RNA–Protein interactions for RNA: ENST00000466732.2

VPS13D-203, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 5

Gene VPS13D, Length 377 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-203ENST00000466732 RELL1Q8IUW5 271 aa6.82□□□□□ -1.32
VPS13D-203ENST00000466732 ZNF507Q8TCN5 953 aa6.82□□□□□ -1.32
VPS13D-203ENST00000466732 JARID2Q92833 1246 aaPredicted RBP6.82□□□□□ -1.32
VPS13D-203ENST00000466732 RSRP1Q9BUV0 290 aa6.82□□□□□ -1.32
VPS13D-203ENST00000466732 GFRA2O00451 464 aa6.81□□□□□ -1.32
VPS13D-203ENST00000466732 LEFTY1O75610 366 aa6.81□□□□□ -1.32
VPS13D-203ENST00000466732 CAMK2GQ13555 558 aaPredicted RBP6.81□□□□□ -1.32
VPS13D-203ENST00000466732 MSMPQ1L6U9 139 aa6.81□□□□□ -1.32
VPS13D-203ENST00000466732 TSNAXIP1Q2TAA8 658 aa6.81□□□□□ -1.32
VPS13D-203ENST00000466732 CYP27C1Q4G0S4 372 aa6.81□□□□□ -1.32
VPS13D-203ENST00000466732 CDC37L1Q7L3B6 337 aa6.81□□□□□ -1.32
VPS13D-203ENST00000466732 TOP6BLQ8N6T0 577 aa6.81□□□□□ -1.32
VPS13D-203ENST00000466732 KCT2Q8NC54 265 aa6.81□□□□□ -1.32
VPS13D-203ENST00000466732 TMEM74Q96NL1 305 aa6.81□□□□□ -1.32
VPS13D-203ENST00000466732 DUSP23Q9BVJ7 150 aa6.81□□□□□ -1.32
VPS13D-203ENST00000466732 WNT10AQ9GZT5 417 aa6.81□□□□□ -1.32
VPS13D-203ENST00000466732 LRRC4CQ9HCJ2 640 aa6.81□□□□□ -1.32
VPS13D-203ENST00000466732 RBM47A0AV96 593 aaKnown RBP6.8□□□□□ -1.32
VPS13D-203ENST00000466732 PF4P02776 101 aa6.8□□□□□ -1.32
VPS13D-203ENST00000466732 GBP2P32456 591 aaPredicted RBP6.8□□□□□ -1.32
VPS13D-203ENST00000466732 LMNB2Q03252 620 aa6.8□□□□□ -1.32
VPS13D-203ENST00000466732 PWP1Q13610 501 aa6.8□□□□□ -1.32
VPS13D-203ENST00000466732 BNC2Q6ZN30 1099 aaPredicted RBP6.8□□□□□ -1.32
VPS13D-203ENST00000466732 NBPF11Q86T75 865 aa6.8□□□□□ -1.32
VPS13D-203ENST00000466732 CCDC84Q86UT8 332 aaPredicted RBP6.8□□□□□ -1.32
VPS13D-203ENST00000466732 RHOVQ96L33 236 aa6.8□□□□□ -1.32
VPS13D-203ENST00000466732 FBRSQ9HAH7 460 aa6.8□□□□□ -1.32
VPS13D-203ENST00000466732 GRK4P32298 578 aa6.79□□□□□ -1.32
VPS13D-203ENST00000466732 ETF1P62495 437 aaKnown RBP6.79□□□□□ -1.32
VPS13D-203ENST00000466732 RPL6Q02878 288 aaKnown RBP6.79□□□□□ -1.32
VPS13D-203ENST00000466732 LDLRAD1Q5T700 205 aa6.79□□□□□ -1.32
VPS13D-203ENST00000466732 ERMP1Q7Z2K6 904 aa6.79□□□□□ -1.32
VPS13D-203ENST00000466732 COPRSQ9NQ92 184 aa6.79□□□□□ -1.32
VPS13D-203ENST00000466732 ZC3H7BQ9UGR2 993 aaKnown RBP6.79□□□□□ -1.32
VPS13D-203ENST00000466732 TACC3Q9Y6A5 838 aa6.79□□□□□ -1.32
VPS13D-203ENST00000466732 MINDY4BA8MYZ0 360 aa6.78□□□□□ -1.32
VPS13D-203ENST00000466732 ADAMTS4O75173 837 aa6.78□□□□□ -1.32
VPS13D-203ENST00000466732 SLBPQ14493 270 aaKnown RBP eCLIP6.78□□□□□ -1.32
VPS13D-203ENST00000466732 NKG7Q16617 165 aa6.78□□□□□ -1.32
VPS13D-203ENST00000466732 ARMCX6Q7L4S7 300 aa6.78□□□□□ -1.32
VPS13D-203ENST00000466732 PRDM10Q9NQV6 1147 aa6.78□□□□□ -1.32
VPS13D-203ENST00000466732 KBTBD4Q9NVX7 518 aa6.78□□□□□ -1.32
VPS13D-203ENST00000466732 FAM221AA4D161 298 aa6.77□□□□□ -1.33
VPS13D-203ENST00000466732 CILPO75339 1184 aa6.77□□□□□ -1.33
VPS13D-203ENST00000466732 LRIG2O94898 1065 aa6.77□□□□□ -1.33
VPS13D-203ENST00000466732 F13A1P00488 732 aa6.77□□□□□ -1.33
VPS13D-203ENST00000466732 FAM160A1Q05DH4 1040 aa6.77□□□□□ -1.33
VPS13D-203ENST00000466732 DIEXFQ68CQ4 756 aaKnown RBP6.77□□□□□ -1.33
VPS13D-203ENST00000466732 HID1Q8IV36 788 aa6.77□□□□□ -1.33
VPS13D-203ENST00000466732 TMEM87AQ8NBN3 555 aa6.77□□□□□ -1.33
VPS13D-203ENST00000466732 GATAD2BQ8WXI9 593 aa6.77□□□□□ -1.33
VPS13D-203ENST00000466732 PRNPP04156 253 aa6.76□□□□□ -1.33
VPS13D-203ENST00000466732 GARTP22102 1010 aa6.76□□□□□ -1.33
VPS13D-203ENST00000466732 CAP2P40123 477 aa6.76□□□□□ -1.33
VPS13D-203ENST00000466732 SNAP47Q5SQN1 464 aa6.76□□□□□ -1.33
VPS13D-203ENST00000466732 FAM214BQ7L5A3 538 aa6.76□□□□□ -1.33
VPS13D-203ENST00000466732 HS2ST1Q7LGA3 356 aa6.76□□□□□ -1.33
VPS13D-203ENST00000466732 FAM181AQ8N9Y4 354 aa6.76□□□□□ -1.33
VPS13D-203ENST00000466732 GOLM1Q8NBJ4 401 aa6.76□□□□□ -1.33
VPS13D-203ENST00000466732 BACH2Q9BYV9 841 aa6.76□□□□□ -1.33
VPS13D-203ENST00000466732 FOXQ1Q9C009 403 aa6.76□□□□□ -1.33
VPS13D-203ENST00000466732 GGT7Q9UJ14 662 aa6.76□□□□□ -1.33
VPS13D-203ENST00000466732 U3KQE9 123 aa6.76□□□□□ -1.33
VPS13D-203ENST00000466732 BPNT1O95861 308 aa6.75□□□□□ -1.33
VPS13D-203ENST00000466732 EOMESO95936 686 aa6.75□□□□□ -1.33
VPS13D-203ENST00000466732 WNT11O96014 354 aa6.75□□□□□ -1.33
VPS13D-203ENST00000466732 PGRP06401 933 aa6.75□□□□□ -1.33
VPS13D-203ENST00000466732 PDE4BQ07343 736 aa6.75□□□□□ -1.33
VPS13D-203ENST00000466732 HEXIM2Q96MH2 286 aaKnown RBP6.75□□□□□ -1.33
VPS13D-203ENST00000466732 BSDC1Q9NW68 430 aaPredicted RBP6.75□□□□□ -1.33
VPS13D-203ENST00000466732 TJP2Q9UDY2 1190 aa6.75□□□□□ -1.33
VPS13D-203ENST00000466732 CCDC39Q9UFE4 941 aa6.75□□□□□ -1.33
VPS13D-203ENST00000466732 SLITRK5O94991 958 aa6.74□□□□□ -1.33
VPS13D-203ENST00000466732 CST3P01034 146 aaPredicted RBP6.74□□□□□ -1.33
VPS13D-203ENST00000466732 OXCT1P55809 520 aa6.74□□□□□ -1.33
VPS13D-203ENST00000466732 PRAMEF13Q5VWM6 474 aa6.74□□□□□ -1.33
VPS13D-203ENST00000466732 FBXL19Q6PCT2 694 aa6.74□□□□□ -1.33
VPS13D-203ENST00000466732 PLD6Q8N2A8 252 aaKnown RBP6.74□□□□□ -1.33
VPS13D-203ENST00000466732 MFSD2AQ8NA29 543 aa6.74□□□□□ -1.33
VPS13D-203ENST00000466732 RGS22Q8NE09 1264 aa6.74□□□□□ -1.33
VPS13D-203ENST00000466732 MKNK2Q9HBH9 465 aa6.74□□□□□ -1.33
VPS13D-203ENST00000466732 KCNQ5Q9NR82 932 aa6.74□□□□□ -1.33
VPS13D-203ENST00000466732 GTF2IRD1Q9UHL9 959 aa6.74□□□□□ -1.33
VPS13D-203ENST00000466732 CORINQ9Y5Q5 1042 aa6.74□□□□□ -1.33
VPS13D-203ENST00000466732 EIF4A3P38919 411 aaKnown RBP6.73□□□□□ -1.33
VPS13D-203ENST00000466732 GP2P55259 537 aaKnown RBP6.73□□□□□ -1.33
VPS13D-203ENST00000466732 MPP2Q14168 576 aa6.73□□□□□ -1.33
VPS13D-203ENST00000466732 FAM196AQ6ZSG2 479 aa6.73□□□□□ -1.33
VPS13D-203ENST00000466732 ARHGAP27Q6ZUM4 889 aa6.73□□□□□ -1.33
VPS13D-203ENST00000466732 VSIG10LQ86VR7 867 aa6.73□□□□□ -1.33
VPS13D-203ENST00000466732 MRPL41Q8IXM3 137 aaKnown RBP6.73□□□□□ -1.33
VPS13D-203ENST00000466732 FBXO27Q8NI29 283 aa6.73□□□□□ -1.33
VPS13D-203ENST00000466732 NETO1Q8TDF5 533 aa6.73□□□□□ -1.33
VPS13D-203ENST00000466732 XAGE3Q8WTP9 111 aa6.73□□□□□ -1.33
VPS13D-203ENST00000466732 TMEM87BQ96K49 555 aa6.73□□□□□ -1.33
VPS13D-203ENST00000466732 MIPEPQ99797 713 aa6.73□□□□□ -1.33
VPS13D-203ENST00000466732 ADAM30Q9UKF2 790 aa6.73□□□□□ -1.33
VPS13D-203ENST00000466732 ANGEL1Q9UNK9 670 aaKnown RBP6.73□□□□□ -1.33
VPS13D-203ENST00000466732 IGF2BP3O00425 579 aaKnown RBP eCLIP6.72□□□□□ -1.33
VPS13D-203ENST00000466732 CEACAM5P06731 702 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms