RNA–Protein interactions for RNA: ENST00000465461.6

CUX1-207, Transcript of cut like homeobox 1, humanhuman

TSL 3

Gene CUX1, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-207ENST00000465461 HSPA1AP0DMV8 641 aaKnown RBP14.04□□□□□ -0.16
CUX1-207ENST00000465461 HSPA1BP0DMV9 641 aaKnown RBP14.04□□□□□ -0.16
CUX1-207ENST00000465461 MAP2K2P36507 400 aa14.04□□□□□ -0.16
CUX1-207ENST00000465461 PLCD1P51178 756 aa14.04□□□□□ -0.16
CUX1-207ENST00000465461 NOGQ13253 232 aa14.04□□□□□ -0.16
CUX1-207ENST00000465461 CENPQQ7L2Z9 268 aaPredicted RBP14.04□□□□□ -0.16
CUX1-207ENST00000465461 CCDC84Q86UT8 332 aaPredicted RBP14.04□□□□□ -0.16
CUX1-207ENST00000465461 OTUD5Q96G74 571 aa14.04□□□□□ -0.16
CUX1-207ENST00000465461 STRBPQ96SI9 672 aaKnown RBP14.04□□□□□ -0.16
CUX1-207ENST00000465461 DNAJC18Q9H819 358 aa14.04□□□□□ -0.16
CUX1-207ENST00000465461 DCP1AQ9NPI6 582 aaPredicted RBP14.04□□□□□ -0.16
CUX1-207ENST00000465461 PI4KBQ9UBF8 816 aa14.04□□□□□ -0.16
CUX1-207ENST00000465461 CYP2D7A0A087X1C5 515 aa14.03□□□□□ -0.16
CUX1-207ENST00000465461 GPAA1O43292 621 aa14.03□□□□□ -0.16
CUX1-207ENST00000465461 POLR3DP05423 398 aaPredicted RBP14.03□□□□□ -0.16
CUX1-207ENST00000465461 GSPT1P15170 499 aaKnown RBP14.03□□□□□ -0.16
CUX1-207ENST00000465461 MAP3K10Q02779 954 aa14.03□□□□□ -0.16
CUX1-207ENST00000465461 SHROOM1Q2M3G4 852 aaPredicted RBP14.03□□□□□ -0.16
CUX1-207ENST00000465461 ZMYM1Q5SVZ6 1142 aa14.03□□□□□ -0.16
CUX1-207ENST00000465461 CERS3Q8IU89 383 aa14.03□□□□□ -0.16
CUX1-207ENST00000465461 FAM227BQ96M60 508 aa14.03□□□□□ -0.16
CUX1-207ENST00000465461 DHX36Q9H2U1 1008 aaKnown RBP14.03□□□□□ -0.16
CUX1-207ENST00000465461 TSKSQ9UJT2 592 aa14.03□□□□□ -0.16
CUX1-207ENST00000465461 COL2A1P02458 1487 aaPredicted RBP14.03□□□□□ -0.16
CUX1-207ENST00000465461 NAV1Q8NEY1 1877 aa14.02□□□□□ -0.16
CUX1-207ENST00000465461 THSD7BQ9C0I4 1608 aa14.02□□□□□ -0.16
CUX1-207ENST00000465461 TBC1D12O60347 775 aa14.02□□□□□ -0.17
CUX1-207ENST00000465461 HLA-DOAP06340 250 aa14.02□□□□□ -0.17
CUX1-207ENST00000465461 JAG1P78504 1218 aa14.02□□□□□ -0.17
CUX1-207ENST00000465461 NMIQ13287 307 aaPredicted RBP14.02□□□□□ -0.17
CUX1-207ENST00000465461 TTC22Q5TAA0 569 aa14.02□□□□□ -0.17
CUX1-207ENST00000465461 STK11IPQ8N1F8 1099 aa14.02□□□□□ -0.17
CUX1-207ENST00000465461 CRACR2BQ8N4Y2 399 aaPredicted RBP14.02□□□□□ -0.17
CUX1-207ENST00000465461 WBP1LQ9NX94 342 aa14.02□□□□□ -0.17
CUX1-207ENST00000465461 BAZ2AQ9UIF9 1905 aaKnown RBP14.02□□□□□ -0.17
CUX1-207ENST00000465461 A0A0D9SFI3 127 aa14.01□□□□□ -0.17
CUX1-207ENST00000465461 SPDYE5A6NIY4 337 aa14.01□□□□□ -0.17
CUX1-207ENST00000465461 GSG1L2A8MUP6 293 aa14.01□□□□□ -0.17
CUX1-207ENST00000465461 GDF11O95390 407 aa14.01□□□□□ -0.17
CUX1-207ENST00000465461 SDSP20132 328 aa14.01□□□□□ -0.17
CUX1-207ENST00000465461 LRRFIP1Q32MZ4 808 aaKnown RBP14.01□□□□□ -0.17
CUX1-207ENST00000465461 FOXP4Q8IVH2 680 aaPredicted RBP14.01□□□□□ -0.17
CUX1-207ENST00000465461 SCYL3Q8IZE3 742 aa14.01□□□□□ -0.17
CUX1-207ENST00000465461 DYNLL2Q96FJ2 89 aa14.01□□□□□ -0.17
CUX1-207ENST00000465461 TRIM34Q9BYJ4 488 aa14.01□□□□□ -0.17
CUX1-207ENST00000465461 UNCXA6NJT0 531 aa14□□□□□ -0.17
CUX1-207ENST00000465461 USP17L12C9JPN9 530 aa14□□□□□ -0.17
CUX1-207ENST00000465461 USP17L21D6R901 530 aa14□□□□□ -0.17
CUX1-207ENST00000465461 IRF6O14896 467 aa14□□□□□ -0.17
CUX1-207ENST00000465461 FOXN1O15353 648 aa14□□□□□ -0.17
CUX1-207ENST00000465461 APPP05067 770 aa14□□□□□ -0.17
CUX1-207ENST00000465461 MAP2K1Q02750 393 aaPredicted RBP14□□□□□ -0.17
CUX1-207ENST00000465461 NOL9Q5SY16 702 aaKnown RBP14□□□□□ -0.17
CUX1-207ENST00000465461 VPS53Q5VIR6 699 aa14□□□□□ -0.17
CUX1-207ENST00000465461 CTR9Q6PD62 1173 aa14□□□□□ -0.17
CUX1-207ENST00000465461 TTC6Q86TZ1 520 aa14□□□□□ -0.17
CUX1-207ENST00000465461 ERO1BQ86YB8 467 aa14□□□□□ -0.17
CUX1-207ENST00000465461 SLC44A5Q8NCS7 719 aa14□□□□□ -0.17
CUX1-207ENST00000465461 EPB41L4AQ9HCS5 686 aaPredicted RBP14□□□□□ -0.17
CUX1-207ENST00000465461 ATP8A2Q9NTI2 1148 aa14□□□□□ -0.17
CUX1-207ENST00000465461 HERC5Q9UII4 1024 aaKnown RBP14□□□□□ -0.17
CUX1-207ENST00000465461 DDX60LQ5H9U9 1706 aaKnown RBP14□□□□□ -0.17
CUX1-207ENST00000465461 CTNND1O60716 968 aaKnown RBP13.99□□□□□ -0.17
CUX1-207ENST00000465461 ZBTB48P10074 688 aaPredicted RBP13.99□□□□□ -0.17
CUX1-207ENST00000465461 PTPRAP18433 802 aa13.99□□□□□ -0.17
CUX1-207ENST00000465461 CAP2P40123 477 aa13.99□□□□□ -0.17
CUX1-207ENST00000465461 ZNF589Q86UQ0 364 aaPredicted RBP13.99□□□□□ -0.17
CUX1-207ENST00000465461 METTL16Q86W50 562 aaKnown RBP13.99□□□□□ -0.17
CUX1-207ENST00000465461 PICK1Q9NRD5 415 aa13.99□□□□□ -0.17
CUX1-207ENST00000465461 SERPINB13Q9UIV8 391 aa13.99□□□□□ -0.17
CUX1-207ENST00000465461 MINDY4BA8MYZ0 360 aa13.98□□□□□ -0.17
CUX1-207ENST00000465461 PATL2C9JE40 543 aaKnown RBP13.98□□□□□ -0.17
CUX1-207ENST00000465461 FOXP2O15409 715 aa13.98□□□□□ -0.17
CUX1-207ENST00000465461 TRPA1O75762 1119 aa13.98□□□□□ -0.17
CUX1-207ENST00000465461 TM4SF4P48230 202 aa13.98□□□□□ -0.17
CUX1-207ENST00000465461 MCMDC2Q4G0Z9 681 aa13.98□□□□□ -0.17
CUX1-207ENST00000465461 C12orf60Q5U649 245 aa13.98□□□□□ -0.17
CUX1-207ENST00000465461 CWC27Q6UX04 472 aaKnown RBP13.98□□□□□ -0.17
CUX1-207ENST00000465461 IFNL3Q8IZI9 196 aa13.98□□□□□ -0.17
CUX1-207ENST00000465461 MS4A4AQ96JQ5 239 aa13.98□□□□□ -0.17
CUX1-207ENST00000465461 PTPN18Q99952 460 aa13.98□□□□□ -0.17
CUX1-207ENST00000465461 HELLSQ9NRZ9 838 aa13.98□□□□□ -0.17
CUX1-207ENST00000465461 RNF186Q9NXI6 227 aa13.98□□□□□ -0.17
CUX1-207ENST00000465461 ZHX2Q9Y6X8 837 aa13.98□□□□□ -0.17
CUX1-207ENST00000465461 DOCK1Q14185 1865 aa13.97□□□□□ -0.17
CUX1-207ENST00000465461 CCL15-CCL14A0A0B4J2E2 113 aa13.97□□□□□ -0.17
CUX1-207ENST00000465461 MANSC4A6NHS7 340 aaPredicted RBP13.97□□□□□ -0.17
CUX1-207ENST00000465461 IGF2BP3O00425 579 aaKnown RBP eCLIP13.97□□□□□ -0.17
CUX1-207ENST00000465461 SHMT1P34896 483 aa13.97□□□□□ -0.17
CUX1-207ENST00000465461 TDO2P48775 406 aa13.97□□□□□ -0.17
CUX1-207ENST00000465461 PPATQ06203 517 aa13.97□□□□□ -0.17
CUX1-207ENST00000465461 GABPAQ06546 454 aa13.97□□□□□ -0.17
CUX1-207ENST00000465461 PPIL2Q13356 520 aa13.97□□□□□ -0.17
CUX1-207ENST00000465461 CCL15Q16663 113 aa13.97□□□□□ -0.17
CUX1-207ENST00000465461 TATDN1Q6P1N9 297 aa13.97□□□□□ -0.17
CUX1-207ENST00000465461 BRI3BPQ8WY22 251 aa13.97□□□□□ -0.17
CUX1-207ENST00000465461 DDRGK1Q96HY6 314 aa13.97□□□□□ -0.17
CUX1-207ENST00000465461 BEGAINQ9BUH8 593 aa13.97□□□□□ -0.17
CUX1-207ENST00000465461 EHD4Q9H223 541 aa13.97□□□□□ -0.17
CUX1-207ENST00000465461 IL25Q9H293 177 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms