKnown RBP6.03□□□□□ -1.44
VPS13A-209ENST00000467124 LRRFIP1Q32MZ4 808 aaKnown RBP6.03□□□□□ -1.44
VPS13A-209ENST00000467124 ZC3H12AQ5D1E8 599 aaKnown RBP6.03□□□□□ -1.44
VPS13A-209ENST00000467124 AKAP4Q5JQC9 854 aa6.03□□□□□ -1.44
VPS13A-209ENST00000467124 PPM1JQ5JR12 505 aa6.03□□□□□ -1.44
VPS13A-209ENST00000467124 OVOS1Q6IE37 1185 aa6.03□□□□□ -1.44
VPS13A-209ENST00000467124 C6orf15Q6UXA7 325 aaPredicted RBP6.03□□□□□ -1.44
VPS13A-209ENST00000467124 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.03□□□□□ -1.44
VPS13A-209ENST00000467124 TTC6Q86TZ1 520 aa6.03□□□□□ -1.44
VPS13A-209ENST00000467124 LILRB2Q8N423 598 aa6.03□□□□□ -1.44
VPS13A-209ENST00000467124 RBBP8NLQ8NC74 664 aaPredicted RBP6.03□□□□□ -1.44
VPS13A-209ENST00000467124 NACC1Q96RE7 527 aa6.03□□□□□ -1.44
VPS13A-209ENST00000467124 WDR18Q9BV38 432 aa6.03□□□□□ -1.44
VPS13A-209ENST00000467124 RUSC1Q9BVN2 902 aa6.03□□□□□ -1.44
VPS13A-209ENST00000467124 CYP4F12Q9HCS2 524 aa6.03□□□□□ -1.44
VPS13A-209ENST00000467124 PICK1Q9NRD5 415 aa6.03□□□□□ -1.44
VPS13A-209ENST00000467124 RAD18Q9NS91 495 aa6.03□□□□□ -1.44
VPS13A-209ENST00000467124 PCDHGC5Q9Y5F6 944 aa6.03□□□□□ -1.44
VPS13A-209ENST00000467124 A0A1W2PQH9 124 aa6.02□□□□□ -1.45
VPS13A-209ENST00000467124 UPK3BL1B0FP48 263 aa6.02□□□□□ -1.45
VPS13A-209ENST00000467124 CHURC1-FNTBB4DL54 471 aa6.02□□□□□ -1.45
VPS13A-209ENST00000467124 UPK3BL2E5RIL1 263 aa6.02□□□□□ -1.45
VPS13A-209ENST00000467124 CANXP27824 592 aaKnown RBP6.02□□□□□ -1.45
VPS13A-209ENST00000467124 POLR2BP30876 1174 aaKnown RBP6.02□□□□□ -1.45
VPS13A-209ENST00000467124 ID3Q02535 119 aa6.02□□□□□ -1.45
VPS13A-209ENST00000467124 EGFLAMQ63HQ2 1017 aa6.02□□□□□ -1.45
VPS13A-209ENST00000467124 ANKRD34AQ69YU3 496 aa6.02□□□□□ -1.45
VPS13A-209ENST00000467124 TMEM130Q8N3G9 435 aa6.02□□□□□ -1.45
VPS13A-209ENST00000467124 SMG8Q8ND04 991 aaKnown RBP6.02□□□□□ -1.45
VPS13A-209ENST00000467124 SH3TC2Q8TF17 1288 aa6.02□□□□□ -1.45
VPS13A-209ENST00000467124 MKL1Q969V6 931 aa6.02□□□□□ -1.45
VPS13A-209ENST00000467124 SCARF2Q96GP6 870 aaPredicted RBP6.02□□□□□ -1.45
VPS13A-209ENST00000467124 ADAM30Q9UKF2 790 aa6.02□□□□□ -1.45
VPS13A-209ENST00000467124 MEIS3P2A8K0S8 358 aa6.01□□□□□ -1.45
VPS13A-209ENST00000467124 FAM229AH3BQW9 127 aa6.01□□□□□ -1.45
VPS13A-209ENST00000467124 FANCGO15287 622 aa6.01□□□□□ -1.45
VPS13A-209ENST00000467124 PDPK1O15530 556 aa6.01□□□□□ -1.45
VPS13A-209ENST00000467124 WISP1O95388 367 aa6.01□□□□□ -1.45
VPS13A-209ENST00000467124 PGRP06401 933 aa6.01□□□□□ -1.45
VPS13A-209ENST00000467124 ETF1P62495 437 aaKnown RBP6.01□□□□□ -1.45
VPS13A-209ENST00000467124 NRG1Q02297 640 aaPredicted RBP6.01□□□□□ -1.45
VPS13A-209ENST00000467124 IFRD2Q12894 506 aaPredicted RBP6.01□□□□□ -1.45
VPS13A-209ENST00000467124 FXNQ16595 210 aa6.01□□□□□ -1.45
VPS13A-209ENST00000467124 ARSHQ5FYA8 562 aa6.01□□□□□ -1.45
VPS13A-209ENST00000467124 NUTM2GQ5VZR2 741 aa6.01□□□□□ -1.45
VPS13A-209ENST00000467124 ACAD11Q709F0 780 aa6.01□□□□□ -1.45
VPS13A-209ENST00000467124 CYFIP1Q7L576 1253 aa6.01□□□□□ -1.45
VPS13A-209ENST00000467124 C19orf47Q8N9M1 422 aaKnown RBP6.01□□□□□ -1.45
VPS13A-209ENST00000467124 TMEM40Q8WWA1 233 aa6.01□□□□□ -1.45
VPS13A-209ENST00000467124 DPH2Q9BQC3 489 aaPredicted RBP6.01□□□□□ -1.45
VPS13A-209ENST00000467124 ATXN3LQ9H3M9 355 aa6.01□□□□□ -1.45
VPS13A-209ENST00000467124 HIF3AQ9Y2N7 669 aa6.01□□□□□ -1.45
VPS13A-209ENST00000467124 ESYT3A0FGR9 886 aa6□□□□□ -1.45
VPS13A-209ENST00000467124 SLC22A31A6NKX4 558 aa6□□□□□ -1.45
VPS13A-209ENST00000467124 RBAK-RBAKDNI3L0D1 243 aa6□□□□□ -1.45
VPS13A-209ENST00000467124 DIAPH1O60610 1272 aaKnown RBP6□□□□□ -1.45
VPS13A-209ENST00000467124 ACRP10323 421 aa6□□□□□ -1.45
VPS13A-209ENST00000467124 ADH5P11766 374 aa6□□□□□ -1.45
VPS13A-209ENST00000467124 LORP23490 312 aaPredicted RBP6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms