RNA–Protein interactions for RNA: ENST00000466613.2

SDHB-203, Transcript of succinate dehydrogenase complex iron sulfur subunit B, humanhuman

TSL 2

Gene SDHB, Length 828 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHB-203ENST00000466613 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.28■□□□□ 0.84
SDHB-203ENST00000466613 AFG3L2Q9Y4W6 797 aa20.28■□□□□ 0.84
SDHB-203ENST00000466613 A0A0G2JLL6 359 aaPredicted RBP20.27■□□□□ 0.84
SDHB-203ENST00000466613 PDHXO00330 501 aa20.27■□□□□ 0.84
SDHB-203ENST00000466613 SOX10P56693 466 aa20.27■□□□□ 0.84
SDHB-203ENST00000466613 CAP1Q01518 475 aa20.27■□□□□ 0.84
SDHB-203ENST00000466613 MLLT1Q03111 559 aaPredicted RBP20.27■□□□□ 0.84
SDHB-203ENST00000466613 PRRT2Q7Z6L0 340 aaPredicted RBP20.27■□□□□ 0.84
SDHB-203ENST00000466613 CERS3Q8IU89 383 aa20.27■□□□□ 0.84
SDHB-203ENST00000466613 MAPKAPK5Q8IW41 473 aa20.27■□□□□ 0.84
SDHB-203ENST00000466613 PI4KBQ9UBF8 816 aa20.27■□□□□ 0.84
SDHB-203ENST00000466613 HERC5Q9UII4 1024 aaKnown RBP20.27■□□□□ 0.84
SDHB-203ENST00000466613 DYNLL1P63167 89 aaKnown RBP20.26■□□□□ 0.83
SDHB-203ENST00000466613 TTF1Q15361 905 aaPredicted RBP20.26■□□□□ 0.83
SDHB-203ENST00000466613 MIGA1Q8NAN2 632 aa20.26■□□□□ 0.83
SDHB-203ENST00000466613 FRMD4AQ9P2Q2 1039 aaPredicted RBP20.26■□□□□ 0.83
SDHB-203ENST00000466613 PTPN22Q9Y2R2 807 aa20.26■□□□□ 0.83
SDHB-203ENST00000466613 ARHGEF6Q15052 776 aa20.25■□□□□ 0.83
SDHB-203ENST00000466613 GPAT2Q6NUI2 795 aa20.25■□□□□ 0.83
SDHB-203ENST00000466613 FASTKD5Q7L8L6 764 aaKnown RBP20.25■□□□□ 0.83
SDHB-203ENST00000466613 BCL11AQ9H165 835 aa20.25■□□□□ 0.83
SDHB-203ENST00000466613 CENPFP49454 3210 aa20.25■□□□□ 0.83
SDHB-203ENST00000466613 LOC285556D6RIA3 1793 aa20.25■□□□□ 0.83
SDHB-203ENST00000466613 ADGRA2Q96PE1 1338 aa20.25■□□□□ 0.83
SDHB-203ENST00000466613 NAV1Q8NEY1 1877 aa20.24■□□□□ 0.83
SDHB-203ENST00000466613 MYH7P12883 1935 aa20.24■□□□□ 0.83
SDHB-203ENST00000466613 CAP2P40123 477 aa20.24■□□□□ 0.83
SDHB-203ENST00000466613 C17orf99Q6UX52 265 aa20.24■□□□□ 0.83
SDHB-203ENST00000466613 CCDC84Q86UT8 332 aaPredicted RBP20.24■□□□□ 0.83
SDHB-203ENST00000466613 PARK7Q99497 189 aaKnown RBP20.24■□□□□ 0.83
SDHB-203ENST00000466613 DDX60LQ5H9U9 1706 aaKnown RBP20.24■□□□□ 0.83
SDHB-203ENST00000466613 TRIM75PA6NK02 468 aa20.23■□□□□ 0.83
SDHB-203ENST00000466613 LACTBP83111 547 aaPredicted RBP20.23■□□□□ 0.83
SDHB-203ENST00000466613 RRP1BQ14684 758 aaKnown RBP20.23■□□□□ 0.83
SDHB-203ENST00000466613 KIF22Q14807 665 aa20.23■□□□□ 0.83
SDHB-203ENST00000466613 METTL16Q86W50 562 aaKnown RBP20.23■□□□□ 0.83
SDHB-203ENST00000466613 DNAJC2Q99543 621 aaKnown RBP20.23■□□□□ 0.83
SDHB-203ENST00000466613 TBC1D2Q9BYX2 928 aa20.23■□□□□ 0.83
SDHB-203ENST00000466613 LRRCC1Q9C099 1032 aa20.23■□□□□ 0.83
SDHB-203ENST00000466613 CPA4Q9UI42 421 aa20.23■□□□□ 0.83
SDHB-203ENST00000466613 PALD1Q9ULE6 856 aa20.23■□□□□ 0.83
SDHB-203ENST00000466613 MGAMO43451 1857 aa20.22■□□□□ 0.83
SDHB-203ENST00000466613 GOLIM4O00461 696 aa20.22■□□□□ 0.83
SDHB-203ENST00000466613 TNRC18O15417 2968 aaPredicted RBP20.22■□□□□ 0.83
SDHB-203ENST00000466613 HLA-DOAP06340 250 aa20.22■□□□□ 0.83
SDHB-203ENST00000466613 USP5P45974 858 aa20.22■□□□□ 0.83
SDHB-203ENST00000466613 GADL1Q6ZQY3 521 aa20.22■□□□□ 0.83
SDHB-203ENST00000466613 FOXP4Q8IVH2 680 aaPredicted RBP20.22■□□□□ 0.83
SDHB-203ENST00000466613 DNAJC18Q9H819 358 aa20.22■□□□□ 0.83
SDHB-203ENST00000466613 SAP30BPQ9UHR5 308 aaKnown RBP20.22■□□□□ 0.83
SDHB-203ENST00000466613 SLC45A1Q9Y2W3 748 aa20.22■□□□□ 0.83
SDHB-203ENST00000466613 RBBP6Q7Z6E9 1792 aaKnown RBP20.21■□□□□ 0.83
SDHB-203ENST00000466613 PDE6AP16499 860 aa20.21■□□□□ 0.83
SDHB-203ENST00000466613 CRACR2BQ8N4Y2 399 aaPredicted RBP20.21■□□□□ 0.83
SDHB-203ENST00000466613 RIOK1Q9BRS2 568 aaKnown RBP20.21■□□□□ 0.83
SDHB-203ENST00000466613 TRIM34Q9BYJ4 488 aa20.21■□□□□ 0.83
SDHB-203ENST00000466613 ARHGAP39Q9C0H5 1083 aa20.21■□□□□ 0.83
SDHB-203ENST00000466613 CYP2C8P10632 490 aa20.2■□□□□ 0.82
SDHB-203ENST00000466613 ATP5JP18859 108 aa20.2■□□□□ 0.82
SDHB-203ENST00000466613 SLC9C2Q5TAH2 1124 aa20.2■□□□□ 0.82
SDHB-203ENST00000466613 ZNF280CQ8ND82 737 aa20.2■□□□□ 0.82
SDHB-203ENST00000466613 BOLA2Q9H3K6 86 aa20.2■□□□□ 0.82
SDHB-203ENST00000466613 MAGEB6P1A0A0J9YX57 407 aa20.19■□□□□ 0.82
SDHB-203ENST00000466613 USP17L5A8MUK1 530 aa20.19■□□□□ 0.82
SDHB-203ENST00000466613 GNRH1P01148 92 aa20.19■□□□□ 0.82
SDHB-203ENST00000466613 SPP2Q13103 211 aa20.19■□□□□ 0.82
SDHB-203ENST00000466613 ARMC5Q96C12 935 aa20.19■□□□□ 0.82
SDHB-203ENST00000466613 EDC3Q96F86 508 aaKnown RBP20.19■□□□□ 0.82
SDHB-203ENST00000466613 AS3MTQ9HBK9 375 aa20.19■□□□□ 0.82
SDHB-203ENST00000466613 PAG1Q9NWQ8 432 aa20.19■□□□□ 0.82
SDHB-203ENST00000466613 AGTPBP1Q9UPW5 1226 aa20.19■□□□□ 0.82
SDHB-203ENST00000466613 ZNF532Q9HCE3 1301 aa20.19■□□□□ 0.82
SDHB-203ENST00000466613 SMARCA5O60264 1052 aaPredicted RBP20.18■□□□□ 0.82
SDHB-203ENST00000466613 ASNSP08243 561 aa20.18■□□□□ 0.82
SDHB-203ENST00000466613 BCRP11274 1271 aa20.18■□□□□ 0.82
SDHB-203ENST00000466613 RRP1P56182 461 aaKnown RBP20.18■□□□□ 0.82
SDHB-203ENST00000466613 SLC4A8Q2Y0W8 1093 aa20.18■□□□□ 0.82
SDHB-203ENST00000466613 PROCA1Q8NCQ7 364 aaPredicted RBP20.18■□□□□ 0.82
SDHB-203ENST00000466613 HAUS7Q99871 368 aa20.18■□□□□ 0.82
SDHB-203ENST00000466613 DCTPP1Q9H773 170 aa20.18■□□□□ 0.82
SDHB-203ENST00000466613 GINM1Q9NU53 330 aa20.18■□□□□ 0.82
SDHB-203ENST00000466613 PTCH2Q9Y6C5 1203 aa20.18■□□□□ 0.82
SDHB-203ENST00000466613 TCRBV5S4A2TA0A5A2 114 aa20.17■□□□□ 0.82
SDHB-203ENST00000466613 CTGFP29279 349 aa20.17■□□□□ 0.82
SDHB-203ENST00000466613 TREML2Q5T2D2 321 aa20.17■□□□□ 0.82
SDHB-203ENST00000466613 EHD4Q9H223 541 aa20.17■□□□□ 0.82
SDHB-203ENST00000466613 GDF11O95390 407 aa20.16■□□□□ 0.82
SDHB-203ENST00000466613 PSMC4P43686 418 aa20.16■□□□□ 0.82
SDHB-203ENST00000466613 HMGCS2P54868 508 aa20.16■□□□□ 0.82
SDHB-203ENST00000466613 PRMT2P55345 433 aa20.16■□□□□ 0.82
SDHB-203ENST00000466613 WDR18Q9BV38 432 aa20.16■□□□□ 0.82
SDHB-203ENST00000466613 SERPINB13Q9UIV8 391 aa20.16■□□□□ 0.82
SDHB-203ENST00000466613 PNMA3Q9UL41 463 aa20.16■□□□□ 0.82
SDHB-203ENST00000466613 BRCA2P51587 3418 aa20.16■□□□□ 0.82
SDHB-203ENST00000466613 ECM2O94769 699 aaPredicted RBP20.15■□□□□ 0.82
SDHB-203ENST00000466613 JAG1P78504 1218 aa20.15■□□□□ 0.82
SDHB-203ENST00000466613 SLC9C1Q4G0N8 1177 aa20.15■□□□□ 0.82
SDHB-203ENST00000466613 SH3D19Q5HYK7 790 aa20.15■□□□□ 0.82
SDHB-203ENST00000466613 TTC6Q86TZ1 520 aa20.15■□□□□ 0.82
SDHB-203ENST00000466613 SMCR8Q8TEV9 937 aaPredicted RBP20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms